Thermochaetoides thermophila: CTHT_0010050
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Entry
CTHT_0010050 CDS
T03100
Name
(RefSeq) putative RNA splicing factor
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
cthr
Thermochaetoides thermophila
Pathway
cthr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CTHT_0010050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cthr03041
]
CTHT_0010050
Spliceosome [BR:
cthr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
CTHT_0010050
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
18255043
NCBI-ProteinID:
XP_006691528
UniProt:
G0S0H6
LinkDB
All DBs
Position
Unknown
AA seq
607 aa
AA seq
DB search
MSTLADELLQDFEGSGSEAGEDLNEDFFNEAGLPGATAANGEDTAMEEVRDEDEDEDQEM
QDGDANGLGDESGEDAKAKIEKMQLGGIKDVRSVATLMKTLTPVLEKIAYFQSQPSTENV
GNVEDHPEYHLLTQSNSLSTQIDNEIMLVHKFIRDHYSVRFPELETLISNPVEYAKVVAI
LGNGPFDSESIKKIQTSTDNPLGVTLKSVLDGPSLMIVTVEATTSKGQAMPPEQLQRVVK
ACEMVIDLDKAKKTLTDYVQSRMNIFAPNLTALIGSLTAAQLLNQAGGLTALSKTPACNL
PAWGSKKQATAALATNVGIRHQGFIYQSPIIRTIPSDLKKQAIKMFANKIVMCARSDCFH
QFRDGSEGERLREECLERLDKLQQKPLSKSARPLPAPDDKPSRKRGGRRVRKAKEAYAMT
ELRKAQNRMAFGKEEKEVGYGTGDHTTGLGMLGLSDGRLRVAQIDNRTRAKLSQKHKGWG
GVSSISGNASSLRSSLTGGAGKLNLAAASAQGLRTSGVGTTVGSATGLATSGTISSLKFA
SASGLELVDPKLQAELSRKRKAEEDRWFKSGAFTQIGNKNNSGDGVFKKPDLPPSKRIDT
GATKSQN
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccctagccgacgagctgcttcaagattttgagggctccggctcagaagccggg
gaggatctcaatgaggacttcttcaacgaggctggtcttcccggcgcaacagcggccaat
ggcgaggacacagcaatggaggaagtgcgtgatgaggacgaggacgaagaccaggagatg
caagatggcgacgcgaacggcctcggggacgagagcggcgaggatgcaaaagcaaaaatc
gagaagatgcagctaggaggcatcaaggatgtccgtagcgtcgcgacattgatgaagacg
ctgacacctgtgctcgagaaaatcgcatacttccaatcacagccctcaaccgagaacgtg
ggcaacgtagaagaccatcccgagtaccatcttctgacccaatcgaacagcctgtccacc
cagatcgacaacgagatcatgctcgtgcacaagttcatccgcgaccactactccgttcgg
ttcccggagctggagacgctgatttcgaaccccgtcgagtatgcgaaggtggttgcgata
ctgggcaacgggcccttcgactcggagagcatcaaaaagatccagacctcgaccgataac
ccgctgggcgtgacgctcaagtccgttctcgacggcccgtctctgatgatcgtcacggtg
gaggctacgacatctaaaggccaagccatgccaccagagcagctgcagcgagtcgtcaag
gcatgcgagatggttatcgacctggacaaggccaagaagaccttgacagattatgtccag
tcgcgcatgaatatcttcgcaccgaacttgacagctctcatcggctcgctgacggctgct
cagctgctcaaccaagccggtggccttaccgccctctccaagactccggcgtgcaatttg
cccgcctggggctccaagaagcaggctaccgcagcgttggcaactaacgtcggcatccgg
catcaaggcttcatctaccagtcccccatcatccgcaccatccccagcgacctcaagaag
caagctatcaagatgtttgccaataagatcgtcatgtgcgcccgcagcgactgcttccat
caattccgcgacggctccgagggcgaacgcttgcgtgaagaatgcctggagcgcctcgac
aagctccagcaaaagcccctctcaaaatcggcccggccactgcccgcacccgatgacaag
cccagccgcaagcgcggcggtcgccgcgtgcgcaaagccaaagaagcctatgcaatgact
gagctgcgcaaggcgcagaatcgcatggcgttcggcaaggaagagaaagaggtgggctac
ggcacgggtgaccacactaccggtctcggtatgctgggtctcagcgacggccggctgcgc
gttgcgcagattgataaccgcacgcgcgccaagctcagccagaaacataaaggctgggga
ggcgtcagctcgatcagcgggaatgcatcgagcttgcggagcagtctaactggtggtgct
ggcaagctcaacttggctgcggctagcgctcaggggctgcggacgtcgggtgttggcacg
acggtgggcagtgcgacggggttggctacgtcgggtactatttcttcgctcaagttcgcg
tcggcgtcgggcctggagctggttgatccgaagctgcaggctgagctgagtaggaagagg
aaggccgaggaggatcgatggttcaagagcggtgcatttacgcagatcggaaataagaat
aatagcggcgatggggtatttaagaagcctgatctgccgccgagcaagaggattgatact
ggggcgacaaagtcgcagaattaa
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