KEGG   Thermochaetoides thermophila: CTHT_0010050
Entry
CTHT_0010050      CDS       T03100                                 
Name
(RefSeq) putative RNA splicing factor
  KO
K12844  U4/U6 small nuclear ribonucleoprotein PRP31
Organism
cthr  Thermochaetoides thermophila
Pathway
cthr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cthr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CTHT_0010050
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cthr03041]
    CTHT_0010050
Spliceosome [BR:cthr03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    CTHT_0010050
SSDB
Motif
Pfam: Nop Prp31_C
Other DBs
NCBI-GeneID: 18255043
NCBI-ProteinID: XP_006691528
UniProt: G0S0H6
LinkDB
Position
Unknown
AA seq 607 aa
MSTLADELLQDFEGSGSEAGEDLNEDFFNEAGLPGATAANGEDTAMEEVRDEDEDEDQEM
QDGDANGLGDESGEDAKAKIEKMQLGGIKDVRSVATLMKTLTPVLEKIAYFQSQPSTENV
GNVEDHPEYHLLTQSNSLSTQIDNEIMLVHKFIRDHYSVRFPELETLISNPVEYAKVVAI
LGNGPFDSESIKKIQTSTDNPLGVTLKSVLDGPSLMIVTVEATTSKGQAMPPEQLQRVVK
ACEMVIDLDKAKKTLTDYVQSRMNIFAPNLTALIGSLTAAQLLNQAGGLTALSKTPACNL
PAWGSKKQATAALATNVGIRHQGFIYQSPIIRTIPSDLKKQAIKMFANKIVMCARSDCFH
QFRDGSEGERLREECLERLDKLQQKPLSKSARPLPAPDDKPSRKRGGRRVRKAKEAYAMT
ELRKAQNRMAFGKEEKEVGYGTGDHTTGLGMLGLSDGRLRVAQIDNRTRAKLSQKHKGWG
GVSSISGNASSLRSSLTGGAGKLNLAAASAQGLRTSGVGTTVGSATGLATSGTISSLKFA
SASGLELVDPKLQAELSRKRKAEEDRWFKSGAFTQIGNKNNSGDGVFKKPDLPPSKRIDT
GATKSQN
NT seq 1824 nt   +upstreamnt  +downstreamnt
atgtcgaccctagccgacgagctgcttcaagattttgagggctccggctcagaagccggg
gaggatctcaatgaggacttcttcaacgaggctggtcttcccggcgcaacagcggccaat
ggcgaggacacagcaatggaggaagtgcgtgatgaggacgaggacgaagaccaggagatg
caagatggcgacgcgaacggcctcggggacgagagcggcgaggatgcaaaagcaaaaatc
gagaagatgcagctaggaggcatcaaggatgtccgtagcgtcgcgacattgatgaagacg
ctgacacctgtgctcgagaaaatcgcatacttccaatcacagccctcaaccgagaacgtg
ggcaacgtagaagaccatcccgagtaccatcttctgacccaatcgaacagcctgtccacc
cagatcgacaacgagatcatgctcgtgcacaagttcatccgcgaccactactccgttcgg
ttcccggagctggagacgctgatttcgaaccccgtcgagtatgcgaaggtggttgcgata
ctgggcaacgggcccttcgactcggagagcatcaaaaagatccagacctcgaccgataac
ccgctgggcgtgacgctcaagtccgttctcgacggcccgtctctgatgatcgtcacggtg
gaggctacgacatctaaaggccaagccatgccaccagagcagctgcagcgagtcgtcaag
gcatgcgagatggttatcgacctggacaaggccaagaagaccttgacagattatgtccag
tcgcgcatgaatatcttcgcaccgaacttgacagctctcatcggctcgctgacggctgct
cagctgctcaaccaagccggtggccttaccgccctctccaagactccggcgtgcaatttg
cccgcctggggctccaagaagcaggctaccgcagcgttggcaactaacgtcggcatccgg
catcaaggcttcatctaccagtcccccatcatccgcaccatccccagcgacctcaagaag
caagctatcaagatgtttgccaataagatcgtcatgtgcgcccgcagcgactgcttccat
caattccgcgacggctccgagggcgaacgcttgcgtgaagaatgcctggagcgcctcgac
aagctccagcaaaagcccctctcaaaatcggcccggccactgcccgcacccgatgacaag
cccagccgcaagcgcggcggtcgccgcgtgcgcaaagccaaagaagcctatgcaatgact
gagctgcgcaaggcgcagaatcgcatggcgttcggcaaggaagagaaagaggtgggctac
ggcacgggtgaccacactaccggtctcggtatgctgggtctcagcgacggccggctgcgc
gttgcgcagattgataaccgcacgcgcgccaagctcagccagaaacataaaggctgggga
ggcgtcagctcgatcagcgggaatgcatcgagcttgcggagcagtctaactggtggtgct
ggcaagctcaacttggctgcggctagcgctcaggggctgcggacgtcgggtgttggcacg
acggtgggcagtgcgacggggttggctacgtcgggtactatttcttcgctcaagttcgcg
tcggcgtcgggcctggagctggttgatccgaagctgcaggctgagctgagtaggaagagg
aaggccgaggaggatcgatggttcaagagcggtgcatttacgcagatcggaaataagaat
aatagcggcgatggggtatttaagaagcctgatctgccgccgagcaagaggattgatact
ggggcgacaaagtcgcagaattaa

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