KEGG   Thermochaetoides thermophila: CTHT_0010900
Entry
CTHT_0010900      CDS       T03100                                 
Name
(RefSeq) putative RNA binding protein
  KO
K14325  RNA-binding protein with serine-rich domain 1
Organism
cthr  Thermochaetoides thermophila
Pathway
cthr03013  Nucleocytoplasmic transport
cthr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cthr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    CTHT_0010900
   03015 mRNA surveillance pathway
    CTHT_0010900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cthr03019]
    CTHT_0010900
Messenger RNA biogenesis [BR:cthr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     CTHT_0010900
SSDB
Motif
Pfam: RRM_1 RRM_5 Nup35_RRM_2 RRM_3
Other DBs
NCBI-GeneID: 18255128
NCBI-ProteinID: XP_006691610
UniProt: G0S0Q8
LinkDB
Position
Unknown
AA seq 382 aa
MSSPGRATDRMALDDDRHSRSRSCSRTRSPRSRSRSRSRTPASQYSRRSRSPTSMDRRRD
SRARSPARNGGGGGRYRSRSRSHSRSISRGRTRSRSLSRSPSRSPRSRSRSRSYSRGRDR
SYSRGYSRSRSRSRSESPRQRSTKVGWLRYCSGGSRLTGLQIVVERLTKNITEDHLWEIF
GQYGEIEDLDLPISRVSGTNRGTAYILYYNEDDAQQAITHMHEAQLDGNIIHVSIVLPRR
KVSPPPPLARRGPRGPPANVRAVMPGGGGGRGGGRYASRSDVYRPRSLSRSRSRSPLPPP
SGGRRYRSRTRSRSRSRSASYDSRSRSRSRSRSPRRGGGRYGGGSRRNESYDRRRSVSRD
SYDRRSRSRSRTRSRSRSYERR
NT seq 1149 nt   +upstreamnt  +downstreamnt
atgtcgtctcctggaagggccaccgaccgaatggctctggacgacgaccgccattctcgt
tctaggtcttgctcccgcactcgctcgccgcgttctagatctcgctctcggtcgcgcacc
ccagcctcgcagtactcgcgtcgctcgcgatcgccaacatccatggacagacgcagagac
tcgcgcgctcgctctccagcgcgcaatggcggcggcggtggtcgctatcgctctcgttct
cgctcccacagtcgcagcattagccgtggccgtacccgctcacgcagcctgagtcgctcg
cctagtcggtctccacgcagccgcagtcgctccaggagttactcgcgcggtcgcgatcgc
agctacagccgcggctacagccggtcgagaagccgttctcggagtgagagccctcgccag
aggtcgactaaggtcggttggctacgatattgctctggaggaagtcggctgacaggattg
cagattgtggttgagcgcctgaccaagaacattactgaggaccatctctgggaaattttc
ggccagtatggtgagattgaggatctcgatctgcccatcagcagagtttctggaaccaac
cgtggcacagcctacatcctctactacaacgaggacgacgctcaacaagccataacccac
atgcatgaagcccagctcgacggcaacatcatccacgtctctattgtcctgcctcgccgc
aaggtttctcccccccctcctctcgcccgtcgtggccctcgtggtccccccgccaatgtt
cgtgccgttatgcctggcggtggcggcggtcgtggcggcggtcgttatgcttcccgctct
gacgtctatcgcccacgttccctgtctcgctctcgctctcgttcgcccctgcccccgcct
agcggtggccgtcggtaccgttcccgcactcggtcaaggtctcgctcgcgatctgcgtcc
tatgattcccgttctcgctctcgctctcgttctcgttctccccgccgcggtggtggcagg
tatggcggaggtagccgtcgcaatgaatcttatgatcgccgccgcagcgtcagtcgcgat
agttatgaccggcgcagtcgcagtcgtagcaggacgcgcagccggagcaggagctatgag
cgtagataa

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