Thermochaetoides thermophila: CTHT_0010900
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Entry
CTHT_0010900 CDS
T03100
Name
(RefSeq) putative RNA binding protein
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
cthr
Thermochaetoides thermophila
Pathway
cthr03013
Nucleocytoplasmic transport
cthr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CTHT_0010900
03015 mRNA surveillance pathway
CTHT_0010900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cthr03019
]
CTHT_0010900
Messenger RNA biogenesis [BR:
cthr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
CTHT_0010900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
18255128
NCBI-ProteinID:
XP_006691610
UniProt:
G0S0Q8
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MSSPGRATDRMALDDDRHSRSRSCSRTRSPRSRSRSRSRTPASQYSRRSRSPTSMDRRRD
SRARSPARNGGGGGRYRSRSRSHSRSISRGRTRSRSLSRSPSRSPRSRSRSRSYSRGRDR
SYSRGYSRSRSRSRSESPRQRSTKVGWLRYCSGGSRLTGLQIVVERLTKNITEDHLWEIF
GQYGEIEDLDLPISRVSGTNRGTAYILYYNEDDAQQAITHMHEAQLDGNIIHVSIVLPRR
KVSPPPPLARRGPRGPPANVRAVMPGGGGGRGGGRYASRSDVYRPRSLSRSRSRSPLPPP
SGGRRYRSRTRSRSRSRSASYDSRSRSRSRSRSPRRGGGRYGGGSRRNESYDRRRSVSRD
SYDRRSRSRSRTRSRSRSYERR
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctcctggaagggccaccgaccgaatggctctggacgacgaccgccattctcgt
tctaggtcttgctcccgcactcgctcgccgcgttctagatctcgctctcggtcgcgcacc
ccagcctcgcagtactcgcgtcgctcgcgatcgccaacatccatggacagacgcagagac
tcgcgcgctcgctctccagcgcgcaatggcggcggcggtggtcgctatcgctctcgttct
cgctcccacagtcgcagcattagccgtggccgtacccgctcacgcagcctgagtcgctcg
cctagtcggtctccacgcagccgcagtcgctccaggagttactcgcgcggtcgcgatcgc
agctacagccgcggctacagccggtcgagaagccgttctcggagtgagagccctcgccag
aggtcgactaaggtcggttggctacgatattgctctggaggaagtcggctgacaggattg
cagattgtggttgagcgcctgaccaagaacattactgaggaccatctctgggaaattttc
ggccagtatggtgagattgaggatctcgatctgcccatcagcagagtttctggaaccaac
cgtggcacagcctacatcctctactacaacgaggacgacgctcaacaagccataacccac
atgcatgaagcccagctcgacggcaacatcatccacgtctctattgtcctgcctcgccgc
aaggtttctcccccccctcctctcgcccgtcgtggccctcgtggtccccccgccaatgtt
cgtgccgttatgcctggcggtggcggcggtcgtggcggcggtcgttatgcttcccgctct
gacgtctatcgcccacgttccctgtctcgctctcgctctcgttcgcccctgcccccgcct
agcggtggccgtcggtaccgttcccgcactcggtcaaggtctcgctcgcgatctgcgtcc
tatgattcccgttctcgctctcgctctcgttctcgttctccccgccgcggtggtggcagg
tatggcggaggtagccgtcgcaatgaatcttatgatcgccgccgcagcgtcagtcgcgat
agttatgaccggcgcagtcgcagtcgtagcaggacgcgcagccggagcaggagctatgag
cgtagataa
DBGET
integrated database retrieval system