Thermochaetoides thermophila: CTHT_0010940
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Entry
CTHT_0010940 CDS
T03100
Name
(RefSeq) hypothetical protein
KO
K14308
nuclear pore complex protein Nup54
Organism
cthr
Thermochaetoides thermophila
Pathway
cthr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CTHT_0010940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cthr03019
]
CTHT_0010940
Messenger RNA biogenesis [BR:
cthr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CTHT_0010940
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_57_C
Adhesin_P1_N
V-SNARE_C
DivIVA
DUF7813
DUF6827
SHE3
Hemerythrin
Motif
Other DBs
NCBI-GeneID:
18255132
NCBI-ProteinID:
XP_006691614
UniProt:
G0S0R2
Structure
PDB
PDBj
LinkDB
All DBs
Position
Unknown
AA seq
326 aa
AA seq
DB search
MFSSLNTRPAGQSLFGANTGGGLFGQSLANQPQQQQQPLQQQQQQAAPALGQSQINQNQQ
LGGSLWQPGSLTAYQKPIPEQIKLIVDKWNPNHPNCAFKTYLYNKVDEHTVPLYGPGPNE
DPKEWEEALQRKPAPNFIPVLCSGFPSIVARLMLQRRVITEFNNKLHQINASLDAILSRH
DLDHTVRAFNARRRHAELSRRCLHLAARVQVLRNRGYALSGDEDELKQKLQQIDKTLNDP
AQGSRLEELWSRLIVLRGYAEDLKDQINQAGITESDGLGEEIEAKAKKILEDYDKQLQHL
KKQVEEAKKDFEEWEKQHNPAPAPAR
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgttttcgtcattaaacaccaggcctgcgggccaatctctgtttggggccaacacagga
ggtggtctgtttggtcaatcgctggcgaatcagccccagcaacagcagcaacctctccag
cagcaacagcaacaagctgcgcctgcgctgggccagtcgcaaataaaccaaaaccaacaa
cttggtggttcattatggcaaccaggtagcctcacagcctaccagaagccaattcccgag
cagataaagctgatcgtggacaaatggaacccgaaccatccgaattgcgccttcaagacc
tacctttacaacaaggtcgacgagcatactgtccctctctacgggcccggcccgaacgag
gaccccaaggaatgggaagaagctctccagcgcaagccagcgcccaacttcattcccgtt
ctttgctcgggcttcccctcgatcgtcgcgcgtttgatgctccagcgtcgggttatcacc
gagttcaacaataagctgcaccagatcaacgcaagcctagacgcgatcctatcgcggcac
gacctggaccacacggtgcgcgcgttcaacgcgcgccggcgccacgccgagctgagtcgc
cggtgcctgcatctggctgcgcgtgtgcaggttctgcgcaaccgcggatacgcccttagc
ggggacgaggatgaacttaagcagaagctgcagcagattgataagacgctgaatgatccc
gctcagggttcgaggctggaagagctgtggagcagattgatcgtgctccgggggtatgcg
gaagatctgaaggatcagattaatcaggcggggattacggagagtgacgggctgggtgag
gagattgaggctaaggcgaagaagattcttgaggattatgacaagcaactccagcatctc
aagaagcaggttgaggaggccaagaaggatttcgaggagtgggagaagcaacacaaccct
gcgccggcaccggcgcgctaa
DBGET
integrated database retrieval system
