KEGG   Thermochaetoides thermophila: CTHT_0011670
Entry
CTHT_0011670      CDS       T03100                                 
Name
(RefSeq) hypothetical protein
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
cthr  Thermochaetoides thermophila
Pathway
cthr03018  RNA degradation
cthr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cthr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CTHT_0011670
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CTHT_0011670
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cthr03019]
    CTHT_0011670
   03041 Spliceosome [BR:cthr03041]
    CTHT_0011670
Messenger RNA biogenesis [BR:cthr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     CTHT_0011670
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     CTHT_0011670
Spliceosome [BR:cthr03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    CTHT_0011670
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 18255205
NCBI-ProteinID: XP_006691686
UniProt: G0S0Y4
LinkDB
Position
Unknown
AA seq 148 aa
MADRGHRGGRGNFRGGRGGSGGGGGGYSSRGGSSAAGSAAGMPGASGNAQNQDKERPKKE
NILDLKKYMDKRITVKFNGGREATGVLKGYDALMNLVLDDVEELLRDDEGNEMTRPLGLV
VVRGTLLVFVSPVDGSEVIANPFVQAED
NT seq 447 nt   +upstreamnt  +downstreamnt
atggcagaccgaggccaccgcggcggccgcggcaactttaggggaggccgtggtggtagt
ggtggcggcggcggcggatatagcagccggggcggcagcagcgcggcaggctccgctgcc
ggaatgccgggcgccagcggtaatgcgcagaaccaggacaaggagcgccctaagaaggaa
aatatcctggatctgaagaagtacatggataagcggatcactgttaaattcaatggtggt
cgggaagctactggtgttttgaagggttatgatgcgttgatgaatttggtcttggacgac
gttgaagaattacttagagacgatgagggcaatgaaatgactcgccctcttggtttagtc
gttgttcgcggaactcttcttgtgtttgtcagcccagttgacgggagcgaggtgatagca
aatccgttcgtccaggctgaagattga

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