Thermochaetoides thermophila: CTHT_0012480 Help Entry CTHT_0012480      CDS       T03100                                  Name (RefSeq) 5'-3' RNA helicase-like protein   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism cthr  Thermochaetoides thermophila Brite KEGG Orthology (KO) [BR:cthr00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cthr03021]     CTHT_0012480 Enzymes [BR:cthr01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      CTHT_0012480     5.6.2.5  RNA 5'-3' helicase      CTHT_0012480 Transcription machinery [BR:cthr03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      CTHT_0012480 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SEN1_N AAA_11 AAA_12 SEN1_barrel AAA_30 AAA_19 UvrD-helicase Viral_helicase1 DUF1400 Motif Other DBs NCBI-GeneID:  18255286 NCBI-ProteinID:  XP_006691765 UniProt:  G0S163 Structure PDBPDBj LinkDB All DBs Position Unknown AA seq 1993 aa AA seqDB search MENNDLYQAAIGWYRAFEDCPPELHLCCPKVDDDDYATYDEPDVVDDSGVPVEEKKRRIS AYEERFQNVYNLSILLGLGKEVAGPWLDEWTRAVDSLLKKCDTCVRNWHRNRDPYLKALH LSPEQVTYLQSKLDEFDRQRITEGLQRAKAILEQYGPMSTVKLVDHDMSAVLALYEALCS LPYLARPEHQPLFDFVFENTQRKKPLRMQGGIIPSMTLFLFDESPVRRRFAETAWENRQP GSITAQEWDWAISGRLADQIVSLSFNRLQTLPPGQKILRFWSGFLFILHALSEKQIINSL RAMEVSPSIYFLALEHLGTNSDEALAMVLRALQELMEKSSKAFWQALEQVPPNQLVEEIF KSAAFRPLLNKSLRPELLVTEGDSQVPALAAWMRALVRSLPSTSWSDLCETSLRHLFETF RSDQAVDQSGRATCTLAGLVTLQQCLDGFLQQDSIDTGTGLIMVNQLLNRVVNYSEIIIR AASLKPGDIYNVGISKAAMAIIHSALALDAKATEVEWAALIAEKPVQDAVNRDSGALWET FLEMLWAGQLGHFELAKAMLMATLRLRSIEQFIPKRKEQLKRELDKFNKRYQQQTTAIGK MLNRLTDFEPEVLDKLCSDPRGQTIHPIVSSLIHGEDAIREAGFQLLKAITSESQPSDAV GRMLEVYFTPFLNAFSQAVDKLTATKDANSPWSHMIPILKCSDFVLTGLCDPSSGQLRRK VLTTEEHAAVKRWWECVWQAVDHSFRMMRIWHIKIDKKVMEDFCRDVMELGNKLLAQDGV MASSLAQESGEDAISKAMREVLDPPRKCSYSLADMLQLRDKYLVMGIIETIKKLLSRLQE NEMNLPQRTRGHLDSMLKKTKQRDGRMDYLTKTNLTDVQRIELLKALGEDAVIEEQFMGT KPGDREAKEKERALKQSKLDFSKAGISYSGDINEHLAQITPNFEKYHKSSLLETLKKEEP AKPKAPAKLSQQAILANQQQIKEARARERAEKARRDAEAIAKAKALRAGKTIPGEGSGLQ SIAGVRGKDHAPVVKDEIMVGSSSEDEGDDDDDDDVINRAKTKSKKIWDEAERRRLELEA EKLRGPVKKMKILRSAKDMRARLIPPMDVLHQAILEWDIFHEGNDPPNGYRCGNVSDTYP DPYSYKQTFFPLLINEAWRSFVTAKDETTSKPFGIKVLSRMTVDKFMEVTAAVPAQISKD RGLTEGDIVIISKGEDPLNQPQELHCLSRIWKTTYKKDTVEVVYRLNAKGNQILPALTPG SEFQVVKITNMTTIEREYAALESLQYYDLMDEILKAQPSPMLTFGDEAIKAVMDNYQLNP GQARAILNAKENDGFTLIQGPPGTGKTKTIVAMVGCLLTGVLKSSNTGAVQISRPGAGPT NGTAPSKKLLVCAPSNAAVDELVLRLKAGVKTMNGTFHKIEVLRLGRSDVINAAVKDVTL DELVKARMDAELSKNSSPSERDQLHKEAGEIKAKLAEIRPQLDAARLSDDRASAMKLQRE FDELKRRQAHIGAKIDADKASGNTYARETEIKRRQIQQEILDKAQVLCATLSGSGHEMFK NLNVEFETVIIDEAAQCVELSALIPLKYGCNKCILVGDPKQLPPTVLSQSAAKYGYDQSL FVRMQKNHPKDVHLLDMQYRMHPEISRFPSKEFYEGLLQDGADMARLRLQPWHQSVLLGP YRFFDVKGSQERGPKNQSLVNEEEVKVAMQLYMRFRSDYRDIDLTGKIGIITPYKAQLQR LRQKFVERYGESITEQIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLT RARSSLWILGDSRALVQGEFWAKLIEDAKQRDRYTNGNIMALLSQPGPRVSLESLAKQYS VPVAPVARSKEDVEMHDTPRTSESIPPAMPYRGSGIGGLNERGEATTPTTRGGELPIIQS TDGSAGKKRPRDANEENRPAFDPAKASSAFWFTQTTGIGIGIDRSFCDGSFGAGSSNPSA SSATATPSSSGTF NT seq 5982 nt NT seq  +upstreamnt  +downstreamnt atggaaaacaacgacttgtaccaggcggccattgggtggtatcgggcctttgaggactgc ccacctgaactccacctgtgttgccccaaagtcgacgacgacgattatgcgacgtatgac gagccagatgttgtcgacgacagcggcgtcccggttgaagagaagaagcgccgaatctcc gcgtatgaagagcgcttccaaaatgtttacaatctcagcatcctgcttggcctcgggaaa gaagtagcaggtccatggctcgatgagtggacccgagccgtggattcattgctcaagaaa tgcgacacctgtgtgcgcaattggcatcgaaaccgtgatccttatctgaaggcattgcac ctatctccggaacaagtaacctatttgcagtctaagctcgatgagttcgacagacaacgt ataactgagggccttcagcgggccaaggccatcctcgagcaatatgggccgatgtcaacc gtgaaactggtcgaccacgatatgtcagctgtccttgcactttatgaggctctttgcagc ttgccatatcttgctcgccccgaacaccaaccgctcttcgacttcgtctttgagaatacc cagcgcaagaagcctctgaggatgcaaggcggtatcataccttccatgactttgtttttg ttcgatgaatctcccgttaggcggaggtttgcggaaactgcttgggagaatcggcagcct ggatctattaccgctcaggagtgggattgggcaatttctggtcgcttggctgatcagatc gtgtcactctcgttcaacaggcttcaaacacttcctccaggccagaagatccttcgattt tggagtggcttcctcttcattctacatgccttgagcgagaaacaaatcataaactcgctc cgagctatggaggtgtctccaagcatttatttccttgccctggagcatctgggtaccaat tccgacgaagcgttggcaatggtgctcagagcactccaagagctcatggagaagtcttct aaggccttttggcaggctcttgaacaggtccccccaaaccaactagttgaagagatcttc aagagtgcggcgtttcggcctttacttaacaagtccttaaggccagagctgttggtcacg gaaggtgacagtcaggtcccagctcttgctgcttggatgagggccctggttcgatcctta ccgtctacgagttggtccgacctctgtgaaacctccttgcggcatcttttcgagaccttt cggtcagaccaggctgtagaccagtctggtcgggctacttgcactcttgccggtctcgtc accctccagcagtgtttggatggctttttgcaacaagactcgatcgacaccggaaccggg ctgatcatggttaatcaactcctcaatagggttgttaactatagcgagatcattatccgc gccgcgagtctgaagcctggtgatatctacaatgttggtatctccaaggctgctatggcc atcatacactctgcccttgcgctagacgcgaaagcgacagaggttgagtgggctgctctg attgcagagaagccagttcaagatgctgtgaaccgggattcgggcgcgctttgggaaaca ttcttggagatgctctgggctggccagctgggacattttgaacttgcaaaagcaatgctg atggctacattgcgtctcaggagcatcgagcagttcatccccaagcggaaagaacaactc aaaagggagctggataagtttaataagagataccaacagcaaacaacagccattggaaag atgctcaaccgcttgaccgatttcgagccagaggtcttggacaaattgtgttcggatcct cggggtcaaaccatccatcccatcgtctcgtcgctaattcatggcgaagatgcaatccgt gaagctggatttcagctgctcaaagccatcacatccgaaagtcagccctcagacgcggta ggcaggatgctggaggtttacttcacccctttcttaaatgcattttcccaagctgtcgac aagctcactgccacgaaggatgcaaatagcccttggagtcacatgatcccgatcttgaag tgcagcgacttcgtccttactggtttatgtgacccttcatcaggacagctccgacgtaag gttctcacaaccgaggagcatgctgccgttaaacgttggtgggagtgcgtctggcaagcc gtcgatcattcgtttcggatgatgagaatctggcacatcaagatcgataagaaggtcatg gaggacttttgccgcgatgtgatggagttgggcaacaagctgcttgctcaggatggcgtg atggcttcctctctcgctcaagagagcggcgaggacgcgatatccaaggccatgagagaa gtcctggaccctcccaggaagtgttcgtactccctcgcggacatgctgcagcttcgagac aagtatctcgtcatgggcatcatcgagactatcaaaaagctcctctcgagattgcaagag aatgagatgaacttgcctcagagaactcgtggacatctggatagcatgcttaagaaaacg aagcagagggatggccgcatggactacctgacaaagacgaacttgacagatgttcagcgt attgagctgcttaaggccctaggagaggatgctgtcatcgaagagcagtttatgggcacg aagcctggcgacagggaagctaaagagaaggaacgggctctgaagcagagcaagcttgat ttttccaaggctggtatcagctattctggggatatcaacgaacacctcgcccaaatcact cctaactttgagaagtaccataagtcttcacttctcgagactttaaagaaggaagaacct gccaagcctaaggcgccggcaaagctcagtcagcaggccattcttgccaatcaacagcaa atcaaggaggctcgcgctcgggaaagggccgagaaggcgaggcgggatgcagaagctatc gccaaggcaaaggctctccgggctggcaagacgattccaggagagggctcaggcttgcaa tccattgccggagttcgcggaaaagatcacgcacccgtggtcaaagatgaaatcatggtc ggctcctcgtccgaagatgaaggcgatgatgacgatgacgacgatgtcatcaacagggcc aagacaaagagcaagaagatttgggacgaggcagagcgtcgccggcttgagttggaagcc gagaagctccgcgggcccgttaagaagatgaaaatcctgagatcggccaaggacatgcga gcacggttgattcctccaatggatgtcttgcaccaagccatattagagtgggacatcttt catgaagggaacgaccctcctaatgggtatcgttgtggtaatgtgtcggacacgtaccca gatccatacagttacaagcagactttttttcctctacttatcaacgaggcttggcgttcg tttgtgacagccaaagacgagaccacgtcgaaaccctttggtatcaaggttctgagtcgt atgactgtggacaaattcatggaagtgacggctgctgtccccgctcagattagcaaagat cggggtcttactgagggagacatcgttatcatctccaagggagaggacccgctgaaccag ccgcaagagctgcactgtctttctcggatctggaagactacctacaagaaagacaccgtc gaggtcgtctatcgcctcaacgctaagggtaaccagatcctgcctgcccttactcccggc tctgagttccaagttgtcaagatcaccaacatgacaacaattgagcgcgagtacgctgcg ctggagagtcttcagtattatgatctcatggatgaaattctgaaggcgcagccgtcgcca atgttgacctttggtgacgaggctatcaaggcggtcatggacaattaccagctcaatcct ggtcaggcgcgagcgatcctgaacgcgaaggagaatgatgggtttacgttgatccaggga cctcccggtactggaaagaccaagaccattgttgcgatggttggctgcttgctcaccggc gttttgaaatcatcgaatactggtgctgtgcagatcagccgacctggtgcagggcctacc aacggcaccgcaccgtccaagaagcttctcgtgtgtgctcccagcaacgccgctgtagac gaattggtactgcgtttgaaggcaggtgtcaagacaatgaatgggacatttcacaagatt gaggtcctccgtttgggccgcagcgatgtcatcaatgcagccgtcaaggatgttactctc gacgagctggttaaggccaggatggatgcggagctcagcaagaacagcagtcccagcgag cgggatcagctacacaaggaagcaggagagatcaaagccaaacttgctgagatccgtcca cagttggatgcagctagactgagcgatgaccgagcatctgcgatgaaactgcagcgcgag tttgacgagctcaagcgccgtcaagctcacatcggcgccaagatcgacgctgacaaagcc agcggcaacacttatgcccgtgagactgagatcaagcgccggcagattcagcaagagatc ttagataaggctcaagttctttgtgctaccttgagcgggagcggtcacgaaatgttcaag aatctcaacgtcgagttcgagactgtcatcatcgacgaggctgctcagtgtgtggaactt agcgccctcatcccactgaagtatggctgcaacaagtgtatccttgtcggtgacccgaag cagctccctccgacagtcctctcacaatctgcggccaagtatggctacgaccagagtttg ttcgtccggatgcaaaagaatcatcccaaggatgtccatttgctggatatgcagtaccgc atgcatccggaaatcagcaggttccccagcaaggagttctacgaaggactgctgcaagat ggcgctgatatggcaaggctccgtttgcagccgtggcatcagagcgtcctgctgggccct taccgcttctttgatgtgaagggttcgcaagagcgtggccccaagaaccagtctctggtc aacgaagaagaggtcaaggttgctatgcagctctatatgcgcttccgctcagattatcgg gatatcgacttgacaggcaagattggcatcatcaccccgtacaaggcccagctgcaacgt ctccggcagaagtttgttgagagatatggcgagagcattacagagcaaattgagttcaac accacggacgcgttccagggtcgcgagtgtgagattatcatcttctcttgtgtccgagcc agtccaacgggtggtatcggtttcatgacagatatccgtcgtatgaatgtcggtttgacg cgtgcgaggtcatcactgtggattttgggtgattcccgcgcactcgttcagggtgaattt tgggccaagctcatcgaggatgctaaacagcgcgatcgctacaccaacggcaacatcatg gccctgctgagccagcctgggcccagggtgtcacttgaatcgcttgccaagcaatattcc gtgccagttgctcctgtcgctcggtccaaggaggatgtggagatgcatgatactccgcgc acctctgagtcgatccccccagcgatgccttaccgtggttctggcatcggcgggctaaat gaacggggcgaagctactaccccaactacccggggcggagagcttcccatcattcaatcc actgatggatctgctgggaagaagcgaccgcgggatgccaatgaagaaaatcggcccgca ttcgaccccgccaaagcctcctcagccttctggttcacacaaacaaccggcatcggcatc ggcatcgatcgatccttctgcgatggaagttttggggctggttcctccaacccgtccgcc tcctcggccacagccacgccctcctcctccggcaccttctag

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