Thermochaetoides thermophila: CTHT_0013190
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Entry
CTHT_0013190 CDS
T03100
Name
(RefSeq) hypothetical protein
KO
K12849
pre-mRNA-splicing factor 38A
Organism
cthr
Thermochaetoides thermophila
Pathway
cthr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CTHT_0013190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cthr03041
]
CTHT_0013190
Spliceosome [BR:
cthr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
CTHT_0013190
Complex C
U4/U6.U5 tri-SnRNP related factors
CTHT_0013190
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
18255357
NCBI-ProteinID:
XP_006691835
UniProt:
G0S1D3
Structure
PDB
PDBj
LinkDB
All DBs
Position
Unknown
AA seq
257 aa
AA seq
DB search
MSKPDTHRADERRFLDERGSSGPLAPNGLNPATIMEKAVRERIVESYFWKEQCFGVNEAD
IVDRVVEHVRFVGGVTGVTQKPSPFLCLAFKLLQLAPGDDILKEYLYFGGEKFKYLRALA
AFYIRLTRPDKEVYTLLEPFLEDRRKLRRKGKNGTSLTYMDEFIDDLLTKDRVCSTSLWK
MRRRDILEDLDLLEPRVSPLGSLEDILEEEEQAAKNEDGERRETGQESLSNLATRHKPPR
QVAERSAMPSSRPDTMS
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaacccgacacccaccgcgccgacgagcggcgcttcctcgacgagcgcggctcg
tccggcccgctcgcccccaacggcctcaaccccgccacaattatggaaaaggcggtccgc
gagcgaatagtcgagtcttacttctggaaagagcaatgttttggcgtcaacgaggcagac
atcgtcgaccgggtcgtcgagcatgtccgctttgttgggggcgtgacgggtgtcacgcag
aaacccagtccatttttgtgcctagcgtttaagttattacaactcgcgcctggggatgat
attctaaaagagtatttgtacttcggcggggagaagttcaagtacctccgcgcgctggca
gcgttttacatccggctaacgagaccagataaggaggtgtacacgttgctggagccgttt
ttggaggatcggaggaagttgcggagaaaagggaagaatgggacgagcttgacgtatatg
gatgagttcattgatgatctgttgacgaaggatcgagtttgttcgacgagtttgtggaag
atgaggaggagggatatactggaggatctggaccttttagagccgagggttagtccgttg
gggagtttggaggatattctcgaggaggaggaacaagcagcgaagaatgaggatggggag
aggcgtgaaaccggacaggagtccttgagcaatttggctactcggcataagccaccacga
caagtggccgagcgcagcgccatgccaagtagcaggccagacaccatgtcttaa
DBGET
integrated database retrieval system
