Thermochaetoides thermophila: CTHT_0013680
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Entry
CTHT_0013680 CDS
T03100
Name
(RefSeq) RNA polymerase II elongator-like protein
KO
K11373
elongator complex protein 1
Organism
cthr
Thermochaetoides thermophila
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cthr03016
]
CTHT_0013680
Transfer RNA biogenesis [BR:
cthr03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
CTHT_0013680
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
Beta-prop_ELP1_2nd
A-sol_ELP1
TPR_ELP1
HB_ELP1
Beta-prop_WDR19_1st
TPR_GEMI5
Clathrin
WD40_CDC20-Fz
TPR_1
Motif
Other DBs
NCBI-GeneID:
18255406
NCBI-ProteinID:
XP_006691883
UniProt:
G0S1I1
LinkDB
All DBs
Position
Unknown
AA seq
1329 aa
AA seq
DB search
MRNLRNISHGVFRAYTTPSPLSSFSALCWDVSRDELIVACGPTAEDQRIELLRIGRNVRG
TSPALLHSRPIASWDYPTQSPNGEPDSICDMHFFPDTLTTVLILSSGDIISVVEDDDSAT
GLAFSSPPHAEGTAHVEIVGTLTPSISAARWSPDEELLVLVTGDGKVVFMSRNFDVITET
VCTEEDLKLSKHVSVGWGKKETQFQGRGAKARQLRDPTIPEKVDEGKRSEKDDGRCSISW
RGDGAYVAVNFLMEGVRRVVRVYTREGELDSVSEPVDGLEGSLSWRPEGNLIAGIQRLPG
QVDVVFFERNGLRHGQFTLRAPQDGLGAMDNIALEWNADSTVLAVILRDRVQLWTMGNYH
YYLKQEVLCGDPRSGNLRPLFAWHAEKALLWAASTPGKVLINEYAFAIARGPTSAPHDQG
AVAVIDGRTIKFTPFRTANVPPPMAFCEVEVETPAIDVAFSTDCSKMAVLHRGGVSLFAF
EANGPRLPAPKLVCTVMFEKSTEQQYEEPLLQIGFSRPTEVAVLQMADDLELLSHDFSAV
EGKPWRKTDASSIGTITTPSSGEIDGVVAQHVSGRLSCIAGGEHSFVSVEFPTFLPWANY
IVLNGEVVAFGLSRNGHLYANTRQLAKNCTSFAVTEDHLIFTTSNHYVKFVHLTAVDALD
VPPDDPEKDERCRSIERGGRLVTAIPTRMSLVLQMPRGNLETIYPRAMVLAGIRQRIEQK
NYASAFATCRTQRVDMNILFDHRPEQFFENVGLFLEQVKDPANIDLFLSSLKDEDVTQTI
YRDTKSGTPQTDVKTAQRPGKINTICDAVLKALKTQKKSNLQNIITAHVCKHPPALDDGL
LVVAELMREDEELAERAVEHICFLADVNRLYDHALGLYNLELTLLVAQQSQMDPREYLPF
IQNLHKMPELKRKFTIDDKLERYERALDHLKALNNFEDVKKYVVKHKLYHHALTIYRHDE
PHHRAITGLFAAYLKSQSQFKEAGLAYESLGNFVDATECYLKAGVSCWRECLFAAQQQDP
PISQEKLAEIATSLADALREAKDYSAAATIHLDYLTSLDTAIPLLCKGYHFADALRLITL
HNRRDLLASAIDPGLADAFSSSTEFLADCRSQLRAQVPRILELRRKAKEDPLSFYEGDLS
KAGADIPDDISVAASRVSTSASLFTRYTGKGAPGTVAGSQASSRATSRNRRREEKKRARG
RKGTIYEEEYLVNSVRRLVERVEQSKPEIERLVWALVRRGMQEQARAMEEGLAQLLAGCE
KAVGEVWPVKEGQGQTQEQRDGEQEMMGWRPGGAEGVLYDSMEALRKDQRPPSVGGVKRL
VLLGKEGKV
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaacctgcgcaacatcagccatggcgtgtttcgagcctatactacaccctcaccg
ttgtcatctttttcagcattgtgttgggatgtctcgcgtgacgagctgatcgttgcatgc
gggccgacagcagaggatcagaggattgagttgttacggatcgggaggaatgtaagaggg
acttcgccggcgttgttgcattcccgccccatcgcctcttgggactaccccacccaaagc
cctaatggagaaccagactctatctgtgacatgcacttcttccccgacacgcttaccaca
gtcctgatcctctcctcaggtgacatcatctccgttgttgaagatgatgacagcgcgact
ggccttgccttctcctcccctccccacgctgaaggcacagcccatgtcgaaatagtcggc
acccttaccccctccatctctgcggcgcgctggtccccagatgaggaactcctcgtcttg
gtgacaggggatggcaaggttgtgtttatgtctcgcaattttgacgttatcacggagact
gtatgcacggaagaggatctgaagctgtcgaagcatgtgtctgttgggtgggggaagaag
gagacgcagtttcagggacggggtgccaaggcaagacagctcagggacccgacgatcccg
gagaaggttgatgaggggaagaggagtgagaaagatgatgggaggtgcagtattagttgg
aggggggatggtgcatatgtggcggtgaatttcctcatggagggagtaaggagagtggtg
agggtgtatacccgggagggcgagctggatagtgtgagtgagcctgtggatggactcgag
gggagtctgagttggcggccggaggggaatctcatcgcgggaattcagcgcctacccggc
caggttgacgttgtgttttttgagaggaatgggctccggcatgggcagtttacgctgcgc
gcgccccaagacgggctgggtgcgatggataatattgcgttggagtggaatgctgactca
acggtgttggcagtgattttaagggatcgggtacagttgtggacgatggggaattatcat
tattatttgaaacaggaggttttatgtggggatccgaggtcgggaaatctgagaccgttg
tttgcctggcatgcggagaaggctttgctgtgggcagcttcgactcctggcaaggtcctg
atcaacgaatacgccttcgccattgctcgcggcccaaccagcgcccctcatgaccaaggt
gcggtggctgtcattgacggccgcactatcaagttcacgcccttccgtactgccaacgtc
cctcccccgatggccttctgcgaggttgaggtcgagacgcctgctatcgatgtggctttc
tccacagactgctccaagatggctgtcttgcatcggggaggtgtcagtctcttcgccttc
gaggctaatgggcctcggctgccggccccgaagttagtgtgtaccgtgatgtttgagaag
tccactgagcagcaatacgaggaacctctgctgcagatcggcttctcccgaccaacagag
gtcgcggtactccaaatggcagatgacctcgagcttctaagccatgatttctccgccgtc
gaaggcaaaccctggcgcaaaacggacgcgagctccatcggcaccatcacaacccccagc
tcgggcgagatcgacggtgttgtagcccagcacgtgtccggccgactaagctgcattgct
ggtggggagcactccttcgtctcagtcgagttccccacattcttaccctgggcgaactac
atcgtcttaaacggggaggtcgtcgcgtttgggctgtccaggaatgggcatctgtatgcc
aatactcggcagctggcgaagaactgcacctcgtttgcggtgacggaagaccatttgata
tttacgacaagcaatcactacgtgaagtttgtgcatttgactgctgtggatgctctcgat
gtcccgccggatgaccccgagaaggatgagcgctgccggagtattgagcgcggaggcagg
ttggttactgctattccgaccaggatgagtctggtcctgcagatgcctcgtggtaatctc
gagactatttaccctcgcgcaatggtccttgctggcatcaggcagcggatcgagcagaaa
aactacgcttcggcctttgcgacttgccggacccagcgcgtggatatgaacattctgttt
gatcacaggcccgagcagttcttcgagaatgtgggtttgttcttggagcaggttaaggac
ccggcaaatattgatttgtttttgtcatcgctgaaggatgaggatgtcacgcagactatc
tacagggacaccaagtctgggacgccacagaccgacgttaagactgcccagaggcctggg
aagatcaataccatctgcgatgctgtcctaaaggctctgaaaacgcagaagaagtccaac
ctgcagaacatcatcacagctcacgtgtgcaagcaccctcctgctctcgacgacggactg
ctagtcgtcgccgagctcatgagggaggacgaagaacttgccgagcgtgcagtcgagcac
atctgcttcctggccgacgtcaaccggctctacgaccacgccctgggtctctacaacctg
gaacttaccctcttagttgcccaacaatcccagatggatccacgcgagtacctccccttc
atccagaacctccacaagatgcccgagctcaagcgcaagttcacaatcgacgacaagctc
gagcgctatgagcgcgccctcgaccatcttaaggccctcaacaacttcgaggacgtcaaa
aagtacgtcgtcaagcacaagctctaccaccacgccctaaccatctatcgccacgatgag
ccccaccaccgcgccatcaccggcctcttcgccgcctacctcaagtcccaatcgcaattt
aaggaagccggcctggcatacgaatccctaggcaactttgtcgacgcaacagaatgctac
ctaaaagccggagtctcttgctggcgggaatgtctcttcgccgcgcagcaacaagacccc
cctattagccaggaaaaactcgccgaaatagccacctccctcgcagatgccctccgtgaa
gcaaaagactattctgccgcagccaccatccacctagactaccttacttccctcgacacc
gcgatccctctgctctgcaaaggctaccacttcgccgacgccctccgtctcatcacactg
cacaaccgtcgggatctgctcgcatctgccatcgatcccggcctggcagacgctttctcc
tctagcaccgagttcttggctgattgccgttctcagttacgcgcccaagttccacgcatt
ctagagttgcgccgcaaggcaaaggaagaccccctctctttctacgaaggtgacctttcc
aaagcgggcgccgacataccagacgacatctccgtcgccgcatcgcgagtcagcaccagc
gcgagcctcttcacgcgttacaccggcaagggcgccccggggaccgttgcaggctcgcag
gcatcctcccgcgcaacaagccggaatcgtcgtagagaagagaaaaagcgtgctcgaggc
agaaaagggactatctatgaagaagaatacctcgtcaacagcgtacgcagactcgttgag
cgcgtggagcagagcaagcccgaaatagagaggcttgtgtgggcgcttgtgaggaggggg
atgcaggagcaggcgagggcgatggaggaagggttggcgcagttgttggcggggtgtgag
aaggctgttggggaggtctggcctgtcaaagaggggcagggacagacacaggagcagagg
gatggagagcaggagatgatggggtggaggcccgggggagcggaaggggtgttgtatgat
agtatggaggcgttgaggaaagatcagaggccgccttctgtggggggggttaagaggctg
gtgttgttggggaaggagggcaaggtgtga
DBGET
integrated database retrieval system
