Thermochaetoides thermophila: CTHT_0013800
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Entry
CTHT_0013800 CDS
T03100
Name
(RefSeq) replication factor C subunit-like protein
KO
K10754
replication factor C subunit 1
Organism
cthr
Thermochaetoides thermophila
Pathway
cthr03030
DNA replication
cthr03410
Base excision repair
cthr03420
Nucleotide excision repair
cthr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CTHT_0013800
03410 Base excision repair
CTHT_0013800
03420 Nucleotide excision repair
CTHT_0013800
03430 Mismatch repair
CTHT_0013800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cthr03032
]
CTHT_0013800
03400 DNA repair and recombination proteins [BR:
cthr03400
]
CTHT_0013800
DNA replication proteins [BR:
cthr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
CTHT_0013800
DNA repair and recombination proteins [BR:
cthr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
CTHT_0013800
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
nSTAND3
AAA_22
AAA_16
BRCT_2
AAA_14
RCF1-5-like_lid
AAA_18
AAA_30
AAA_33
RuvB_N
AAA_28
NTPase_1
Motif
Other DBs
NCBI-GeneID:
18255418
NCBI-ProteinID:
XP_006691895
UniProt:
G0S1J3
LinkDB
All DBs
Position
Unknown
AA seq
1041 aa
AA seq
DB search
MPDIRSFFAPKGSAPPKPAKPAAKKEEEKKARAKGRKVIEDSDDDIEDPPVDIKGVETTA
AKYFSSSKAKSEPTSAQGTPKKSKAPPAAGSEVRLSPRTKTTKVSPEPKPTKNGTKKPVT
AYKKHEQYDDDAFLDDDDDAGDDIFAAAVKKRKNDDYVEDDSDDEVLPKPKRVASKATKA
IKTELDEDVKQTPNKAAQTVPAPSRKRKSPTSDSEFDDDEDVKPAKKAAPAKPRAPRAKK
EDEPEADDIKAILDNVPLVQAPDAPPKDESQKFDWRKKFAGGGNAGPPPNPGAIEIPEGA
ENCLLGKTFVFTGMLKTISREDAQALVKRYGGKVTTAPSSKTDFVVLGDDAGPSKLRKIK
EHNLKTINEEGLFYLIKTLPAHGGTGKGAEKAKQKQEKEEQKAREEALRMEQEEKARQEE
AEKEAQKAAAARGVAPPPAAPAPVLSQLWTTKYAPTQLNQICGNKQNVEKIQSWLRNWPK
ARKWNFQKRGADGMGGYRAIIISGPPGIGKTTAAHLAAKLEGYDVIESNASDTRNKKLVE
EGVTDILNNTSLLGYFAGDGKKVDATKKRIVLIMDEVDGMSAGDRGGVGALAKLCRKTEV
PMILICNDRRLPKMKPFDHVAFDIKFQRPTVDQIRSRMMTICHREGLKMSPPVLNALIEG
SGKDIRQIINMLATAKLDQTTMDFDQTKAMTKAWEKHVILKPWDICQKLIAGGMFSPASN
ATLNDKIELYFNDHEFSFLMIQENYLRSRPAALNGRNFANPREENLKYLELVDLAAESIS
DGDLVDCMIHGPQQHWSLMPTHAVFSTVRPASFIAGSLGGQTTFTTWLGNNSKYGKLSRF
VREIHSHMRLRSSGDHNEIRQEYMPVLWQRLVKRLEVEGREAVDEVIELMDSYYLTRDDF
DSIKELAVGPCAEEYVNIETQTKATFTRVYNANPHPIPFMKASSVTAPKKLSRDIPDLEE
AIEEEDENDVLEPAEAEAADEEEELDLNKDKYIKMPKAKKPAGKKASKAAKAATDDEDDG
EDDAPKKGKGKGKGSGRSKKA
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacatccggtccttcttcgcccccaaggggtctgctcctcccaagcctgccaaa
ccagccgcaaagaaggaagaggaaaagaaggcgagagccaaaggacggaaggtgattgag
gacagcgatgatgacatagaggacccccctgtggatatcaagggcgttgagaccactgct
gccaagtacttctcgtcgtccaaggcaaagtccgaacccacatcagcccaagggacgcca
aagaaatccaaagctcccccggccgctggaagtgaagtgcgcttgagccccagaaccaag
accacaaaagtttctcccgaaccaaaacctacaaaaaatggcaccaaaaaaccggtgacc
gcatataagaaacacgagcagtacgatgatgacgcattcctggacgacgacgatgacgct
ggcgacgacatctttgccgcagccgtcaagaagaggaagaacgacgactacgtcgaagac
gacagcgacgatgaggtgcttcctaagcccaagcgcgtggcttctaaggccaccaaggcg
atcaagaccgagctggacgaggatgtaaagcagaccccgaacaaggcggctcagacggtc
cctgctcccagtcggaaacgcaagtcgccgacctcagacagcgagtttgacgacgatgaa
gatgtcaagccggcaaagaaggctgctcctgcgaagccccgcgcgccgcgggccaagaaa
gaggacgaacccgaggccgatgacatcaaagccattctggacaacgtgcccttggtccag
gcaccggatgccccgcccaaggatgagagccagaagttcgactggaggaagaagtttgct
ggcggcggcaacgccggccctcctcccaaccccggcgctattgagatccccgagggagcg
gaaaactgcctgctgggcaagacgttcgtgttcaccggcatgctcaagaccatcagccgc
gaggatgctcaggctctcgtcaagcgatatggtggcaaggtgaccacggcgcccagcagc
aagaccgatttcgtcgtcctcggcgacgatgccggaccgagcaagcttcgcaagatcaag
gagcacaacctcaagactatcaatgaagaaggcttattctatctgatcaagaccttaccc
gcacatggcggcaccggcaagggagccgagaaggccaagcagaagcaggaaaaggaggag
cagaaggctcgcgaggaagctctgcggatggagcaggaagagaaggcccggcaggaagag
gccgagaaggaggctcaaaaggctgccgccgcccgtggcgttgctcctcctcctgctgcc
ccggcgccggtcctgtcccagctctggacgactaagtatgcgcccacgcagctgaaccag
atctgcggcaataagcagaacgtggagaagatccagagctggctgcgaaactggcccaag
gcgcgcaagtggaatttccagaagcgcggtgccgacggtatgggcggctaccgtgccatt
atcatctcgggtcctcctggtatcggcaagacgacagccgcccatctggcggctaagctg
gaaggttatgatgtcattgagagcaatgccagtgacacccggaacaagaagctcgttgag
gagggtgtcaccgacattctcaacaatacttcgctgcttggttattttgccggcgacggc
aagaaggtcgatgcaaccaagaagagaatcgtgctgatcatggacgaagtcgacggcatg
tcagccggtgaccgcggcggtgtcggcgcgctggccaagctctgtcgcaagacagaagtt
cccatgatcctgatatgcaatgaccggcggctgcccaagatgaaaccgttcgaccacgtc
gcattcgacatcaagttccagcggccgacggtcgaccaaatccggtcgcgcatgatgacc
atctgccatcgcgaaggcctcaagatgtcaccgcctgtgctgaacgcccttatcgagggc
agcggcaaggacatccggcagatcatcaacatgctcgccacggccaagctggaccaaacc
accatggacttcgaccaaaccaaagccatgaccaaagcctgggagaagcacgtcatcctc
aagccctgggacatctgccaaaagctcatcgcaggcggcatgttcagccccgcaagcaac
gccacgctcaacgacaagatcgagctctacttcaacgaccacgagttcagcttcctcatg
atccaagagaactatctccgctcccgccccgccgccctaaacggccgcaactttgccaac
ccccgcgaagaaaacctcaagtacctcgaactagtcgacctcgccgccgaatccatcagc
gacggcgacctcgtcgactgcatgatccacggcccgcagcagcactggagcttgatgccc
acgcacgccgtgttcagtaccgtgcggcctgcaagctttatcgcgggttcgttgggcggt
cagacgacgtttaccacgtggctgggcaacaacagcaagtatggcaagctgtcgcggttt
gtgcgagagatacactcgcatatgcggctgcggagttcgggtgatcataatgagattagg
caggagtacatgccggtgctgtggcagcggttggtgaaaaggttggaggttgagggacgg
gaggccgtggacgaggtcattgagctgatggatagctattacctgacgagggacgatttt
gactccattaaggagttggcggttgggccgtgtgccgaggagtacgttaacattgagacg
cagaccaaggcgacgtttacgagagtgtacaacgccaacccccaccctatccccttcatg
aaagcgtccagcgtcaccgcgcccaagaaactcagccgtgacatccccgacctggaggag
gccatcgaagaagaggacgagaatgatgtccttgagccggctgaggccgaggctgctgac
gaagaggaggagctcgacctcaataaggataagtacattaaaatgccgaaggcgaagaag
cctgctgggaagaaagcatcgaaggctgctaaggccgctactgatgatgaggatgatggg
gaggatgatgcgcctaagaaggggaaagggaaggggaaggggagcggacggtcgaagaag
gcttga
DBGET
integrated database retrieval system
