Thermochaetoides thermophila: CTHT_0013970
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Entry
CTHT_0013970 CDS
T03100
Name
(RefSeq) hypothetical protein
KO
K15163
mediator of RNA polymerase II transcription subunit 12, fungi type
Organism
cthr
Thermochaetoides thermophila
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cthr03021
]
CTHT_0013970
Transcription machinery [BR:
cthr03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
CTHT_0013970
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_SRB8
Med12
TFIIA
DDHD
RR_TM4-6
Tra1_central
CCDC47
Radial_spoke
eIF-3_zeta
DUF2828
Motif
Other DBs
NCBI-GeneID:
18255435
NCBI-ProteinID:
XP_006691911
UniProt:
G0S1K9
LinkDB
All DBs
Position
Unknown
AA seq
1875 aa
AA seq
DB search
MTSRPPLGVQQPRPPQHQHTHKLPTSSLSQRSAPHQHQHQHQHYLQHQQQRVLAQQPPPQ
QPLPHQALQQHAYPLQQHAHFPPQSQSPVRRDVNGYDLTTTPDFGDGAAAMPSRQTLHRR
PGSRLKLEIYNSDPADPTAASTILHDTSLTESPSCVADSKPFTPSRIMPPMDPSEMGDMS
PDPSTHMHTADLDAPLPMPARPARINTVLPQRPAAQPPAASNTTSKKDSRPKPFTVEPPA
AAPSYPVRGNDQQKTTVAYADFFPWTGNGPEDQFSEHVIRNGYYDKGIFSTAETQSAKAT
LFPALKHKTGLTALSSVFAAVLGQRRHNGQITTPSTFKPPPRVTLTDTKRELWLKDLANP
AISLRRLSRTIPHGIRGKVLLEQCLNKNVPTDRAVWLIKCVGANEIRATKRKGVGTLVVG
GESRWIKDWTISVEQFIEQVYFGFDEDDWKAKVHYTTRLAAHLYAEHLLDREHYSEWLVS
SLENSSEARLPMWMLLTQLYWSDLLKLRKYGRRLVTALISHHHLIYNHPDRDILNPLLKT
LTDCLNTLILSSPENFVCPAAWIKYRDALQACLPAGDEARRNSFEAINLRNEQLAASANR
SQPAARHILVGMLDGTLHAPMPSDLPSQCWSVSQDKPALARALLEWCTSLYRPGLAKVYV
TSKILQHWSTLGFDVTLAVLDFLCDDPLEEQPRKNALYHLVCELVRASLFAVSRYIRWLM
GRGGVRRPEQVAPDGPAATRLLAEMPPCVLTSSERNLRSGILRRASYSVADEAENTVVAI
KHLRYTFGMPMPDVQPNDPIFQRPPMAMAKLTKRISKASRTLKGEVGSWLRASLASSSSS
SSSSSSSFSSSTGDKEKGGPQLPDVSPSVFYGMRSVLEAAEDFTILADVLKTLTKHCTVD
ILPAIADTVNRHFFIFSALDAASPIFLALHQRFKTTAVREQGITLRPLLVSLVSLGARIP
GMEDVVARLKKDLALTDRHNPVDACSPVSDNMVSRLQQQQQQQQQQQQQQQQQQQQQQQQ
QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQDDASDLHDEIEKLLAGGSSL
DRNTMERLFQTIVQRLQAAWGGAAATKQRAYSTLLGRLRAFDAQCFDGLMVKWLMYLRAL
GSRPSVLRIFPLLVSVGCLEFGTILATASEFPTAGAGQQRVPVPPPATLAGGVPQVVQIT
YRTRYMQQVLMLLTAPVPQDDLLTADEAYRFLVLQDQAVRDSPKEVLNLIFLALAEYSYA
RAQNDLEGLPLDADYVQELLFELLKRLVLRDATGVARALSVRSTNPQVMARIDWMTTKLL
IPTAAAPQTTRVSFEQVLELTNEFTLPFCQVKLALALSLSNNNNNNNNNTTTTTTGEDGQ
EQQTSHVELLANAMDKAIAAGNVAWVGMLSSLSPDITQHLKARAQSRFLELLPSPPGKAT
GSSGRVAADQASLEQNLRMAENLLSVMDAIMRGGSNATSPIPPGGSPRQAQLSPAVVDKL
VDLWEILASPTSQPQDTKSEDTPMGNTPTVGVDPETKASLLLYHLPLLLNLLTLHNNTQS
SLDFSRQPADLRAKLLIACAGILHLLDHAVDLFELSRPPGPDNSASSSTGVIHPLPAEGE
LPAELAFPHPAQHGTVGGHDQGQDRQEKHTALARAVANLSRRVFDLACLLADNLPEEARL
TCVRAVGSGGVLALDGRLRYVLSVPWGVGFDVGVAGLQSGGQQQGQGDGAGSVFTAGGSG
GGGMGIGFGGSGGGLVLCHRDSGGAKPSSSASAPPGTRNPTINNNTNPNSHSHSHSNSNS
NSNSNISGTGTGTGSMCVLLGTPISLWGLDRPGGAATERFSVFHFRRWEALSEPTPVVGE
NDTALSLGLFEARKV
NT seq
5628 nt
NT seq
+upstream
nt +downstream
nt
atgacctcccggcccccattgggcgtgcagcaaccgcgaccgccccaacatcaacacacc
cacaagctgcccacgtcgagtctgtcgcagcgctcggcgcctcatcagcaccagcatcaa
catcaacactatctccaacaccagcagcaacgcgtgctcgcccagcagccaccgccgcag
cagcctcttccacaccaagcgcttcaacaacatgcctacccgctgcaacaacacgcacac
ttccccccgcaatcgcagtcgcccgtgcgtcgagacgtcaacggctatgatctgacgacg
accccagacttcggtgatggcgccgccgccatgccctctcgtcaaaccctccatcgccgg
cccgggtcgcgtctcaagctcgagatctacaacagcgacccggccgaccccacggccgca
tcgaccatcctacacgacacatcgctgacagaatccccgagctgcgttgccgactcgaag
ccctttaccccctcgcgcatcatgccccccatggatccgtccgagatgggcgacatgagc
ccggatccgtccacacacatgcacacagccgatcttgatgcccctctgcccatgcccgct
cgtccggcgcgcatcaataccgtcctgcctcaacgaccagccgcgcaaccgccggcggcc
tcgaacactaccagcaagaaggacagccgcccaaagcccttcaccgtcgagccgccggcc
gcagcaccgagctaccctgtgcgcggtaacgaccagcaaaagacgaccgtcgcatacgca
gacttcttcccctggacgggcaacggaccggaggatcagttctcggaacacgtgatccgc
aacggctactacgacaagggcatcttctcgacggccgagacacagtccgcgaaggcgacg
ctcttcccggcactgaagcacaagacaggtctgacggcgctgtcgtcggtctttgcggca
gtacttgggcagcgccggcataacggacagatcacgaccccgtccacgttcaaacccccg
ccgcgcgtgacgctgacggataccaagcgcgagctgtggcttaaggatcttgccaatccg
gctatttcgctgcgccgcctgagccggacgattccccatggtattcgcggcaaggtgctg
ttggagcaatgtctgaataagaatgtgcctacggaccgcgccgtttggttgatcaaatgc
gtcggggcgaacgagatccgcgctaccaagcgaaagggcgtgggcacgctcgtcgtgggc
ggcgagtcccgctggatcaaggactggacgatatcggtcgaacagttcatcgagcaggtg
tatttcgggttcgacgaagatgactggaaggctaaggtgcactataccacgcgtctggcc
gcgcatttgtatgccgagcatctgttggatcgggaacactattcggagtggcttgtttcg
agcctggagaacagttcggaggccaggctgccgatgtggatgcttctgacgcagctgtac
tggagcgacctgctcaagcttcgcaagtacggccgccggctggttacggcgctgattagc
caccatcacttgatatataaccaccctgatcgcgatattctcaatccccttctcaagacc
ctaaccgactgtcttaatacccttatcctgagcagtcccgagaactttgtctgccccgcc
gcgtggatcaagtaccgcgatgcgcttcaggcgtgtctgcccgccggtgacgaggcccga
cgcaactcgttcgaagccatcaacctccgcaacgaacagctcgccgcatcggccaaccgt
tcccagcccgctgcccgccacatcctggtgggcatgctagacgggaccctgcacgctccc
atgccatccgacctgccctcgcagtgctggagcgtttctcaagacaaaccagccctagcc
cgggccctgctcgaatggtgtacctccctctaccgccccggcctggccaaggtgtatgtc
acgagcaagatcctacagcattggagcacactcggcttcgacgtcacccttgccgtcctc
gattttctttgtgacgatcccctcgaggaacagccccgcaagaatgctctttaccatttg
gtctgcgagctcgtccgggcgtcgctgttcgcagtgtcgagatacatccgttggctgatg
ggccgtggaggggttcggcggccggagcaagttgcccctgacgggccggctgcgacgagg
ctgcttgctgagatgcctccttgtgtgctgacctcatcggaacgaaatcttcggagtggt
atcctcagacgtgcgtcgtatagtgtcgctgatgaggcggagaacacggttgttgcgatt
aagcatctgcgatatacctttggcatgcccatgccagatgtgcagccgaatgatcccatc
tttcagcggccgcctatggctatggccaagcttacgaagaggatttctaaagcgagtcgc
acgttgaagggggaggtcgggagctggcttcgggcgagtctggcttcttcttcttcttct
tcttcttcttcttcttcttctttttcttcttctacgggagacaaggagaaagggggccca
cagctacctgatgtctcaccctccgtcttctacggcatgcgctccgttcttgaggctgcc
gaggactttaccatactggcggatgtcctcaagacgcttaccaagcactgcaccgttgat
attctccccgctatcgccgacaccgtcaacagacattttttcatcttctctgccctcgac
gccgcatcaccaatcttcctcgccctccaccagcgcttcaagactaccgccgtccgcgag
cagggtatcaccctccgccctttactcgtctcgttagtgtcgttaggagcaagaatcccc
ggcatggaggatgttgttgcacggctcaagaaagaccttgccctcaccgaccgccacaac
cctgtcgacgcctgctccccggtctcggataacatggtctcgcgcctgcaacaacaacaa
caacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaa
caacaacaacaacaacaacaacaacaacagcagcagcagcagcagcagcagcagcagcag
cagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcaacagcagcag
gatgatgcttctgacctgcacgacgagattgagaagctgcttgcgggtggatccagtctg
gataggaatacgatggagcggttgttccaaacgattgtgcaaaggctgcaggctgcgtgg
gggggggccgcagcaaccaagcagcgggcttatagtacgctgttgggcaggctgagggcg
tttgatgcgcaatgttttgacgggttgatggtaaagtggttgatgtacctcagagcgttg
gggagcaggccgagtgtgctcaggatttttcctctgctcgtgtcggtggggtgtttggag
ttcgggacgatactggctacggcgtcagagtttcctactgctggcgctggacaacaacgg
gtccctgtcccgcctccagctacgcttgcggggggcgtaccccaggttgtgcagattacg
taccggacgaggtacatgcagcaggttttgatgctactcacggccccggtcccgcaggac
gatctacttactgccgacgaagcctaccgcttcctcgtgctccaagaccaagccgtccgc
gactcgcccaaggaagtcctcaacctgatcttccttgctctcgcagagtactcgtacgcc
cgcgcacaaaatgaccttgaaggcctccccctcgacgcagattacgtccaggagctgctg
ttcgaattactgaaaaggctcgtcctgcgcgacgcaacgggcgttgcgcgcgcgctgagc
gtcaggagtacaaatccgcaggtcatggctcgcattgactggatgacgaccaagttgttg
attccgaccgcggcagcaccccagacgacgcgggtctcgtttgagcaggtgctagagctg
accaacgagtttacgctaccgttttgtcaggttaagcttgcgctcgcgttgagtctgagc
aacaacaacaacaacaacaacaacaacactactactactactactggagaggatgggcag
gagcagcaaacgtcgcatgtggaattgttggccaatgcgatggataaggcgattgccgcg
gggaatgtggcttgggttgggatgctcagctcgctcagtccagatattacgcagcatttg
aaagctagggcgcagagcaggtttttggagttgttgccttcgccgccggggaaggctacg
ggttcttcggggagagttgctgcggaccaggcgtcgctggagcagaatctgcgcatggct
gagaatttgctctccgttatggacgccatcatgcgcggcggcagcaacgctaccagtccc
atccccccgggcggcagcccccgtcaagcacagctttctcctgccgtagtcgacaagctg
gtcgacttatgggagatcctcgcctccccgacctcccaaccccaagacaccaaatcggaa
gacacacccatgggcaacacgcccacagtcggagtcgaccccgaaaccaaggcctctctc
cttctctatcacctccccctcctcctcaacctcctcaccctgcacaacaacacccaatcc
tccctcgatttctcccgccaacccgccgacctccgcgccaagctgctcatcgcctgcgcc
ggcatcctgcatctccttgatcacgccgtcgacctcttcgaactctctcgccctcctggc
ccggataactccgcatcatcgtcgacgggggttattcatcccctcccggcggagggggag
ttacccgcggaactagccttcccacacccggcgcaacacggcaccgttggggggcatgac
cagggacaggataggcaggagaaacataccgcgttggcacgcgccgtggcgaacctctca
aggagggtgtttgacctcgcgtgtctgctggcagataacctgcctgaggaggccagactg
acgtgtgtgagagctgttggctcgggaggagtgttggcactggatgggcggttgaggtat
gtattgagtgtgccgtggggcgtggggtttgatgtgggtgttgcggggctgcaatccggg
gggcagcaacaaggtcagggggatggggcagggtcggtgtttaccgctggtggtagtggg
ggaggcgggatggggatcgggtttggtggttcagggggagggctggtgctttgtcatcgg
gacagcggtggtgccaaaccttcctcttctgcttctgctcctcctggcacgcgcaaccct
actattaacaataataccaatcccaactcccactcccactcccactccaactccaactcc
aactccaactccaacatctctggcaccggaacaggaacgggaagcatgtgcgtcctcctc
ggcacgcctatctccctgtgggggctcgatcgtcccggtggtgcggccacggaacggttc
agcgtgtttcatttccgtcggtgggaagcgcttagtgagccgacgccggtggtcggggag
aacgatacggcgctgagtttggggttgtttgaggctaggaaggtgtag
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integrated database retrieval system
