Thermochaetoides thermophila: CTHT_0015840
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Entry
CTHT_0015840 CDS
T03100
Name
(RefSeq) hypothetical protein
KO
K14315
nucleoporin NDC1
Organism
cthr
Thermochaetoides thermophila
Pathway
cthr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CTHT_0015840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cthr03019
]
CTHT_0015840
Messenger RNA biogenesis [BR:
cthr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CTHT_0015840
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
18255622
NCBI-ProteinID:
XP_006692087
UniProt:
G0S235
LinkDB
All DBs
Position
Unknown
AA seq
646 aa
AA seq
DB search
MAAAVRRSPYKDFLQPALQRRFATATLVVLATAYFEALLLARWSSWLWSWFPLGPTGFRA
ALFFLCGIFVIILRISQYHPGIRTSDSPIATLVRYAPRWTTFETLFTYALSAWIFSLVYL
GTVPDDAGFERITYFTYDRARLNEKPIFLTTHLVLLGIYQGVRHLYSDIDRLSLGTAQPS
NGDSSKATGEDGHVSTQMRRFRDQLPKIVVHSLHQSVMGLLLSASLYPLLLRDLLWRVNM
TMLRPLYSLPRTNVPPANLPYSPSTLLRCLAASVMVMFAWTAANTAFSLLLVKSPLKNGK
PLTADAKDPNGSLLNGLKNKKLSIKCFAMWELAYIARDFPDRRKAIFEDMDRKDGPMWSQ
VYKICLDTLHTLSSNIDAYTAPPAPATTPQQAETALGDKPRTSAPPKEDHIFAPLPSNKS
AFRTSVSSAFQNAALAGPGGPPASLSPVAKRTLHAARSRLLEAAAPNAEIEVTPSSFFRE
LALKYVLSSPLAGYPFRQTRRRRLASAVLGSPYGEPSLYVNAASAVSGLAVSSLREDRYG
HVQRDVASLIRELTSLGEKLNAFVNEGGMGKHWTDVVELEGEDKCEEVEEVVNAVKHALK
RVIVAFEPYARDLRLTRGEVKKAREVAGLEQEVEVREVMPEMVQIR
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgcagtccggcggtctccctataaagacttcctgcagcccgcgctgcagcgg
cgctttgccacggctacgctggtcgtgttggccaccgcatactttgaggccctgctgctg
gcgaggtggtcgtcatggctctggtcctggttccccctcggcccgaccggcttccgcgcg
gcgctcttcttcctctgtggtatcttcgtcatcatcctgcgcatctcgcagtaccacccc
ggtatacgcacttccgactcgccgatcgcgaccctcgtgcgctatgcgccacgctggacg
accttcgagacgctgttcacgtatgccctctccgcctggatcttcagtctcgtctacctc
ggcacggtgcccgacgacgcggggttcgagcgcatcacctatttcacgtacgaccgcgcc
cggctgaacgagaagcctatcttccttacgacccatctggtactactggggatttaccag
ggcgtgagacatctttactcggatattgaccgtttgtcgcttgggactgctcagccctct
aatggcgactctagcaaagcgactggcgaagatggccatgtgtcgacccagatgcgccgc
ttccgtgaccagctccccaagatagtcgtgcacagcctgcaccagtcggtcatggggctt
ttgttgagcgcatcactgtatccacttttgctgcgcgaccttctctggagggtcaacatg
acgatgctgcggccactttacagcctgccgcggaccaatgtcccgcctgccaacctccca
tactccccgtcgacccttctgcgctgcttggcagccagcgtgatggtcatgtttgcatgg
accgctgccaataccgccttctcgttgttgctggttaagagccccctaaagaacgggaaa
ccgttgacggctgatgcaaaggatccgaatggtagcttgctgaatgggttgaagaataag
aagctgtcgatcaagtgcttcgccatgtgggagctcgcctacatcgcacgcgacttccct
gatcgccgcaaggccatcttcgaagacatggaccgcaaagacggccccatgtggtcccaa
gtctacaagatctgcctcgacacgctgcacaccctctcttccaacatcgacgcttatact
gctcctccagcgccagcgactaccccccagcaggccgagacagccctaggagacaagcct
cgcacctccgccccgcctaaagaagaccatatcttcgcccctctcccctcaaacaagtcc
gctttccgcacctcagttagctccgcctttcaaaacgcagccctcgccggccccggcggc
ccgcctgcctccctcagccccgtcgcgaaacgcaccctccacgcagctcgttctcgcctg
ctcgaagcagctgccccgaatgccgaaattgaggtcacaccatcctctttcttccgcgaa
ctcgccctgaaatatgtcctgtcctcgccactggcggggtatcccttccgacagacgcgt
cggcgcaggctggctagcgcagtcctcggctcgccgtatggtgagccatcgctgtacgtg
aacgccgcatccgccgtgtccggcctagcggtgtcctcgctccgcgaggatcgatatggt
cacgtgcagcgggatgtggcgtctctaatcagggaacttacttccctgggggaaaaactc
aatgcctttgttaacgagggcggtatgggtaagcactggacggatgtggtggagctggag
ggggaggataagtgcgaggaggttgaggaagtggtcaacgcggtgaagcatgcgttgaag
agggttatcgtggcgtttgagccgtacgcgagagatttgaggctgacgaggggggaggtg
aagaaggcgagggaggtggcggggttggaacaagaggtcgaagttagggaggtgatgccg
gagatggtgcagattcggtga
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