KEGG   Thermochaetoides thermophila: CTHT_0015840
Entry
CTHT_0015840      CDS       T03100                                 
Name
(RefSeq) hypothetical protein
  KO
K14315  nucleoporin NDC1
Organism
cthr  Thermochaetoides thermophila
Pathway
cthr03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cthr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    CTHT_0015840
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cthr03019]
    CTHT_0015840
Messenger RNA biogenesis [BR:cthr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     CTHT_0015840
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 18255622
NCBI-ProteinID: XP_006692087
UniProt: G0S235
LinkDB
Position
Unknown
AA seq 646 aa
MAAAVRRSPYKDFLQPALQRRFATATLVVLATAYFEALLLARWSSWLWSWFPLGPTGFRA
ALFFLCGIFVIILRISQYHPGIRTSDSPIATLVRYAPRWTTFETLFTYALSAWIFSLVYL
GTVPDDAGFERITYFTYDRARLNEKPIFLTTHLVLLGIYQGVRHLYSDIDRLSLGTAQPS
NGDSSKATGEDGHVSTQMRRFRDQLPKIVVHSLHQSVMGLLLSASLYPLLLRDLLWRVNM
TMLRPLYSLPRTNVPPANLPYSPSTLLRCLAASVMVMFAWTAANTAFSLLLVKSPLKNGK
PLTADAKDPNGSLLNGLKNKKLSIKCFAMWELAYIARDFPDRRKAIFEDMDRKDGPMWSQ
VYKICLDTLHTLSSNIDAYTAPPAPATTPQQAETALGDKPRTSAPPKEDHIFAPLPSNKS
AFRTSVSSAFQNAALAGPGGPPASLSPVAKRTLHAARSRLLEAAAPNAEIEVTPSSFFRE
LALKYVLSSPLAGYPFRQTRRRRLASAVLGSPYGEPSLYVNAASAVSGLAVSSLREDRYG
HVQRDVASLIRELTSLGEKLNAFVNEGGMGKHWTDVVELEGEDKCEEVEEVVNAVKHALK
RVIVAFEPYARDLRLTRGEVKKAREVAGLEQEVEVREVMPEMVQIR
NT seq 1941 nt   +upstreamnt  +downstreamnt
atggcggctgcagtccggcggtctccctataaagacttcctgcagcccgcgctgcagcgg
cgctttgccacggctacgctggtcgtgttggccaccgcatactttgaggccctgctgctg
gcgaggtggtcgtcatggctctggtcctggttccccctcggcccgaccggcttccgcgcg
gcgctcttcttcctctgtggtatcttcgtcatcatcctgcgcatctcgcagtaccacccc
ggtatacgcacttccgactcgccgatcgcgaccctcgtgcgctatgcgccacgctggacg
accttcgagacgctgttcacgtatgccctctccgcctggatcttcagtctcgtctacctc
ggcacggtgcccgacgacgcggggttcgagcgcatcacctatttcacgtacgaccgcgcc
cggctgaacgagaagcctatcttccttacgacccatctggtactactggggatttaccag
ggcgtgagacatctttactcggatattgaccgtttgtcgcttgggactgctcagccctct
aatggcgactctagcaaagcgactggcgaagatggccatgtgtcgacccagatgcgccgc
ttccgtgaccagctccccaagatagtcgtgcacagcctgcaccagtcggtcatggggctt
ttgttgagcgcatcactgtatccacttttgctgcgcgaccttctctggagggtcaacatg
acgatgctgcggccactttacagcctgccgcggaccaatgtcccgcctgccaacctccca
tactccccgtcgacccttctgcgctgcttggcagccagcgtgatggtcatgtttgcatgg
accgctgccaataccgccttctcgttgttgctggttaagagccccctaaagaacgggaaa
ccgttgacggctgatgcaaaggatccgaatggtagcttgctgaatgggttgaagaataag
aagctgtcgatcaagtgcttcgccatgtgggagctcgcctacatcgcacgcgacttccct
gatcgccgcaaggccatcttcgaagacatggaccgcaaagacggccccatgtggtcccaa
gtctacaagatctgcctcgacacgctgcacaccctctcttccaacatcgacgcttatact
gctcctccagcgccagcgactaccccccagcaggccgagacagccctaggagacaagcct
cgcacctccgccccgcctaaagaagaccatatcttcgcccctctcccctcaaacaagtcc
gctttccgcacctcagttagctccgcctttcaaaacgcagccctcgccggccccggcggc
ccgcctgcctccctcagccccgtcgcgaaacgcaccctccacgcagctcgttctcgcctg
ctcgaagcagctgccccgaatgccgaaattgaggtcacaccatcctctttcttccgcgaa
ctcgccctgaaatatgtcctgtcctcgccactggcggggtatcccttccgacagacgcgt
cggcgcaggctggctagcgcagtcctcggctcgccgtatggtgagccatcgctgtacgtg
aacgccgcatccgccgtgtccggcctagcggtgtcctcgctccgcgaggatcgatatggt
cacgtgcagcgggatgtggcgtctctaatcagggaacttacttccctgggggaaaaactc
aatgcctttgttaacgagggcggtatgggtaagcactggacggatgtggtggagctggag
ggggaggataagtgcgaggaggttgaggaagtggtcaacgcggtgaagcatgcgttgaag
agggttatcgtggcgtttgagccgtacgcgagagatttgaggctgacgaggggggaggtg
aagaaggcgagggaggtggcggggttggaacaagaggtcgaagttagggaggtgatgccg
gagatggtgcagattcggtga

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