Thermochaetoides thermophila: CTHT_0016860
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Entry
CTHT_0016860 CDS
T03100
Name
(RefSeq) putative eukaryotic translation initiation factor
KO
K11593
eukaryotic translation initiation factor 2C
Organism
cthr
Thermochaetoides thermophila
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cthr03019
]
CTHT_0016860
03036 Chromosome and associated proteins [BR:
cthr03036
]
CTHT_0016860
Messenger RNA biogenesis [BR:
cthr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
CTHT_0016860
Chromosome and associated proteins [BR:
cthr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
CTHT_0016860
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
CTHT_0016860
microRNA pathway
RISC loading complex
CTHT_0016860
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoN
ArgoL2
PAZ
ArgoL1
ArgoMid
Motif
Other DBs
NCBI-GeneID:
18255724
NCBI-ProteinID:
XP_006692188
UniProt:
G0S2D6
LinkDB
All DBs
Position
Unknown
AA seq
947 aa
AA seq
DB search
MTATSEGKKNKSVELKVPEGLNKRCDLPPEAYWMADQHQTPFARRPKYSTAGTPAKVTVN
QFRVRAVKSNDIYQFDVAIDPEPKGTVVYKKVWASDIVQQKLKSTRNLWLHDGRKLAWSR
ANVDQFSVNVDLGAAEGHPGKANNIFTLKVRRSTKIRMESLMAYLRGQAAWSNSVLECIN
FLDHALRQGPSERMIQIKRSFFNENSETRRLSPFTEAIKGIYAAVRLNDSLSTGGIGLGI
NVDVTNQTFWTGQGLIPLVRSYLGAVDRRWDNLSDDMLIKELRPVNKKGVFEKSEAFQAL
KRLRGLTFEITHRDKDRGRVEFKIDKFLFEATPDGGSARKTEFKRRIKGTDQTEKISVAN
YYAQEYKIRLRYPDLPLVQTGKGALFPMELCQVVRFNRYNFKLDPQQTSEMIKFAVQRPP
ERKREVLNMVQNLDWGRDPYLREFGISIADQPAQVEARVLPNPYVHYAADSMPKNPEQRG
RWDLRGVRFRNMPTALRSWALVAVDRSIDNASLVNFGREFKKIWINHGGRVEAEPYIFTP
PPNMPHAELVQRAYTATGQHNKQTPQIIFFILREKSTFLYERLKKNAECRFAIPTQMIQA
FQARKANAQYISNVCLKVNAKLGGQNCRVTPHMSKEHTPMFKAPTMMIGVDVSHGGHTSG
TGAPSIAAMCVSMDRDAAIYSAAVQTNGWGVEIVQPHNMHSMLAPILSKWARKHNRAPDH
VFYLRDGVSEGQFAHVMEWELRTLRTVFEQYMKAKPKITVIICTKSHHIRFFPERGDRNG
NPLPGTLVEREVTHPFHYDFYLCSHAAIQGTARPVHYNVIHDEVKMDPAELQRLLYNQCY
QYCRSTTPVSLHPAVYYAHLAAGRGVAHIDQDLPPAGQTEQQSTTVDNNPMSLPVLKRGM
MAKSDSKTTKTSSSDDTSSLPRPLIKPGQRGGRADAIMAFENSMWWV
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccacgagcgaggggaagaagaataagagcgttgagctcaaggtgcccgagggc
ctcaataagcgctgcgatctccctcccgaggcttattggatggcagaccagcaccaaaca
ccgtttgctcgtcgtcccaagtacagcactgccggcaccccggccaaggtcaccgtcaac
cagttccgcgttcgtgccgtcaagtctaacgatatctaccagttcgacgtggctattgac
cctgagccaaaaggtaccgttgtctacaagaaagtatgggctagcgatatcgttcagcag
aagctcaagagcacccgcaacctctggctacacgatggtcgcaagctggcctggtcccgg
gccaatgtggaccaattctcggttaatgttgacctcggcgccgctgagggtcaccctggt
aaggccaacaacattttcaccttgaaggtgcgccgcagcaccaagattcgcatggagtcc
ttgatggcctatctccgcggccaggcggcgtggagcaactcggtcttggagtgtatcaac
ttccttgaccatgccctgcgccagggtccatcggaacgcatgattcagatcaagcgctcc
ttcttcaacgagaactcggagactcgccgcctcagccccttcaccgaggccatcaagggc
atctatgccgccgtccgcttgaatgactcgctcagcacgggcgggattggcctaggcatc
aacgtcgatgtcaccaaccagacattctggaccggtcagggtctgattcctctggtccgc
agctatctgggcgctgtcgatcgccgctgggacaacttgtcggacgacatgctcatcaag
gaactgcgccctgtcaataagaagggcgtcttcgagaagtcggaggctttccaggccctg
aagaggttacgcggcctcacctttgagatcacgcaccgcgacaaagatcgtggtcgcgtt
gagttcaagattgacaagttccttttcgaggccaccccagacggcggcagtgcccgcaag
actgagtttaagaggaggatcaagggtactgatcagacagagaagatctctgtcgccaac
tactatgcccaggagtacaagatccggcttcgctacccggatctgccgctggtccagacg
gggaagggcgcgctcttccccatggagctctgtcaggttgtgcgcttcaaccggtacaat
ttcaagctcgacccgcagcaaacgtccgagatgattaagtttgccgtgcagcgacctccc
gagcgcaagagggaggtactgaacatggttcagaacctcgactggggccgcgacccctac
ttgcgtgagtttggtatttccatcgccgaccagccggcccaggtggaggctcgcgtgctt
cctaacccgtacgtgcactacgcggctgattccatgcccaagaaccctgagcagaggggc
cgctgggatcttcgtggcgtccgcttccgcaacatgcctaccgccctgcgctcgtgggcc
ctggtggcggtcgaccgctccatcgacaatgcctcgcttgtcaactttggccgcgagttc
aaaaagatatggatcaaccatggcggcagggtcgaggccgagccctacatctttacgccg
cccccgaacatgccccacgccgagttggttcagagggcttatacggccactggccagcac
aacaagcagacgccccaaatcatattcttcattctccgcgagaagtcgacgtttctgtac
gagcgactcaaaaagaatgccgagtgtcgcttcgccatcccgacgcagatgatccaggcc
ttccaggcgcgcaaggccaacgcccagtatatctccaacgtctgcctcaaggtgaacgca
aaactgggcggtcagaactgccgcgtcacgccgcacatgagcaaggagcatacgcccatg
ttcaaagcgccgaccatgatgattggcgtcgatgtgtcgcatggcggccacacgtcgggc
acgggcgctccgtccatcgcggccatgtgtgtctcgatggatcgcgatgccgctatctac
agcgctgccgtccagaccaacggctggggtgtcgagattgtacagcctcacaacatgcac
tccatgctcgcccccatcctcagtaagtgggcccgcaagcacaaccgcgctcccgatcac
gtcttttacctgcgcgacggcgtatcggagggccagtttgcccatgtcatggagtgggag
ctccgaaccctgcgcacagtgtttgagcagtacatgaaggcgaagcccaagattaccgtc
attatttgcaccaagagccatcacattcgtttcttccccgagcgcggcgaccgcaacggc
aacccgctgcccggcacgctggtcgagcgcgaggtgactcaccctttccactacgatttc
tacctatgctcgcacgccgccatccagggtaccgctcgccccgtccactacaacgtgatt
catgacgaggtcaagatggatcccgccgagctgcagcgcctgctctacaaccaatgttat
cagtactgccgctcgaccacgcctgtctctcttcacccggccgtgtactacgcccatcta
gcggctgggcgcggcgtggcacatattgaccaggatcttccgccggccgggcagacggag
cagcagtctactactgtcgacaacaatcccatgtctctgccggtgctcaagcgcggcatg
atggctaagtcagatagcaagacgaccaagacgtcttcgtcggatgatacttcatcatta
cctcgtccactcatcaaacctggtcagaggggcggtcgtgcagatgcgattatggcgttt
gagaattcgatgtggtgggtgtga
DBGET
integrated database retrieval system
