Thermochaetoides thermophila: CTHT_0016880 Help Entry CTHT_0016880      CDS       T03100                                  Name (RefSeq) putative mRNA 3'-end protein   KO K14408   cleavage stimulation factor subunit 3 Organism cthr  Thermochaetoides thermophila Pathway cthr03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:cthr00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     CTHT_0016880  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cthr03019]     CTHT_0016880 Messenger RNA biogenesis [BR:cthr03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage stimulation factor (CSTF) complex      CTHT_0016880 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Suf HAT_PRP39_N HAT_PRP39_C HAT_Syf1_CNRKL1_N TPR_16 TPR_14 TFIIA Sigma70_ner HAT UTP6_C mTOR_dom HAT_Syf1_CNRKL1_C Motif Other DBs NCBI-GeneID:  18255726 NCBI-ProteinID:  XP_006692190 UniProt:  G0S2D8 LinkDB All DBs Position Unknown AA seq 1112 aa AA seqDB search MADDYDPAQTPWPENSGYVEPNPDNAQPDTTQQAEYNVGSEISAAAEEPEYDPASLPLTT DPAPAPQATSLSPQVPAAEVPLRPSPQRAAPPKKKPRTAGGFIADSDSEDEATAKNAPAQ SATDNADAAEYGAAAKPAALVPESTTTTPMPPPVPTVDRIAQLEDRVREDPRGAMDAWLG LILEHRARNDIEKARATYERFFAVFPQAADVWVDYLNMELELNNFPEAEAIFNKSLISTP NVNLWTKYLDYIRRRNDLNDPTGAARTTVARAYEFVIDNIGLDKDSGKIWADYIQFLKFG PGTVGGNQWQDQQKMDQLRKAYQRAVCVPIANVNTLWKEYDQFEMGLNKLTGRKYLAEKS PSYMSAKSANTALENITRGLQRTTLPRLPPAPGFDGYEEYMQQVEIWKKWIAWEKSDPLD LKDDKDQPGLYHKRILYVYNQALMALRFWPEMWVDAAQWCFDNDIRNKDGSSAGLDFLTR GIEANPESVLLALKHGDYIESTYPAEESDEAKIARGKAVRAPYDKVLDTLYGIIKGLKDR ESAEVARLEEQAKAAEAAAAQQQQSKSDEEDDDDEDQARADNSPKAKVQEQIRAVKQAYA AQTQVLSRTISFVWIALIRAMRRIQGKGKPNTELGGMRQAFQDARHRGRLTSDVYAEVAK LEWHIYKDPAGGKIFDRGAKLFPEDENFALENIKYLHSRDDFTNARVLFETVVNRLTSKP ETVHKAKPLYAYFHKYESQYGELAQITKLEKRMAELWPDDPKLATFSARYSTEKFDPIAA QIIVSPLTQLRPKKALLLQSIEQPSTTSTQSSPAPQQPPLPSAARASPAPTAVLSSAANI TNSPKRPLPADDFDDGGPSASGNPPRKIPRANDYTEFVRGASPLKGAAGRRLDQQRRLGG QAATSAPPIARDITFLLSQIPRAEFYDGPRFDPRRVVGLLGAVTVPEYAVWKQQQQQQQQ QQQQQQQQQQQQQQQQQQQQQQQQGQPRYGGEWRRGEERSQSPYTGSRGGGYRPPPPTAV VGARPGSAAGGGGYEPPPPGVPTAAAGSFTLPQPTGYGSFETGAAAPSWPPVAAYPPPAG IPPQGGPPPGGFTAGAPGGYVPPPTGQGGRYY NT seq 3339 nt NT seq  +upstreamnt  +downstreamnt atggccgacgactacgaccccgcccagaccccgtggcccgagaatagcggctacgtcgag cccaaccccgacaatgcccagcccgacactacccagcaggccgagtacaacgttggctcc gaaatctctgccgcggccgaggagcccgagtatgatcccgcctcgctgcctctcacgacc gacccagctccagctcctcaagctacttcgttgtccccccaggtcccagctgccgaggtg cccctacgcccatcgccccagcgcgccgcgcccccgaagaagaagccgcgcactgccgga gggttcattgcggattcggattccgaggacgaagccactgcgaagaatgcgcctgctcag tctgctaccgacaatgccgatgctgcggaatatggtgctgccgcgaagcctgctgcactc gtgcccgagagcactacgaccacgcctatgccgccgcctgtcccgaccgttgacaggatc gcccagctagaggatcgcgtacgcgaggatccccgaggtgccatggatgcgtggttgggt ttgatcctcgagcatcgcgctagaaacgacatcgagaaggccagggcgacgtatgagcgg ttctttgccgtcttcccgcaggctgccgacgtctgggtcgactatctcaacatggagctc gagctcaacaacttccccgaggccgaggccatcttcaacaagtcactcatctcaacgccc aacgtcaacctctggaccaagtacctcgactacatccgccgccgcaacgacctcaacgac ccgaccggcgccgcgcgcacgactgtcgcccgcgcctacgagtttgtcatcgataacatc ggcctcgacaaggactcgggcaagatctgggccgactacatccagttcctcaagttcggc cccggtaccgtcggcggcaaccagtggcaggaccagcagaagatggaccagctgcgcaag gcctaccagcgcgccgtctgcgtgcccattgctaacgtgaatacgctctggaaggagtac gaccagttcgagatgggccttaacaagctcaccgggaggaagtatttggccgagaagtcg ccttcttacatgtcggccaagagcgccaacacagctcttgagaatatcacccgtggctta cagcgcacgacgctccctcgcctgccccccgccccgggctttgacggttacgaggagtac atgcagcaggtcgagatctggaagaagtggatcgcctgggagaagtctgaccctctggac ctcaaggacgacaaggaccagccgggcctgtaccacaagcgtattctctacgtctataac caggcactcatggcactgcgcttctggcccgagatgtgggtcgacgcggcccagtggtgc ttcgacaacgacatacgcaacaaggacggcagctcggccggcctggatttcctgactcgt ggtattgaagccaacccagagagcgtcctgctcgcgctcaagcacggcgattacatcgaa tcgacctaccccgccgaagagagcgacgaggccaagatcgcgcgcggcaaggcggtgcgc gcgccctacgacaaggtcctggacacgttgtacggcatcatcaagggcctgaaggaccgc gagagcgctgaggttgcccgcctggaggagcaggctaaggcggccgaggcggccgccgcg caacagcagcagagcaagtctgacgaagaggacgatgatgacgaggaccaggcgcgcgcg gacaattcgcccaaggctaaagtgcaggagcagatccgcgcggtcaagcaggcgtatgcc gcgcagacgcaggtgttgtcgaggacgatttcgtttgtgtggatcgcgcttatcagggcg atgcgtcgcattcaggggaagggcaagccgaataccgaattaggagggatgaggcaggct ttccaggatgctaggcaccggggacgattaactagtgatgtgtatgcggaagttgccaag ttggagtggcatatttataaggacccggcgggcggtaagatttttgacaggggcgcaaag ttgttcccggaagatgagaactttgcgctagagaatatcaagtatttgcattcgagggat gattttacgaacgcccgcgtcctcttcgaaacagtcgtcaaccgactcacctccaaaccc gagaccgtccacaaggccaagcccctctacgcctacttccataagtacgagtcccagtac ggcgagctagcccaaatcaccaagctcgaaaagcgcatggccgagctctggcccgatgac cccaaactcgccaccttcagcgcgcgctactcaaccgagaagttcgaccccatagccgcg cagatcatcgtctctcccttgactcagctccgtcccaagaaagccctcctcctccagtcc atcgagcaaccttccacgacatctacacagtcctctcccgccccgcaacaaccccccctc ccttcagctgctcgtgcgagccccgcccctactgctgtcctctcctcagcagcaaatatc accaactcccccaagcgtcccctccccgccgacgacttcgatgacggcgggccttcagcg tccggcaatcccccgcgcaagatcccccgcgcaaacgactacaccgagttcgtgcgcggc gcatccccccttaagggagccgccggccgcaggctcgaccaacagcgtcgcctcggcggg caggctgctacctcggcaccgccgatcgcgagggatattacctttttgctgtcgcagatt ccgagggcagagttttacgacgggccgaggtttgatccgcgcagggtggtagggttattg ggcgccgtgacggttcccgagtatgcggtttggaagcaacagcaacaacaacaacagcag cagcagcaacagcagcagcagcagcaacagcaacagcagcagcaacagcagcaacaacag caacagcagcaggggcaacctagatatggcggggagtggaggagaggtgaggagaggagt cagagtccttatactggctccaggggcggagggtacaggcctcctcctccgacggctgtg gtaggtgctaggcccgggagtgcggctggtgggggtggatatgagccccctccgccgggt gtgccgactgcggccgcagggagcttcacgttgccacagccgacggggtatgggtctttt gagacgggtgccgctgcgccaagttggccgccggttgcggcttatcccccgccggctggg atccctcctcagggggggccgccgccggggggttttactgcgggggctcctgggggttat gtgccgcctccgacggggcagggagggaggtactattaa

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