Thermochaetoides thermophila: CTHT_0016900
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Entry
CTHT_0016900 CDS
T03100
Name
(RefSeq) hypothetical protein
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
cthr
Thermochaetoides thermophila
Pathway
cthr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CTHT_0016900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cthr03009
]
CTHT_0016900
Ribosome biogenesis [BR:
cthr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CTHT_0016900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nrap_D4
Nrap_D5
Nrap_D2
Nrap
Nrap_D3
Nrap_D6
BMF
Motif
Other DBs
NCBI-GeneID:
18255728
NCBI-ProteinID:
XP_006692192
UniProt:
G0S2E0
Structure
PDB
PDBj
LinkDB
All DBs
Position
Unknown
AA seq
1171 aa
AA seq
DB search
MDAAPAKRRKIAHPDGNASIALEAAQAAATGVSRARAFVLETEEMLDSVDLDYSEAFDGA
DALLHRLKGSIETIPAHDAQPLLDAAAKLEKKHKLKVPFPSPPPPQNSNYKVSFATPAQF
NVVGSYVAKTMVRTQSAHGIDMIVVLPESILQEKDYLDLRYFYKRAYYLAVVAAHLQKDL
KGEATLSYEYHNGNSLLPVLSVKPNGEKDEDEKKKKKGVLDYRIRIIPCAPESFFPRQKL
HLGAGLVRKHKEGEQQANGQPATPATPFYNSTLVAESSYLQYLKLLRQTEKKCAAFRNAC
ILGRIWLQQRGFGSDVSKGGFGYFEWAVLLALLLQGGPADTKGAAPLSPSLSSTQLFKAL
IQFLSVTNFAEKPCVLGQAKPDLAGFIENGPILWDSARQLNIAFKMGPWSADLLHQHARW
TRKLLADGAVDQFQPTFILKADLPTHTYDLVARMDPEKVSEAAPDKVAHEARGRHWQVGH
KVYRILRRALSDKNMEGGERARLIHLKVSPGFSSSSWSLNEKPQPQKAGTPIEIGVLFDP
LNMARTVDRGPSAGPSAEEKETCEKFRRFWGEKSELRRFGGDTIRETLVWSAQTPFDLCE
EIMRYILGLHLRVGQLQDDIVFYGRSLPALLSIKPSDTALFNVARKTFTSFERDLRDLED
LPLRIRHVNPICPELRHSSLKTPSFGPSKSGPRPMEVVISFEASGKWPESLIAIQRTKIA
FLLMIGRLLERFKPGEIRTHVGLDDARYETENLAFLDVIYASGACFRVRIQADLEESLLE
RQTKDKTTEQYLRQRASTQLASFRRTFVHLPLHTQYITTATTRFPALSPTIRLVKHWFSV
HKLSNHFPPELLELFVLHTFLAPYPWDVPSSPTTGFLRTLLFLARWDWRTDPLIIDTSLN
GELPAQERQAIATRLDAWRKLDPGMQHTVLFVATAHEQSGTMWTSVDGHPRPSKVVAARM
TALAKSAARVIREQGVDLDVRRLFVPSLKEYDVLLYLNTKVLKSALRTYITVDPATEMNG
GKGQEIKFKNLAPETVEPPLPVAQHPVDVLLKQLSAVYDSAAGASGTGPLVFFRSDTTAT
EEGDKVIGAVWNPTLVKRKWRVNLPTSYKPVAGGKDESEDEDEDEDEDGSEREKEREGEG
RVEVEVNREGILAEVARIAGEVVERIEVKGL
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgcacccgccaaacgcaggaaaattgctcaccctgacggcaatgcctcgatc
gccctcgaggccgcccaggcggcagcgacaggcgtctcccgggcgcgcgccttcgtgctc
gagaccgaagagatgctcgactcggtcgacctggactactccgaggccttcgatggcgcc
gacgccctgcttcaccggctgaaaggctccattgagacgattcccgcccacgatgcccag
ccgctgctcgatgcggctgcgaagctcgaaaagaagcacaagctcaaggttcccttcccc
agcccgccgccgccgcagaactcgaattacaaggtttcgttcgccacgccggcgcagttt
aatgtcgtgggcagttacgtggccaagacgatggttcgcacgcagagcgcgcatggaatt
gatatgatcgtggtgctgcccgagagtatcctgcaggagaaggattatctggacttgagg
tacttctacaagagagcgtattaccttgctgtggtggctgctcatctgcagaaggatctg
aagggggaggctacgttgagctatgagtatcataatggcaactcgttgttgccggtgctc
tcggtcaagcccaatggcgagaaggacgaggatgagaagaagaagaagaagggcgtgctc
gactacaggatacgcatcatcccttgcgcccccgagtccttcttcccgcgccagaaactg
cacctgggagctgggctggttcgtaagcacaaggagggggagcaacaggccaacgggcag
cctgcgacacctgctacccctttctacaactctactctggtcgccgagtctagctacctc
caatacctcaagctgctgcgccaaacggaaaagaagtgcgctgccttccggaacgcctgc
atccttggccgcatctggcttcagcagcgcgggttcgggagtgatgtgtccaagggcggc
ttcggatactttgaatgggctgtccttttggctcttttgctccaaggagggccggccgat
accaagggggccgccccgctctcgccgtcactcagcagtactcagctgttcaaggcgctc
atacagttcttgtcagtcaccaactttgccgagaagccgtgcgtgctgggccaagcgaag
ccagatctggcgggcttcattgagaacggaccgatcctctgggactcagcccgccagctg
aacatcgccttcaagatggggccctggtcggccgacctgctgcatcagcacgcccggtgg
acgcgcaagctgctcgctgacggcgctgtggaccagttccagccgaccttcatcctcaag
gccgacctgccgacacatacctatgatctggtggctcgcatggaccccgagaaggtatcc
gaagcagcgccggacaaggtcgcccacgaagcgcgcggccggcactggcaggtcggccac
aaggtctatcgcatcctgcgccgtgcgctgtctgacaagaacatggaaggcggcgagcgc
gcccgcctgatccaccttaaggtgtcgccgggcttctcgtcctcgtcctggtctttgaac
gagaagccccagccgcaaaaggcgggcacccccatcgagatcggcgtgctcttcgatccg
ctcaacatggcacgcacagtggaccgcggtccgtcggcaggccctagcgcggaggagaag
gagacgtgcgaaaagttccgccgcttctggggcgaaaagtcggagctgcggcgttttggt
ggtgataccatccgcgagacgttggtgtggtcggcgcagacgccgttcgatctctgcgaa
gagatcatgcgctacattttggggctacacctgcgggtcggccagctgcaggacgatatc
gtgttctatggtcgttcccttcccgcgctgctctccatcaagccgtccgacacggcgctg
ttcaacgtcgcccgcaagaccttcacctccttcgagcgcgacctccgcgacctggaggac
ctcccccttcgcatccgccacgtcaaccccatttgccccgagctgcgccattcctccctc
aaaaccccctccttcggcccctctaagtcaggccctcgccccatggaggtagtcatctcc
ttcgaagcctccggcaaatggcccgaaagcctgatcgcgatccagcgcaccaagatcgcc
ttcctgctcatgatcggccgcctcttggagcgcttcaagcccggtgagatccgcacccac
gtcggcctggacgacgcccgctacgaaacggagaacctggccttcctcgacgtgatctac
gcctcaggcgcctgcttccgcgtccgcatccaggctgatctcgaagagtccctgcttgag
aggcagaccaaggacaagacgactgagcagtatcttcgccagcgggcgtctacccagttg
gcctccttcaggaggacgtttgtgcatctacccctccacacgcaatacatcaccaccgcg
acaacccgcttccccgctctgtccccaaccatccgcttggtaaaacactggttcagcgtg
cacaaactctccaaccacttcccgcccgaactcctcgagctctttgtgctccacaccttc
ttggccccttacccatgggatgtgccctcctcccccacaaccggcttcctccgcactctc
ttattcctcgcccgctgggactggcgcaccgaccctcttattatcgatacctcgctcaac
ggggaattacccgcgcaagaacggcaggctatcgccacaaggctggatgcgtggcgcaag
ctggaccccggcatgcagcacaccgtgctcttcgtcgctacggcacacgaacaatccggt
acgatgtggacttctgtcgacggacacccccgcccgtcgaaggtggttgcggcgaggatg
accgcgctggcgaaatctgctgcgcgggttattcgtgagcagggcgttgatctggacgtg
aggaggctgtttgtgccgagtttgaaggagtacgacgtgctgctgtatctcaacaccaag
gtcctgaagtcggcgctgcggacgtacatcaccgtcgatcccgcgacggaaatgaacggg
gggaaagggcaggaaatcaagttcaagaaccttgcccccgagacggtggagcccccgtta
ccggtggcacagcacccagtggatgtgttgctcaagcagctgagcgcagtctatgactcc
gccgccggggcatcgggcacagggccgttggttttcttccgcagtgatacgactgccaca
gaggaaggggataaggtcattggcgcggtgtggaacccgacgctggttaagcgtaaatgg
cgtgttaaccttccgacatcatacaagccggtggctggggggaaggatgagagcgaggat
gaggatgaggatgaggatgaggatgggagtgagagggagaaggagagggagggagagggg
agagtggaggttgaggtgaatcgggaggggatcttggctgaggtggcgaggattgcggga
gaagttgtggagaggattgaggtgaaggggttgtag
DBGET
integrated database retrieval system
