KEGG   Thermochaetoides thermophila: CTHT_0018840
Entry
CTHT_0018840      CDS       T03100                                 
Name
(RefSeq) 40S ribosomal protein S27a-like protein
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
cthr  Thermochaetoides thermophila
Pathway
cthr03010  Ribosome
cthr04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cthr00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    CTHT_0018840
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    CTHT_0018840
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:cthr03011]
    CTHT_0018840
   04121 Ubiquitin system [BR:cthr04121]
    CTHT_0018840
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cthr04147]
    CTHT_0018840
Ribosome [BR:cthr03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    CTHT_0018840
  Archaea
    CTHT_0018840
Ubiquitin system [BR:cthr04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   CTHT_0018840
Exosome [BR:cthr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   CTHT_0018840
  Exosomal proteins of colorectal cancer cells
   CTHT_0018840
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 DUF2604 TBK1_ULD Ubiquitin_5 IBR Dsc3_N Cytochrome_C7 OTU1_UBXL Fer2_3
Other DBs
NCBI-GeneID: 18255922
NCBI-ProteinID: XP_006692377
UniProt: G0S2X5
Structure
LinkDB
Position
Unknown
AA seq 154 aa
MQIFVKTLTGKTITLEVEPSDTIDTVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKVYTTPKKIKHKRKKVKLAVLKYYKVDSDGKIERLRRE
CPNESCGAGVFMASMQDRQYCGRCHLTYVFDKSS
NT seq 465 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaagaccctcacgggtaagaccattaccctcgaggtcgagccctcg
gacaccatcgacactgtcaagtccaagatccaggacaaggagggcatccccccggatcag
cagcgcctgatctttgcgggcaagcagctcgaggatggccgtaccctctccgactacaac
atccagaaggagagcaccctccaccttgtgctccgcctgcgtggtggtgccaagaagagg
aaaaagaaggtctacaccactcccaagaagatcaagcacaagcgcaaaaaggtcaagctg
gccgtccttaagtactacaaggtcgatagcgacggcaagattgagcgcctgcgccgcgag
tgccccaacgagagctgcggtgccggtgtcttcatggcctctatgcaggaccgtcagtac
tgcggccgctgccacctcacctatgtcttcgacaagagctcttaa

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