Entry |
|
Name |
(RefSeq) hypothetical protein
|
KO |
K11771 | SWI/SNF chromatin-remodeling complex subunit SWI1 |
|
Organism |
cthr Thermochaetoides thermophila
|
Brite |
KEGG Orthology (KO) [BR:cthr00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:cthr03021]
CTHT_0020070
03036 Chromosome and associated proteins [BR:cthr03036]
CTHT_0020070
Transcription machinery [BR:cthr03021]
Eukaryotic type
RNA polymerase II system
Coactivators
SWI/SNF complex
CTHT_0020070
Chromosome and associated proteins [BR:cthr03036]
Eukaryotic type
Chromatin remodeling factors
SWI/SNF complex
CTHT_0020070
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
1240 aa
MNSSWISDSAAVPSAVPNHNGNGFPQLSDPSAVAAGNMMDPSAFMANPAQFNAQFANPQQ
IVMQPNGPGPGAGPSAPGAPGGPAGPAGPMRNASPSFPNPMYQTNSVVPSKRPRPREDGM
AQSPRPAPGMLPTSRAETPQQSGFQGFQQPPITQPPSTQPSPYPHLQTNGSTNATPSPIM
ANQMRPGSVPQRVASSSPHPFSPAAQQFPQTPSMPSEHGGTPQPFMQQNAFQQNFNPQFA
PGQSPARPSPTPNPIAGQMMPQQMGQVPGQMPGQMPGQMAGQIPGQMAGQMPGQMPGQMP
GQMPGQMPGQMPGQMPGQMGQLPQQMQMAGQIPGQIPGQMPGQLPGQMMPGQLPGQMPGQ
LPGQVPGQIPGQLPGQMPGQMPGQMPVQLPGQMPGQMPGQMVGQVPNIMLQQQLAQARNP
LEQQKILYQMQLQQQQLQRASIQMQQMAAGQNMMQAQPGPNQAQAQARNMMAAAPRPGMP
NGQIPPGAMRPQPGMAPQPLRAPPPDQFMKHLTTFMSSKVLPFEMNPVIEGRQISLYNLF
AIVYTKAGGYRSVTQNNAWVQVAQAMGFQPSQLPSAAQQLRAAYERNLVRFEEVWTTQQK
MRMQQQGAMGHPQAMGQATPTKMMPGGQMPPQMMQPVAQSQLQQGLQPGQVQSPVKPPGA
QHPNGFPAGQPVPGQQSMLASQGHVRNNLSRTMSTPTAEGFPMPSPAQSKAGTESLPGST
HPESHGIPEQDVVLKISTPFHTNPEEYVPCSQKLTTYGGHELNALWKIGEELQRSKIDVP
SPLELGNVDIHALTKSIQSGIHGEVRVALDTLAILTHKDHHWVAPNHPFPVPQIDLRHCE
ELVEALIECAEEQLDLLVENSEETSDEITVPSYEDIVRNCKIEKFGLQNVTMLGTSDHDL
NRAVDRLICITTILRNFSCHEENHGPLADETVVKFICVVIRYLGTREMLMRTYNDTLDLM
KDLVTLLSNIAPAIEIPGREQAFCLLQFLLAFVPQPGPTWSDGRLFFPSYEPALHPYLPH
AVDCLAKLLARDEPNRTYYKTIFAAEPALSTDPPCELLTRTFALAIAPIPDHTRDHRHPM
PSLVDVRKPILMQGLLAADIMAGLAPGADSGVTRAWLASGDGFAQNLFLLTRQLSAQFET
GTIVQTRPPPGSRGVPSQPTVKRDMDLLYIIGLAISMLRKLCEKARDPSDPALGGIPPNV
IPPKESVLGALQMQAQEWGKPGLLADLLALESMAEEVVSV |
NT seq |
3723 nt +upstreamnt +downstreamnt
atgaactcctcttggatcagcgactccgccgcagtcccctccgcagtccccaatcacaat
ggcaacggcttcccccagctcagcgatccatctgctgtcgccgccggcaacatgatggac
ccgtccgctttcatggccaacccagcccagttcaacgcgcagttcgcgaacccgcaacag
atcgtcatgcagcccaacgggcccggtcctggtgccggtcctagtgctcccggcgctcct
ggaggccctgctggccccgcagggcccatgcgaaatgcgtcaccctcgttcccgaacccc
atgtaccagacgaactcggtcgtgccgtcgaagcggccccgcccgcgagaggatggcatg
gcccagtcgccgcgcccggcacctggcatgctaccgacttcgcgcgcagagacaccgcag
cagtccggctttcagggcttccagcagccgcccataactcagccgccgtctactcaacca
tctccataccctcatctccagaccaatggctcgacgaatgcgacaccctctcccatcatg
gcgaaccagatgcgtcctggtagcgttccccagcgcgtcgcatcctcgtctccccatcca
ttctctcccgccgcgcagcaatttccccagaccccatcgatgccatcggaacatggcggt
acgccgcagccgttcatgcaacagaacgcattccagcaaaacttcaacccgcaattcgcg
cccggtcagtctcctgcgcgtccttctccgactccaaacccgatcgctggccagatgatg
ccacaacagatgggccaggtgccagggcaaatgccaggtcaaatgcctggccagatggca
ggtcagatacctggccaaatggccggtcaaatgcctggtcaaatgcctggtcaaatgcct
ggtcaaatgcctggtcaaatgcctggccaaatgccaggacagatgccaggccagatgggc
cagttgccgcaacaaatgcagatggcaggtcaaatacctggacagattcccggccagatg
cccggccagctaccggggcagatgatgcccggacagttgcctggtcagatgccggggcaa
cttcctggccaggtacccggacagatcccaggacagttacccggacagatgccgggccag
atgcctggacagatgccagtccagcttcccgggcagatgccaggtcaaatgccgggtcag
atggttggtcaggtgccgaacattatgctccagcagcaattggctcaggctcggaatccg
ttggagcagcagaagattttgtaccaaatgcagttgcagcagcagcagctgcagcgagct
agtatccagatgcaacagatggctgcaggccagaacatgatgcaagcgcagccaggcccg
aaccaggcacaagcgcaagctcgcaacatgatggccgccgctccgagacccggcatgccg
aatggccaaatcccgccaggcgctatgaggccgcaacctggcatggctcctcagcctctg
agagcacctccgccggatcaattcatgaaacatctgacgactttcatgagctctaaggtt
ctcccgttcgagatgaatccggtcattgaaggtcgccagatttccctctacaacctattt
gctatcgtttatacaaaggctggcggttatcgcagtgtgacgcagaacaatgcctgggtt
caagtggctcaggcaatgggcttccagccttcgcagctgccgtccgcggcccaacagctc
agagcagcatacgagaggaatctggtcaggtttgaggaggtctggaccacgcagcagaag
atgcgcatgcagcaacaaggagccatgggacatccgcaagctatggggcaagctacacca
accaagatgatgcctggcgggcaaatgccgccacagatgatgcagcctgtcgcccaatcg
caactccagcaaggactccagccaggtcaagttcagtcgcctgtaaagccgccgggtgct
cagcatcccaatggtttcccagccggtcagcctgtgccaggccaacagtcgatgcttgcc
agccaaggacacgtgcgcaacaacttatcgcggactatgtcaacgcctactgccgagggg
ttccccatgccatctccagcacagagcaaggcagggaccgaatcactgcctggatcaacg
catcctgaaagccatggtatacctgaacaggacgttgtgttgaagatatccacgccgttt
cacaccaatccggaggaatatgttccctgctctcagaagttgacgacgtatggcggccac
gaactcaacgctttgtggaagatcggcgaggagctacagaggtcaaagatcgatgttccg
tcgccgcttgagctgggcaatgtcgatatccacgcccttaccaagagcatccagagtggt
atccacggcgaagtgcgcgttgctctcgacacactggccatccttacccacaaagatcac
cactgggtcgcaccgaaccacccattccccgttcctcagatcgacttacggcattgcgaa
gagctggtcgaggccttaatagaatgtgctgaggagcagctcgacctgcttgtcgagaac
tcggaagagacgtcagacgagatcacggtcccgtcttacgaggacattgtgcgcaattgc
aagatcgagaagttcggcttacaaaacgtcacgatgctcggcaccagcgaccacgatctc
aaccgggccgttgatcggcttatctgcatcacgactatccttcgtaacttctcgtgccac
gaggagaatcatgggccacttgccgacgagactgttgttaagttcatttgcgtcgtcatt
cggtacctgggcacccgtgagatgcttatgcgtacatacaacgacactttggatctcatg
aaggacctggttactcttctatcaaacatcgcccctgcaatcgagattcccggtcgggag
caggctttctgcttgcttcagttccttcttgccttcgtcccacagcccggcccaacttgg
tcagatggccggcttttcttcccttcttacgagcccgccttgcatccttaccttcctcat
gcagtcgattgccttgccaaacttcttgcccgcgacgagccgaacaggacatactacaag
accatattcgccgccgagcctgccctttccacagatcctccctgcgagctcctcactcgg
acattcgcccttgctatcgcccctatcccagaccatactcgtgaccatcgccatccgatg
cccagtttggtcgatgttcgcaagccaatccttatgcaaggcttgctcgcagccgatatc
atggccggtctggcgcccggcgccgacagcggtgttactcgggcatggcttgcctcaggc
gatggcttcgcccaaaatctgttcctgctaaccagacagctcagtgcgcaattcgaaacg
ggcacgatagtccaaactcggcctcctcccgggtcaagaggcgtcccttcccagcctact
gtcaagagggatatggatttgctgtatatcattggtctggcgattagcatgctcaggaag
ctttgcgaaaaggccagggatccctcagatccggctttgggcggcattccgccgaacgtc
atcccgccgaaggagagtgtcctcggtgccctgcagatgcaggctcaggaatggggtaaa
ccaggtttgctggcggatttgttggctttggagagcatggcggaagaagtggtttccgtt
tga |