KEGG   Thermochaetoides thermophila: CTHT_0020120
Entry
CTHT_0020120      CDS       T03100                                 
Name
(RefSeq) hypothetical protein
  KO
K20184  vacuolar protein sorting-associated protein 41
Organism
cthr  Thermochaetoides thermophila
Pathway
cthr04138  Autophagy - yeast
cthr04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:cthr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04138 Autophagy - yeast
    CTHT_0020120
   04148 Efferocytosis
    CTHT_0020120
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cthr04131]
    CTHT_0020120
Membrane trafficking [BR:cthr04131]
 Endosome - Lysosome transport
  Tethering complex
   Hops complex
    CTHT_0020120
SSDB
Motif
Pfam: TPR_Vps41 Beta-prop_Vps41 Clathrin Vps39_1 zf-RING_Vps41 zf_RING_Vps8 zf-RING_11 BUD22 Na_trans_assoc zf-RING_5 His_Phos_1 CENP-B_dimeris zf-RING_2 zf-RING_UBOX
Other DBs
NCBI-GeneID: 18256050
NCBI-ProteinID: XP_006692492
UniProt: G0S390
LinkDB
Position
Unknown
AA seq 1358 aa
MTDSSPPPGDNDAKHNNDALALPPGPSSETAADESSAMTQAQDEQGASEPQPTTAAQLGM
AGDRSQGEDIHGEGDDEAEDDEDDEEEEEEEEEEEEEEEEEEPKLKYARLTQHLGGVYRN
GDATSAFLVASDKMVRYLTSHVLQVPSFQPLRVYHAHSASVSSISISPYPPPLPAPGPGL
IRSPTSPLRTSTSTADTQTSSAARRPRELPPVPNTPSNNIYIATSSIDGNICVQSLVDVR
DVSLRNFARPVQAVALSPEYKHDRMYLSGGLAGQLILTVGPPVGRSTATTTGAAAQAAGW
LGSMVGVGTGKDTVLHSGEGTITTIKWSLSGKYVVWLNEHGIKIMRTKLHLEAADADDAW
KRIGHIDRPQTEEWDTMASVWKGRVEWIDEQAIEQDEPSLERRDSVLSPAAESLKQQQLK
ATKKIERLLVGWGGTIWIIHVHPGGIGVGKNAGERSAGRAEIVKILRMDCIISGISLYTQ
NLLLVLAYCLPEEDDESTMEENTPRKPSGGIPRKLNNQPPELRLIDLTSQSEVDKDGLCI
SRFERLSAHDYHLGVLHAQTIAAAQSSRGALETLVGLGTDALSMALNPMSLFSSAASIRS
KDSDSGSKIAPPSRQRRSFSVHPHLEKPGIKIFIHSPYDCVLATKRDLSDHLTWLLEHQK
YQEAWELVDHHPEIVTPSPAESGTPTTPTPQQTTQSSDDFYDDTASIADLKGFHSPAERE
KRRIGDLWVQELVKAENWVRAGQVCGQVVGTPDKWEKWVKTFADAGKLDDIVEHIPSERT
QPPIPGSVYELCLGHYLQSSKPRFRGLLQRWSPDLFDVSAVTASLEDQLRFRDVREDSIE
DGEVGRDWKIVVESLAKLHEASGRNRDALRCYVKLHDADNAMRLIRDRHLADAVTDDIPS
FITLRVPPGRAGKMSRQELEQATSEAITLLVDNAQHGLVKPDVVISQLQARKMDLYTFFY
LRGLWRGDGIHHHGEGTQARLVSESQSLVDQFADLAVHLFAMYDQGLLNSFLRTSTAYAF
EKAAQECESHNYIPELVYLYSKTGQTKRALYLIIDRLGDVSRAIAFAKEQNDPDLWEDLL
SYSMDKPRFIRALLEQVTVTVGSATSTAAVNPVALVRRIPEGLEIDGLREGLLHIVRDHE
IMWSICEGAAKVLRSEVAEAQARLRAGQRRPVKFDMPSAKERAAVVANGHAKGPEPKATS
QTPANGAANSDPGPEPFLLPVKKSAIKSGAAKKCTPGHCAVCLSPFIEWETHTLVGFACG
HVFHLPHLLAKLYPNEREEDWVAQGLLGQVLPAAGAGFGFEDEEDEDGFGLGGHRATLMA
LGAGRSVGAKVTHARLLRERIRGGCPVCGEGQSTDGGR
NT seq 4077 nt   +upstreamnt  +downstreamnt
atgaccgacagctcgccaccacccggcgacaacgacgcgaagcacaacaacgatgctctc
gccctgccgccaggtcccagctccgaaaccgctgctgatgagagttcagccatgacgcag
gcgcaggacgagcaaggtgcgagcgaacctcagccgacgactgcagcgcagttggggatg
gctggtgaccgaagccagggggaagatatccatggagagggcgacgacgaggccgaagat
gacgaggatgacgaagaagaagaagaggaagaagaagaggaagaggaagaggaagaggag
gaagagccaaagctcaagtatgcccgtctgacacagcatctgggcggggtgtaccgcaac
ggcgatgcgacgagcgcctttctggttgccagcgacaagatggttcgatacctcacttcg
cacgtcctccaagttcccagcttccagccgctgcgtgtgtaccacgcccactccgcctcc
gtcagctccatctccatctctccttatcctcctccactgccagcccctgggccgggactc
atccggtccccgaccagcccactgcgcacgagtacctcaaccgcagatacccagacgtcc
tcggctgcaaggcgaccccgcgagcttcctccagttccaaatacaccttcaaataacatc
tacatcgccacatcttccatcgatggtaacatctgcgtccaatcgcttgttgatgtgcgc
gatgtctcactacgcaactttgcccgccccgtccaggctgtggcactatcgccggagtac
aagcacgacaggatgtatctatctggcggtctagccggccagctcatcctgactgtcggc
cctcccgttggtcgcagcacggcaaccacaactggcgctgcggcccaggcggccggctgg
ttgggcagcatggtcggtgttggcactggcaaggacactgtgctgcattccggcgagggc
accatcactactatcaaatggtcgttgtcaggcaagtatgtggtgtggctgaatgagcat
ggcattaaaatcatgcgcacgaagcttcatctcgaagcggccgatgccgatgatgcctgg
aagcgaataggccatatcgatcgcccgcagactgaggagtgggatactatggcgagcgtg
tggaagggtcgcgttgaatggatcgatgagcaggctatcgaacaggacgagcctagcctc
gaaaggcgtgactcagtgttgtcgccagctgcagaaagccttaagcagcagcagttgaag
gcaacgaagaagatcgagaggttgctcgtcggttggggtgggactatctggatcatccat
gtccatcccggtggcatcggtgtcggcaagaatgctggtgagcggtccgccggtcgggcc
gagattgtgaagatactacgcatggattgcatcatttccggcatttcgttgtatacccaa
aacctgttgctagttcttgcttactgcttacctgaggaagacgatgagtcgaccatggag
gagaacactccccggaaaccgtcgggcggcattccccgtaaactcaacaaccaacctcca
gagctccggttgattgacctgacctcccagagtgaggtcgacaaagacggcctttgcatt
agtcgcttcgagcggctctctgcccacgattatcacctgggcgttctacacgcccaaacc
atcgcagctgcccagtcctctcgcggtgcgctcgagactttagtcgggctggggaccgat
gcactcagcatggcactcaatccgatgtcgctgttcagttcagcagccagcatccgcagc
aaggacagcgactctgggtcgaagattgccccgccttcgcgtcagagacgctcattttca
gtacacccacacctcgagaagcctggtatcaagatctttattcatagtccgtatgactgt
gtgttggctaccaagcgcgacctttctgatcaccttacctggctcctggaacaccagaag
taccaggaagcttgggagctggtcgaccaccatcccgagatcgtcactccttcgcctgcg
gagagcgggactccgactacccccacaccgcaacagactacccagagcagtgatgacttc
tatgacgacacggcctccatagcagacctcaagggtttccactcgccagctgaacgcgag
aagcgtcgcatcggcgacctttgggtgcaggaactcgtcaaagcagaaaactgggtccgc
gcaggccaggtatgtggccaggttgtgggcacccccgacaagtgggagaagtgggttaaa
acctttgccgacgctggcaagcttgacgatatcgtggagcatatcccctcggagcggaca
cagcccccgattccgggaagtgtctacgagctgtgtctgggccattacctgcagagtagc
aaacccagatttaggggcctgctgcagcgttggtctccagatttgttcgatgttagtgcc
gtgacggcctcgctggaggatcagcttcgcttccgtgacgtccgggaggacagtattgag
gacggagaagtcggaagggattggaaaattgtggttgagagtcttgcgaagcttcacgag
gcaagcggcaggaacagggatgcgctgcggtgctatgttaagctgcatgatgcggacaat
gcaatgcggcttatccgcgataggcatcttgctgatgctgtgaccgatgatataccgagc
tttatcaccctgcgtgtgccccctggccgggcaggaaagatgagccggcaggagttggag
caggcgacctctgaggcgattaccttgcttgtggataacgcgcagcatggattggtcaag
ccggacgttgttattagccagctgcaggcgaggaagatggatttgtatacattcttctac
ctgagagggttgtggagaggtgatggcatccatcatcatggggagggaacccaggctagg
ctggtgagcgagagtcagagtttggtggaccagttcgccgatttagccgtgcatctgttt
gcgatgtatgaccaggggctgttgaatagcttcttgaggacgtcgacggcatatgccttc
gaaaaggctgcccaagaatgcgagtcccacaactatatccccgagctcgtctacctatac
tcgaaaaccggtcagactaagcgggccctctacctcatcatcgaccgactgggcgatgtc
tcgcgtgccattgccttcgccaaggaacagaacgaccctgacctgtgggaggacctgctg
tcgtacagcatggacaagcctcggtttatccgtgccttgctggagcaggtgacagtcact
gtcggcagcgcgacatcgacggcagcagttaaccctgtcgcactggtcagaaggatacct
gagggcttggaaatcgatggtcttcgggagggcttgttacacattgtgcgcgaccatgaa
atcatgtggagcatatgcgaaggcgctgccaaagtcctgcgctcagaggtcgccgaagct
caagctcgtctccgagccggccagcgccgccccgtcaagttcgacatgccttctgccaaa
gaacgcgccgccgtcgtcgcaaacggtcacgccaaaggccccgagccgaaagccacttca
caaacccctgccaacggggctgctaactccgatcccggtcctgaacctttcctcctcccg
gtcaagaaatcagctatcaagtctggcgcggcaaagaaatgcacccctggccactgtgct
gtctgcctctcgcccttcattgaatgggaaacccacaccttggttggctttgcctgtgga
catgtcttccatttgccccatctcctagccaaactctaccccaatgagagggaggaggac
tgggtggcgcaggggttgttaggtcaagtgttacccgctgctggggccggctttggtttt
gaggatgaagaagatgaggatgggtttgggctgggggggcatagagctacgttgatggct
ctaggggctgggcggtccgttggggcgaaggttacacatgcgaggttgttgagggagagg
atacggggaggatgtcctgtctgtggggaagggcaatcgactgatgggggcaggtaa

DBGET integrated database retrieval system