Thermochaetoides thermophila: CTHT_0021520
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Entry
CTHT_0021520 CDS
T03100
Name
(RefSeq) hypothetical protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cthr
Thermochaetoides thermophila
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cthr03016
]
CTHT_0021520
Enzymes [BR:
cthr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CTHT_0021520
Transfer RNA biogenesis [BR:
cthr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CTHT_0021520
Prokaryotic type
CTHT_0021520
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
18256190
NCBI-ProteinID:
XP_006692622
UniProt:
G0S3J9
LinkDB
All DBs
Position
Unknown
AA seq
658 aa
AA seq
DB search
MADNENIPQVAPPSGPTPEPKPAAVAEAAQSTENTPKENNHDSNRSNTTPSSSKPAGGST
RGDDKPHKRKHTGFGAAKGEVPDKREQVAQNREAKRRRIIEGENGGHSYMSITFPPEEIA
AEQRRPKRKVAVLIGYAGTGYHGIQINHKERTIEGDLFAAFVKAGAISKVNADDPKKSSL
VRCARTDKGVHAAGNVLSLKLIVEDPDIVEKINSHLPDQIRVWGIQRTSNGFSCYQACDS
RWYEYLMPSYSLLPPHPKSFLGKKIIESAKEKGVYDEYMSRLDDVKDFWEEVEKNDIKPI
LDRLDPSIKPEVLRKLYASVDQVLTDETEPTQDNEGMAQDVEMKDASEQSTAAQDGKPEA
AKADSDTKMEGTSASDKLKDTKMEDAKAESKSKQDSAFTVQKSKDSKSKSDKDKELTPVE
LALREIKAAYVAAKRRYRVTPVRIQRLQEALNQYLGTRNFHNYTVMKAFKDASAKRHIKS
FQVNPNPIQIRDTEWLSLKVHGQSFMMHQIRKMVAMAVMVVRCGAPLDIINQSYGPRRIS
IPKAPGLGLMLERPMFTEYNKKAVTIGREPIDFAKYEDKIKAFKDEHIYRRMFELEEKEN
SFHLFFNQVDNYRTDYFLWVTAGGLEASHERSERTERVPKALQAELGDDADGVEERGD
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaacgagaacatccctcaggtcgctcccccaagcgggcctactccagagcca
aagccggcagccgttgccgaggctgctcaatcgactgagaacactcccaaggagaacaat
cacgacagcaacagaagcaacaccactccttccagctccaagcctgccggcggaagcacc
cgcggagacgacaaaccccacaagcgcaagcacacaggtttcggcgcggcgaaaggagag
gtccccgacaagcgtgagcaggtcgcccagaaccgcgaggccaagcgtcgccgcataatc
gaaggcgaaaatggcggtcacagctacatgagcatcactttcccccctgaggagatcgct
gccgaacagcgccggccgaagcgcaaggtcgccgttctcattggctacgcgggcacaggc
taccacggcatccagatcaaccacaaggagcgcacgatcgagggtgatctttttgcggcc
tttgttaaggctggtgccatctcgaaggtcaatgccgatgatcctaagaagtcgagtctt
gtacgttgcgcgcgtaccgataagggcgtgcacgccgccggcaatgtcctctcgctgaag
ctgatcgtggaggaccctgatattgtcgagaaaatcaactcccatctgcccgaccagatt
cgcgtctggggtatccagcgcacgagcaatggcttcagctgctaccaggcctgtgactcc
cgctggtatgagtacctgatgcccagctactcgctgctgccgcctcacccaaagagcttc
ctgggcaagaaaatcatcgagtcggccaaggaaaagggcgtctacgatgaatacatgtcc
cggttggacgatgtgaaggatttctgggaggaggtcgagaaaaatgacattaagccgatt
ctcgataggctcgatccctcgataaagcccgaggtcctgcggaagctgtatgcttccgtc
gaccaagtgttgaccgacgagacggagcctacgcaggacaatgagggcatggcgcaggat
gtcgagatgaaggatgcctcggagcaatcgactgctgcccaagatggcaagccggaagct
gccaaagctgactcggacactaagatggagggtaccagtgccagcgataagttgaaggat
accaagatggaggatgcgaaagcggagtccaagtccaagcaggattccgccttcaccgtg
cagaagtcaaaggactccaagtccaagtctgacaaggacaaggaactcacgcctgtcgag
ctagccctccgcgagatcaaagccgcctacgtcgcagccaagcggcggtaccgcgtcacc
cccgtgcgcatccagcgcctgcaggaggccctcaaccagtacctgggcacacgtaacttc
cacaactacaccgtcatgaaggcgttcaaggacgcttccgccaagcgccatatcaaatcg
ttccaggtcaacccaaacccgatccagattcgtgataccgagtggctctcgctcaaggtg
catggtcagagctttatgatgcatcagattcgaaagatggtcgccatggctgtgatggtt
gtacggtgtggtgcccctctggatattattaaccaaagctatgggccaaggaggatcagt
attcccaaggcccctggcctgggattgatgctggagagaccgatgttcaccgagtacaac
aagaaggctgtgaccattggccgtgagccgattgactttgctaagtatgaggataagatt
aaggcgttcaaggatgagcacatctatcgccggatgtttgagttggaggagaaggagaat
tctttccatctcttcttcaaccaggtcgacaactaccggaccgactactttctttgggtt
actgctggcggcctggaggcatcccacgagcgatcagaaaggaccgagagagtacccaaa
gccctgcaggctgaactgggcgatgatgctgatggcgttgaggagaggggcgattga
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