Thermochaetoides thermophila: CTHT_0023040
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Entry
CTHT_0023040 CDS
T03100
Name
(RefSeq) hypothetical protein
KO
K15176
RNA polymerase-associated protein CTR9
Organism
cthr
Thermochaetoides thermophila
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cthr03021
]
CTHT_0023040
Transcription machinery [BR:
cthr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
CTHT_0023040
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_8
TPR_12
TPR_16
TPR_19
TPR_11
TPR_CcmH_CycH
TPR_6
TPR_14
TPR_7
TPR_17
ARM_TT21_2nd
TPR_10
TPR_Slam
Period_C
Motif
Other DBs
NCBI-GeneID:
18256342
NCBI-ProteinID:
XP_006692768
UniProt:
G0S4P3
LinkDB
All DBs
Position
Unknown
AA seq
1289 aa
AA seq
DB search
MASSQTLSGANGVPNGAIAAPKSKRFSDIPQTIDIPVQDQDDEAVEIDLEELADDPTELC
TLFEMEHAARTYWMTVALAYAKQKKIDFAIEMLMRGANALQANPREKLSIITCLCWLYLY
KSREAPRVAPDNVPASEVKTKEHYLQLATQSLNEASRINPAFPPLFLARGVLLLLRASLQ
PPSKGVGPTGVDSQKAEQLCNALKSFEEAIRVSQGKNMLAVMGKARALFSLGRYPESLAA
YQEVLSKMPDMVDPDPRIGIGCCFWQLGYKDDARQAWERCLEINPESKTANILLGLYYLD
ASGHVPTNSPEFIRLYKKAMTEFTQKSFKLDKNSPLACSTFAGYFLSRKQFDTVDSLAHK
AIRYTDVNAVASDGWYLLARKEHYAGNLERAADCYRRADDARGGAERGYLPAKFGLAQLS
VLKGDLGEAKLRLEKIIQQSKNYEAMVLLGTLYAEEVFANQSAAVKEDKSAEAKKAIALL
EGVRSAWKDPKKNLSPDACVLLNLARLYESEQPDKALQCLQQVEQLELSQIPRSEYPPDT
EDEAVIKAAIRKLLPPQLLNNIGCFYSQEGKHTLATEFFQAALDSCARISSQSDSDIDTD
ALLTTISFNLGRSYEYEGQIDAAVETYERLLSRHSDYTDARTRLAYIKLRRNPSNKEGPD
AVAKLYQENPQDLEVRALYGWFLGRVNAKKRPANLAEDPEQRHFKHTLQNYDKHDRYALV
AMGNLHLMAAREMRRETDQDRQKRSATYSRAVEFFDKALQLDPKNAYAAQGIAIALIEDK
KDYTNALQIFIKVRETIQDAHVYVNLGHLYAELKQFTKAIESYEIALSKEGKARDANILS
CLGRTWLNKGRAERNLDAYKTALEYAENTLSVAPEQLHFKFNVAFVQIQIAMLLISFRDS
ERNSFQLEQASEGLEAAIKTLDEIAAAPNPPYPKHDLEQRANMARNTMRKQLERALASQR
EYEARNKEKLQAAMEARQAELRRREEERRRAEEAERERQEKIRREREEILARDRALAEQR
AEEERLRMEAEMTTDTETGEKVMRKSKKRSARARSGEPSRSGRARRRKSTAHRGESGEDG
ANAGDEGAERRRARKRQRLTKKDSKYKSAEIVVDSDESDDGGAGIDEEDPLEQAERRLAE
AAAERKRERRAAQSGSSRSRSNSVASNRSSRSARSTRSRSSIFGSNDDDEEDRPAKRQIR
RRRSSAEEEEEEEDDKMDVDQEVSAVPAPVADNDDEEEETIARRPQKRAARRGRILDESD
EEEEAAGNAPTPGAAEEKADTSMVDADED
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtctcagaccctttctggcgccaatggcgttcctaacggcgctatcgctgct
ccaaagagcaaacgcttttccgacatcccccagaccatcgacattcccgtgcaggaccaa
gatgacgaggctgtcgaaatcgacctcgaggagctcgccgatgacccgaccgagctctgc
actctgttcgagatggagcacgccgcccgcacatactggatgacagtcgcattggcgtat
gcgaagcagaaaaagatcgactttgccatcgagatgctcatgcgcggcgccaacgccctg
caggcgaacccgcgcgagaagctcagcatcatcacctgcctatgctggctgtacctctat
aagagccgcgaagcgccccgcgtcgcccctgataatgtgccggcatccgaggtcaagacg
aaggagcactatctccagcttgccacccagagcctgaacgaggcctcgcgcatcaatccc
gctttcccccccctcttcctagcccgcggtgtcctgctgctgctgcgcgcgtcactgcag
ccgccctcgaagggtgtaggccccaccggtgtcgattcgcagaaggctgagcagctgtgc
aatgcgctgaagtcattcgaggaggccatccgagtctctcagggcaagaatatgctggca
gtcatgggcaaggcccgtgccctcttctccttgggtcgctatcccgagtcgctggccgcc
taccaggaggttctgtccaagatgcccgacatggttgacccggatccgcgcattggcatc
ggctgctgcttctggcagcttggctacaaggacgacgctaggcaggcctgggagcgctgc
ctcgagatcaaccccgagtcgaagaccgccaacattctgctcgggctgtactacctcgat
gccagcggccacgtgcccaccaacagtcccgagtttattcgcctctacaagaaggccatg
accgagttcacccagaagtcctttaagcttgacaagaactctccccttgcctgctcgact
ttcgccggttacttcttgtctcgcaagcagttcgacactgtcgattccctggctcataaa
gccatccgatacaccgatgtcaacgccgtcgctagcgacggctggtacctgctcgcccgc
aaggagcactatgccggaaacctcgagcgcgctgctgattgctaccgtcgcgccgacgat
gcccggggcggtgccgagcgcggctatctgcctgcgaagtttggtcttgctcagctctct
gtgttgaagggcgacctcggcgaagcaaagctccgtcttgagaagatcatccagcagtct
aagaactacgaggctatggtcctgctcggtaccctgtacgccgaggaggtttttgccaac
cagtctgctgctgtcaaagaagacaagagtgccgaagccaagaaggctattgcccttctt
gaaggtgttcgctccgcctggaaggatcccaaaaagaacctgtcgcccgacgcttgcgtc
ctgctcaaccttgcccgtctgtatgagagtgagcagccagacaaggcgctgcagtgcctg
cagcaggttgagcagctcgagttgtctcagatccccagatctgagtacccgcctgacaca
gaggatgaagccgttatcaaggcggccatccgcaagctgcttcctcctcagctgctcaac
aacatcggttgcttctattctcaggagggcaagcacacgctggccaccgagttcttccag
gccgcccttgactcgtgtgcgcgcatcagcagccagagcgatagtgacatcgacaccgat
gcgctgcttacgaccatttctttcaacctgggccgcagctatgaatacgaaggccagatc
gatgccgctgtcgagacctacgagcggctgctgagccggcacagcgactacacggacgct
cgcacacgtctggcctacatcaaactgcgccgcaacccaagcaacaaggagggacccgac
gccgtggccaagctgtaccaggagaatccgcaggacctcgaggttcgcgcactgtatggc
tggttcttgggcagggttaacgccaagaagcggccagccaacctggccgaggacccggag
cagcgtcacttcaagcacacgctgcagaattacgacaagcacgaccggtacgcgctggtg
gccatgggtaacctccatttgatggcggcgcgcgagatgcgtcgcgagacggaccaggac
cgtcagaaacgaagcgcgacctacagccgggcggtcgaattcttcgacaaggcccttcaa
ctcgacccgaagaacgcgtacgcggcgcagggaatcgcgatcgcgctgatcgaggataag
aaggattacaccaacgccctgcagatctttatcaaggtccgcgagaccatccaggatgca
cacgtctatgtcaacctgggccacctctacgccgagctcaagcagtttaccaaagccatc
gaaagctatgagatcgccctgagcaaggaaggcaaagctcgcgatgccaacattctctca
tgtcttggccgtacctggctcaacaagggccgtgccgaacgcaacctggacgcttacaag
accgctctcgaatacgccgaaaacactctatctgtcgcccctgaacaactccacttcaag
ttcaacgtcgccttcgtccagattcagatcgcgatgttgctcatttcattccgcgacagc
gagcgcaactccttccagctcgaacaagcaagcgaaggcctcgaggccgctatcaagacc
ctcgacgagatcgcggccgcgcccaaccccccttacccgaagcacgacctcgagcagcgc
gccaacatggcccgcaacaccatgcgcaagcagctcgagcgcgctctggccagccagcgt
gagtatgaggcccgcaacaaggagaagctccaggccgccatggaggcccgccaggccgag
ctgcgccgtcgcgaggaggagcgccgtcgcgccgaggaggctgagcgcgagcgccaggag
aagattcgtcgcgaacgcgaggagatcttggctcgcgatcgcgccctggctgagcagcgt
gccgaggaagagaggctgcgcatggaggccgagatgacgaccgacaccgagaccggggag
aaggtaatgcgcaagagcaaaaaacgtagcgcccgtgctcgctctggtgagccttctcgc
tcgggccgtgcccgtaggaggaaatcgactgcccaccgcggtgagtctggtgaggatggt
gccaatgctggcgacgagggcgccgagcgtcgtcgtgcaaggaagcgccagcgtcttacc
aagaaggattccaagtacaagagcgcagagatcgtcgtcgacagcgacgagagcgatgat
ggtggcgctggtatcgatgaagaggatccgcttgagcaggccgagcgtcgtctcgctgag
gcggccgccgagcgcaagcgtgaacgtcgcgccgcccagagcggcagcagccgcagtcgc
agtaatagtgtcgctagcaaccgcagctcgcgcagcgcccgcagtacccggtcgcggtcg
tccatatttggcagcaatgatgacgatgaggaggaccgtccggccaagaggcagattcgt
cgcaggaggtcgtcggctgaggaggaggaagaggaggaagatgataagatggatgttgat
caggaggtgtcggctgtccctgcgcctgttgctgacaacgatgacgaggaggaagagact
attgccagacgcccgcagaagagggctgctagacgtggcagaatcttggatgagagtgat
gaagaagaggaagcggctggaaatgcgccgacgcctggggcggcggaggagaaggctgat
acgagtatggttgatgcggatgaggactga
DBGET
integrated database retrieval system
