Thermochaetoides thermophila: CTHT_0023390
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Entry
CTHT_0023390 CDS
T03100
Name
(RefSeq) hypothetical protein
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
cthr
Thermochaetoides thermophila
Pathway
cthr03082
ATP-dependent chromatin remodeling
cthr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CTHT_0023390
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
CTHT_0023390
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cthr01009
]
CTHT_0023390
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cthr03021
]
CTHT_0023390
03036 Chromosome and associated proteins [BR:
cthr03036
]
CTHT_0023390
Protein phosphatases and associated proteins [BR:
cthr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
CTHT_0023390
Transcription machinery [BR:
cthr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
CTHT_0023390
SWI/SNF complex
CTHT_0023390
Chromosome and associated proteins [BR:
cthr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
CTHT_0023390
PBAF complex
CTHT_0023390
SWI/SNF complex
CTHT_0023390
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
VPS13_N
Med3
TFIIA
HAM1_N
TERB2
TH_ACT
Spt20_SEP
PAT1
eIF-3_zeta
Motif
Other DBs
NCBI-GeneID:
18256377
NCBI-ProteinID:
XP_006692803
UniProt:
G0S4S8
LinkDB
All DBs
Position
Unknown
AA seq
777 aa
AA seq
DB search
MAAPQVSAASAAGGDVDGSTSSSIAPATAAPTSTSSAANAPSAVPGGASSKSTTPQHDTP
LAPPVRDKESFNRMLVERFQTRDWLHSAAIKEAQMRAERDTKDMLARASDYRTYKEFYAN
YPSRLYGEGYRGYGNGFTENGSTTKIIYPSQKPRPGRRVTPPLKFSKKDMKKQAEQHEEL
VPVRIDVDWDRIKLRDTFTFNLHERLVSVEHFASQFVEDMGLNPMGQDKPVYDQVVQQMH
EQLNDFYPFCYTEEDALDPELPYSAYKNDEMRILIKLNITIGAHTLVDQFEWDINNPLNS
PEEFAASMTRDLSLSGEFTTAIAHCIREQAQLFTRSLYSVGHPFDGRPIEDPDLVAAFLP
SPLPSVFRPQQQAKDYAPYLYENTEAELERTETMFSREQRRQKRSINRRGGPSLPDLKER
QRTIRTSIVSSVLPGAALTIEESRLFKRTIGSSGVTGRGKRTARDGDISDSEDDDDSAPD
SPAMQPQGTRTRGLRGAAATAAQRMANLGRSETPEAVIHHHETRTSRRLGREATREQTEE
PLQHIVTLKVSPSKLRKLMRDLRMRPINSSSATPTASHQRAPSTATPAPMGPPSTPSTSN
QQQQQQQQQQQQQQQQQQQQQQQQQQQQNQSKPNSSSNLQNQIGRVPAPPPSGPNGNAPN
QPPPPPPEWLVNALNELSKSYPNDSFEAIMRYCAIDTETNTALQLPLKGWPDEPIPPNVQ
FYWLPRIRCRDCPGKSYTAGPDTTVQNFEVHLTWKGHREKVAARLAKQQAGGQSASA
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggccgctccgcaggtgtcggcagcgtcggccgctggcggcgacgtcgatggctcaaca
tcatcttcgattgcgcccgcgactgctgcgccgacgtcgacttcctccgccgcgaacgcg
ccctcagctgttcctggcggcgcgtcctccaagtccaccaccccgcaacatgacacccct
ctcgctcctcctgttcgcgataaggagtcctttaacaggatgttggtcgaacgcttccag
acacgcgattggcttcactctgctgccatcaaggaagcccagatgcgcgccgaaagggac
accaaagacatgctcgcccgcgccagcgactaccgcacctacaaagagttttacgccaac
tatccatctcggctctacggcgagggctatcgcggctatggcaatggcttcactgaaaac
ggttctaccaccaaaatcatctacccgtcccagaagccgcgtccgggtcggagagtaacg
ccgcctttgaagttcagtaagaaggacatgaagaagcaggcagaacagcacgaggagcta
gttcctgtccggattgatgtcgattgggatcggataaaactgcgcgacacatttaccttc
aacctgcacgagcgcctggtttctgtcgagcacttcgcttcacagtttgtcgaggatatg
ggcctcaaccccatgggccaggacaagcccgtttatgaccaagtggtgcagcaaatgcac
gagcagctcaacgacttttatcccttttgctacacggaagaagatgctcttgaccctgaa
cttccctactccgcttataagaacgacgagatgcgcatcttgatcaagctcaacataacc
atcggcgcccacacacttgtcgatcagttcgaatgggacatcaacaaccccctcaattct
ccagaggaattcgcggcatccatgacccgtgatctttccctttctggcgagttcacgaca
gcaattgcccactgcattcgagaacaagcccagcttttcacccgtagtctctacagcgtc
ggtcatcccttcgacggtcgccccatcgaagatcccgatctcgtcgccgccttcctgccg
tctcccctgccttctgttttcagacctcagcaacaggccaaagactatgctccgtatttg
tacgagaacacagaagccgagctggagagaaccgaaaccatgttctcccgcgaacagagg
agacagaagcggtcaattaaccgtcgtggcggtccttcgttgccggatctgaaggagagg
cagagaaccattcggacatctatcgtgtcctcggttctgccaggcgctgccttaaccatc
gaagagagtcgcctgtttaagcgcacaataggcagcagtggtgtcactggcagaggaaag
aggacggctcgcgatggagatatctcggattccgaggacgacgacgactccgctcccgac
tctccggccatgcagccccaagggacgaggaccagaggccttcgcggcgctgctgctacc
gccgctcagcgtatggctaatctgggccgctccgagactccagaggcggtcattcaccac
cacgaaactaggacatcgcgccgtcttggccgcgaagctactcgcgaacagacagaagag
ccgttacagcatatcgtgaccttgaaggttagcccatcgaagcttcggaagcttatgcgc
gatctcaggatgaggccaattaattcttcgtctgctacgccgaccgcttctcaccaacga
gccccgagtacagcaacaccagcccctatgggccctccgtcaacaccatctacatccaac
caacaacagcaacagcagcagcaacagcaacagcaacaacaacaacaacaacaacaacaa
caacagcagcagcagcagcagcagaaccagtccaagccgaattcctcctcgaatcttcag
aaccaaataggccgcgttcctgctccaccaccctctggccccaatggcaacgcccccaat
caaccaccgcccccgcccccagaatggctagtcaatgcactcaacgagctctccaagtcc
tacccgaatgactccttcgaggccatcatgcgctactgcgccatcgacaccgagaccaat
accgccctgcagctgccgctcaagggctggcccgacgagcctatcccgcctaacgtccag
ttctattggcttcctcgcattcgctgccgcgactgccccggcaaatcgtatactgcgggc
cctgacacgacagttcaaaacttcgaggtgcacttgacttggaagggccacagggagaag
gttgcggcccggttggcgaagcagcaggccggcgggcagagcgcctcagcataa
DBGET
integrated database retrieval system