Thermochaetoides thermophila: CTHT_0023980
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Entry
CTHT_0023980 CDS
T03100
Name
(RefSeq) putative vacuolar protein sorting-associated protein
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
cthr
Thermochaetoides thermophila
Pathway
cthr04138
Autophagy - yeast
cthr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
CTHT_0023980
04138 Autophagy - yeast
CTHT_0023980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cthr04131
]
CTHT_0023980
Membrane trafficking [BR:
cthr04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
CTHT_0023980
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
B12-binding
Motif
Other DBs
NCBI-GeneID:
18256436
NCBI-ProteinID:
XP_006692860
UniProt:
G0S539
Structure
PDB
PDBj
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
MDIVQAAVGYVNRMVTAGGGASGSGAPSAKMKILLLDRDTLPFISTAVSQSTLLNHEVYL
MDRIDNQNREKMRHLRCLCFLRPTLDSVGLLVDELREPKYGEYHLFFSNVVKKSTLERLA
EADDHEVVKVVQELFLDYSVINPDLFSLNMSLPTHRLWSGSPDMWNADSLQRATEGIIAV
LLSLKKRPLIRYQKTSGLARRLAHEVRTFVSKEEQLFDFRRVDTPPILLILDRREDPVTP
LLMQWTYQAMVHHLLGINNGRVDMSSVPDIRPELKEIVLSQDQDPFFKKNMYLNFGDLGS
NIKDYVEQYQSRTKSTHDIESIADMKRFMEEYPEFRKLSGNVSKHVTLVSELSRRVGAEN
LLEVSELEQSIACNDNHSSDLKTLQSHLSNPSIPPQNKLILVALYALRYAKHPSNSLPIL
LDLLTAAAGVPARQVALIPKLLTYHRSLHAAQPGADSSGVESLFETTPGTVVANLFGVGS
SGGRFKGLKGVENVYTQHSPKMEGTLHQLVKGRLRESQFPFVDTTSAGPGASSGSTSGLG
SVTKDKPQDIIVFMIGGATYEEAKLVAGINASVPGVRVVLGGTSVVNAKEFLAEVEDAVD
GWGGLDLSGGIGSGGSGPGSARRR
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggatattgtacaggcagccgtcggctatgtcaaccgtatggtgacggctggcggtggc
gcgtccggttcaggagcgccatcagccaagatgaagatccttctcctggatcgagacacc
ctgcccttcatttcgactgccgtctcacagtcaaccctactgaaccatgaggtttatctt
atggaccgtatcgacaaccagaaccgcgagaagatgcgtcatttgcgttgtttgtgcttt
ttgcggccaactttagactccgttggtctcctggtcgatgagctacgcgagcccaaatac
ggggagtaccatctgttcttcagtaacgttgtcaagaagtcgactctggagaggctggct
gaggcagatgatcatgaggtggtaaaggttgttcaggagctcttcctagactattctgtc
atcaacccagacctgttttcgctcaacatgagcttgccaacccaccggctatggagtggg
agtccggacatgtggaacgcagactcattgcagcgtgcaacggaaggtatcatcgctgtc
ctgttgagcctcaagaagaggccgttgattcgctaccagaagaccagcggcttggccagg
aggttagcccacgaagtgcggacctttgtttccaaggaggaacaattgtttgacttccgc
cgggtcgatacgccccccatcctccttatcctcgaccgtcgcgaggatccagttactcca
ttgctcatgcaatggacctaccaggccatggtgcaccacctgctggggatcaacaacggt
cgtgttgacatgagcagcgtgccggacatccggcctgaacttaaggagattgtcctctca
caagaccaggacccctttttcaagaaaaatatgtacctcaactttggcgacttgggcagc
aacatcaaggattacgtcgagcagtaccaatctcgcaccaagagcacccacgacatcgag
tccatcgccgacatgaagcgtttcatggaggagtatcctgagttccgtaagctgtcgggc
aacgtcagcaagcatgtcaccctggtctctgagctcagtcggcgtgtcggtgctgagaac
ctgctggaggtgagcgagctggagcagagcatcgcttgtaatgataatcattcctctgat
ctcaaaacccttcaatcccacctttccaatccgagcatccccccacagaacaaactcatc
ctggtcgccctctacgccctacgctacgccaaacacccttccaactcattgcccatcctc
cttgacctgctcacggccgcagctggcgtccctgcccgccaggttgcgctgattccaaaa
ctcctgacctaccaccgcagcctgcatgccgcacagcccggcgcagacagcagcggcgtc
gagtcattgtttgagacaacccccggcacggtagtcgctaacctctttggcgtcggttcc
tccggaggtcgtttcaagggcctaaagggcgtcgagaatgtttacacgcagcactcgccg
aagatggagggtacccttcatcaactggtaaagggacgcctacgcgagtcgcagttccca
tttgtggataccacatcagccgggcctggggcgtcttcaggaagcacatctggcctgggg
tcggtgacaaaggataagccgcaggatattattgtttttatgattggtggtgctacatat
gaggaggcgaagttagttgcggggatcaatgcttcggtgccgggggttcgggtcgtgctt
ggagggacgagtgttgtgaatgcgaaagagtttttagcggaggttgaggatgcggtcgac
ggttggggaggattggatttatctggggggatagggagcggtggtagtggtccaggcagt
gctaggagaaggtag
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