Thermochaetoides thermophila: CTHT_0026810
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Entry
CTHT_0026810 CDS
T03100
Name
(RefSeq) hypothetical protein
KO
K14792
rRNA biogenesis protein RRP5
Organism
cthr
Thermochaetoides thermophila
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cthr03009
]
CTHT_0026810
Ribosome biogenesis [BR:
cthr03009
]
Eukaryotic type
90S particles
Other 90S particles
CTHT_0026810
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
OB_RRP5_4th
Spt6_S1
TPR_14
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_19
HAT_Syf1_CNRKL1_C
Suf
TPR_16
TPR_2
TPR_6
TPR_8
TPR_12
ARM_TT21_C
TPR_7
NRDE-2
TPR_1
TPR_NPHP3
TPR_10
PPR
AEP1
DUF7017
Imm9
UTP6_C
ANAPC3
Motif
Other DBs
NCBI-GeneID:
18256719
NCBI-ProteinID:
XP_006693139
UniProt:
G0S6T5
Structure
PDB
PDBj
LinkDB
All DBs
Position
Unknown
AA seq
1796 aa
AA seq
DB search
MGSLKRKEGPDGSSASKSKRAKSGETTKDTKIDSNKDAKQLKTPAVAKPITTPVVTVLKD
EEPLFPRGGGSVLTPLEQKQISIQAKKDVLFEEAKKGGKEDTAARSKKKRKSKIEEPATK
SKDEDSVKIESLNFKRLVKGSLVLGTICGISPLEIAVALPNNLIGHVPITAISESLTQRL
QALQANGEKGDGEESGDENNLDDIDINLFVHLGQYVRAYVVSTIDESVAGKTRRHIELSL
YPAHANSGLSEQDIVLNSTLMASVVSVEDHGFVMDIGISDSQLKGFLPRKQLDPSIPEET
VQPGSVLLCIVTGKAASGKVVQLSTLVDRLGNPKHFPAEATTIDTFLPGTAAEVLVSEVH
THGLVGKVMGHLDVTADIVHSGSGPDGADLVNQYKVGSRVKARVICNFPTANKPKLGISL
LPHVLSLKPKTTTKDGQEVLPTDVLAHSAIIQECRVERVEPGIGLYVNVGVEGVSGFVHI
SRVKDGKIDTLFENSGPYKIGSVHPGRVVGYNSFDGVYLLSLEKSVLEQPFLRIEDIPIG
AVVSGQVEKLVVNTQGFGGLIVKIAEGISGLVPEMHVSDVHLQHPEKKFREGMKVKARVL
STNPARHQVRLTLKKTLVNSDAPAIKSYDELAVGMQAFGTIVAVLQHGAIVQFYGQLRGF
LPVSEMSEAYIHDPKEHFRVGQTVSIYVLSFDPEVARLIVSCKDPSAFGLEKQLALKKLQ
VGDVVSAKVTQKTEDDVFVELIDSSLKAILPVGHLTDKSVNKTQAALKRIHVNQTLTELV
VLEKNEGRRSIILSHKPSLVQAGKEGKLISTVDDARLGEQVPGFVRNITASAAFVQFGSK
LTALLPKSLMPQDWHDKPNFGLHKYQSLLVKITSIDKELGRLVVAIPSAADQESKKPEKP
ADQAVNPLDETVTTMADLTIGKLTKARVRAVKETQLNVEIADNIQGRIDVSQIFDKWEDI
PDPRRPLKRFKPKDIIDVRVLGIHDARNHRFLPITHRSSHAVLELSAKPSDVQAPSLPEP
LSLEKIEVGSTHLAFVNNVASNYLWVNLSPNVRGRISAMEASNDLSKLANLERSFPIGCA
LKVRVLSVDKEKSRVDLSARTPGASHELTWDMIEQGMVLPAKVTKINDRQVIVKLSESVA
GPVHLPDLADDYDEANPLSHSKFEIVRVAVVEVDKSNKKLRLSMRPSRVLNSSLPIKDRE
ITKNTKLQVGDIIRGFVKNVSDKGLFVNLGGDVVALVKIKNLSDSYLKDWKEHFQVDQLV
KGRIISLADGRIEMSLKQSVVEKDYVPPITISDLKEGQTVTGKVRKVEEFGAFIDIDGSD
RLSGLCHRSEMADRMVQDARTLYNEGDRVKARVLKVDVENKRINLGLKPSYFKDGDEDDV
DVDSDSDAGAALNGGADSDSDEEMSDIGGALVVGESDDESDEEKDSDIEMTEAPEEGLIG
LEAGGFDWAAANLDADDHGNADVAEVPSKKAKKRREPQGIVDKTAELDVNGPQTASDFER
LLLGQPDSSELWIAYMASQMQVNDLSSARQIAERALKTINIREETEKLNVWIAYLNLEVA
YGTDETVQEVFKRACTYNDDREVHERLASIYIQSGKYKEAEDLFEKIVKKYGSEAPHVWY
NYAHFLHTKSNKPEQARALLKRATQVLGNTKDTYLYLLPKFAALEFRSPNGDREQGRTLF
EKLLATYPKRFDLWNQLLDLETSASSVAKNPADPSVIRDLFERGTKVKGLRPRQAKAWFR
RWAQWEEKFGDAKSREKVSAKAQEWARAKAAATGKALEDQGQEEGESSGAEEEGEE
NT seq
5391 nt
NT seq
+upstream
nt +downstream
nt
atgggttcgctgaagagaaaggagggccccgatggctcctctgcttccaaatcgaagcgt
gcgaagtcgggcgagaccacgaaggacacgaaaattgacagcaataaggatgcaaagcaa
ctcaagaccccggcggttgcgaagccaattacaacgccagtagtcactgttctcaaggat
gaggagcctttgttcccacgtggcggcggcagcgtcttgacgcccctcgagcagaagcag
atctcgatccaggcgaagaaggatgtgctgttcgaggaagcaaagaagggcggtaaggag
gacacggctgctaggtccaagaagaagcgcaaatcaaagatagaagagcctgcgacaaaa
tccaaagacgaggattcggtcaagattgagagcttgaacttcaagcgcctagtcaagggc
tcattagtccttggtaccatttgtggtatcagccccctcgagattgccgttgcgctcccg
aataacctgattggccacgttcccatcactgccatctccgagtctttgacacaacggctg
caggcgctgcaggcgaatggcgagaaaggcgatggggaagaatcaggggatgagaataac
cttgacgacatcgacattaatctattcgtccatctcggccaatatgtgcgtgcctatgtc
gtgtcgacaatagacgagtctgtcgccgggaagaccaggcgtcacattgagctgtcgctc
taccctgcgcacgcgaatagcggcctgtccgagcaagacattgttctgaacagcacgctc
atggcgtctgttgtcagtgtcgaggaccacggttttgtgatggatattggcatctcagac
tcccagctcaaggggttcttaccacgcaagcagcttgaccccagcattcctgaagagacc
gtacagccgggctctgttctgctctgcatagtgacaggcaaggctgctagcggcaaggtt
gtccaactctccactctcgtggaccggctaggcaaccccaagcacttcccagctgaggct
accactatcgataccttccttccaggtactgctgccgaagtgctggtgtctgaagttcat
acacatggcctggttggcaaggttatgggccacttggatgtgaccgcggacatcgttcac
tcaggatctgggcccgacggcgctgatctggttaaccaatacaaggtgggctctcgcgtt
aaggccagagtcatctgcaacttcccgaccgcgaacaagccaaagctgggtatctcctta
ttgccgcatgtgctctcacttaaaccgaagaccactacaaaggatggacaggaagttctg
ccgacagatgtccttgcccactcggcaattatccaagagtgcagggtggaacgggttgag
cctggtatcggtctctacgttaacgttggcgtagaaggcgtgtcgggctttgttcacatt
tctagagtcaaggacggcaagattgacacgctgtttgagaacagcggcccgtataagatt
ggttcagttcatccgggccgtgtggttgggtacaactcgtttgatggcgtctatctcctt
tccctggagaagagcgtccttgaacagcccttcctacgcattgaagacattcccattgga
gctgtggtctctggtcaggtggagaaactcgtggttaatacgcaaggttttggtggtctt
atcgtcaagattgcggagggcatctcgggcctggtacctgagatgcatgtttctgatgtc
cacctgcagcaccccgagaagaagttcagagagggcatgaaagttaaggcccgcgttctg
tcgaccaacccagccaggcatcaagtacggttgacgctcaagaaaacgctggtcaactct
gatgccccagcaatcaagtcgtatgatgaattggctgtcggcatgcaagcttttggcaca
attgttgctgtcctgcaacacggtgccattgtgcagttctacgggcagctgcgcggcttc
ctccctgtatctgagatgagtgaagcctacattcacgatcccaaggagcacttccgtgtt
ggccagaccgtcagcatctatgttctcagcttcgatcctgaagttgctaggctgatcgtc
tcgtgcaaggatccttctgcctttggtctagagaagcagctcgccctgaagaagctccag
gttggcgatgtggtgtctgcaaaagtcacgcagaagaccgaggatgacgtcttcgttgag
ctgattgacagttcattgaaggccattcttcctgtaggtcatctaacggacaagtcggtc
aataaaacccaggcagcgctcaagcgcatccacgttaaccaaaccctcaccgaactggtt
gtccttgagaagaacgaaggacgtcggtccattattttgtcgcacaagcctagtcttgtc
caggccggcaaagagggcaagctcatctccactgtcgatgatgcacgtcttggggagcag
gtgcccggcttcgtccggaatattactgcttcagctgcctttgtgcagttcggcagcaag
ctgacggccctccttcccaagtcactaatgccacaggactggcacgacaaacccaacttt
gggcttcacaagtaccagtctctccttgttaagatcacatcgatcgacaaggagcttggt
cgcttggtggttgcgattccatcggctgctgatcaggaatcgaagaagccagaaaagccc
gccgaccaggccgtcaaccccttagatgaaaccgtgacgaccatggctgaccttaccatt
ggcaagctgacgaaggccagggtcagggcagtcaaggagacacagcttaatgtcgaaatc
gcagacaacatccagggacgtatcgatgtgtctcagatctttgataagtgggaggatatc
cctgatccaagaaggccactcaagcgctttaagccaaaagatattatcgacgtccgcgtc
ctcggcatccacgatgcccgcaatcaccggttcctgcccatcactcaccgctccagccat
gcggtcctagaactttctgcaaaacccagtgatgtccaagcaccaagtctccctgagcct
ctatctctcgagaagatcgaagtcggttctacccacctcgccttcgttaataatgttgct
tccaactatctgtgggtcaacctgtctcccaacgtccgtggcagaatcagtgccatggaa
gcctccaatgatttgtccaaattggccaatctggaaaggagctttcctatcggctgtgcg
ctcaaggttcgggtactctccgtagacaaggagaaaagcagagtcgacctatcggctcgg
acaccgggtgcttcccatgaactcacctgggacatgatcgagcagggtatggtcctgcct
gctaaggtcaccaagatcaacgaccgccaggttattgtcaagctcagcgagtccgtggcc
gggcctgttcatcttcctgacctggctgatgactacgatgaggccaaccctttgtcgcac
tccaagttcgaaattgtgcgcgtcgccgttgtcgaggtggataagagcaacaagaagctg
aggctctcaatgaggccgtcaagagtgctcaactcgtccctgccaataaaggatcgggag
attaccaaaaacacaaagcttcaagttggcgacatcatccgtggtttcgtcaagaacgta
tctgacaagggtctgttcgtcaacctcggcggcgatgtcgttgccctggtcaagatcaag
aatctctcagattcctacctcaaggattggaaggaacatttccaagttgatcaattggtg
aagggccgcatcatctcacttgcggatggccgtatcgagatgagcctgaagcagtctgta
gttgagaaggattacgttcctccgattaccatttcggatctaaaggaaggccagacggtc
actggtaaggtccgtaaggtggaggagtttggtgccttcatcgacattgacggctcggac
cgtttgtctggtctctgccaccgcagcgagatggccgacaggatggttcaagacgccagg
actctgtacaatgaaggcgaccgtgtgaaggcccgtgtcctgaaggtcgacgtcgagaac
aagcggattaaccttggcttaaagccatcctatttcaaagacggcgacgaggatgatgtg
gatgtcgatagcgactcggatgctggcgcagctctcaacggcggggctgacagcgactcg
gatgaggagatgagcgacattggcggcgcccttgtcgtcggtgaaagtgatgacgagtct
gacgaggaaaaggacagcgatattgagatgacggaagctcctgaggagggcttgattggg
cttgaagctggtggtttcgactgggcagctgccaacctggatgccgacgaccatggcaat
gcggatgtcgcggaagtcccaagcaaaaaggctaaaaagcggcgcgagcctcaaggcatc
gtcgacaagacggccgagctcgatgttaacgggccgcaaactgcgagtgacttcgagcgt
ctccttctcggccaacccgactcatccgagctgtggattgcctacatggcctcacagatg
caggttaatgacctttctagtgccagacagatcgccgagcgtgcccttaagaccatcaat
atccgagaggagaccgagaagcttaatgtctggattgcctacctcaacctggaggtcgcc
tatggcacggacgagacagtccaggaggtcttcaagcgtgcgtgcacgtataacgacgac
cgggaggtccacgaacggctggcgagcatctacatccagtcgggcaagtacaaggaagct
gaagacctcttcgagaagatcgtcaagaaatacggctccgaagcccctcacgtctggtac
aattacgcgcacttcctgcacaccaaatccaacaagccggagcaggcacgcgccctactc
aagcgcgcgacccaggtcctcggtaacaccaaggacacttacctctatctgctgcccaaa
tttgccgcgctcgaattccgctcgcccaacggcgatcgcgagcagggccgtaccctcttc
gaaaagcttctcgctacctaccccaagcggttcgacctgtggaaccagctgctcgatctc
gagacgtcggcatcgtcggttgcgaagaacccggccgatccgtcggttattcgtgacttg
ttcgagcgtgggaccaaagttaagggcctgcggcccaggcaggctaaggcttggttcaga
cggtgggcgcagtgggaggagaagtttggcgatgcgaagagcagggagaaggtgtccgct
aaggcgcaggaatgggctagagctaaggcggctgcaacggggaaggcacttgaggatcaa
ggtcaagaggagggggaatctagcggcgctgaggaggagggtgaggagtaa
DBGET
integrated database retrieval system
