Thermochaetoides thermophila: CTHT_0027430
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Entry
CTHT_0027430 CDS
T03100
Name
(RefSeq) hypothetical protein
KO
K27407
RNA-binding protein VTS1
Organism
cthr
Thermochaetoides thermophila
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cthr03019
]
CTHT_0027430
04131 Membrane trafficking [BR:
cthr04131
]
CTHT_0027430
Messenger RNA biogenesis [BR:
cthr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
CTHT_0027430
Membrane trafficking [BR:
cthr04131
]
SNARE
SNARE associated proteins
Others
CTHT_0027430
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_2
SAM_1
SAM_Ribosomal_mS41
DUF1031
Motif
Other DBs
NCBI-GeneID:
18256781
NCBI-ProteinID:
XP_006693200
UniProt:
G0S749
LinkDB
All DBs
Position
Unknown
AA seq
631 aa
AA seq
DB search
MLNMSNIMSNRNSTPEASSISSLRPPSSRAVGSTPHGLRASADMASLTGKSAAGRIRPSS
DFYGQVHTGSGQGNADLDPQEKLAQQWIADIDQCETTLEEMAAATLDQDFKDELSAIEQW
FRVLSEAERTAALYALLQQATQVQIRFFIQVLQQMAKNHPLAGVLSPANFDKDPMSNRLS
DAMSKLNVNDSARNSLARPSGSTNVKRSSGLDPQTINAMFPDAAAAIASEKAKFAQQMGT
TPSSARNSMVDNRNSLVAPTISAPKEEQNPASPWGPNPNDPSRPKSSGQTSTIGQTPMGQ
APMGQFVQPPPSAGALRSPRPQITSNTNIQSTTLTAPEQPLTDLPLLSPYGGSGNWASMV
NTPLAPTFSQAQVNSPAAAADMVANATAMKLAALSTVNNRFALDDVRKYRRARSNEPGGQ
SQNNNNNANNTLGSGAPAIPGTITVSDHSTGTLGRDQMMLPQEQNMSFAAHRSRPNSPGI
ALQNYGAPALPFASPQNNGFLSAYNGASTLLPNGLAPVNFAQFGLGGHHEGYHSDHSEMV
RGRSPRGRRGTSKPPEDPTDPTLLQDIPAWLRSLRLHKYTENLKDMKWQELIELDDKQLE
ERGVNALGARRKMLKVFEQVKEARREGKLPG
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgctcaacatgtccaacatcatgagcaaccgcaacagcactccagaggcctcgagcatc
tcgtcgttgcgtccgccctcgtcgcgcgcggtcggttcaaccccccacggtcttcgtgcg
tcggccgacatggcttccttaaccggaaaaagtgccgcgggcaggatccgaccttcgtcc
gacttctatggccaggtgcataccgggtccggtcagggtaacgccgacctggacccgcag
gaaaagctcgcccagcagtggattgcagacattgaccagtgcgagaccacactcgaggaa
atggctgctgcaactctcgaccaggacttcaaggatgaactgagcgctattgagcagtgg
tttcgcgttttgagcgaagccgaacgcacggctgctctgtatgcgttgcttcagcaggcc
acgcaggtccagatccgtttcttcattcaggtcttgcagcagatggcgaagaaccaccct
ctggcgggcgttctgtctcctgcgaactttgataaggaccccatgtcgaaccgtttgagc
gacgctatgagcaaactcaatgttaacgattcggctcggaactcgttggctcgccccagc
ggcagcacgaacgtcaagcgttcgtcaggtctcgatccccagacgatcaatgccatgttc
cccgacgccgctgcggccattgcttcggagaaggccaagtttgcgcagcagatgggcacc
actcctagctcggctcggaacagcatggtggacaatcgtaattctttggttgccccgact
atttcggctcccaaagaggaacagaatcctgcttcaccctgggggcctaatcccaatgat
ccgtcacgtcctaagtcctcgggtcagacttcgaccattggccaaacccccatgggacag
gctccgatgggtcagtttgtgcagcctcccccatcggctggtgctttgcgttctccccgt
cctcagattacgagcaacaccaatatccagtcgaccacgcttactgcgccggagcaaccg
cttaccgatctgcccctcctgtctccctacggtggtagtggtaattgggcttcgatggta
aacacccccttggcgccgaccttcagccaagcgcaggtgaacagccccgccgccgctgct
gatatggttgcgaatgccacggccatgaagcttgcggctctctcaactgtcaataatcgg
ttcgcgctcgatgatgttcgcaagtaccgccgtgctcggtcgaatgagccgggtggtcag
agccagaataataacaataacgccaacaacactctaggctcgggtgctccagcgattccc
ggaacgattaccgtcagcgatcatagcactggcaccttaggccgggatcaaatgatgctt
ccacaggagcagaacatgagctttgctgcgcaccggtcgcggcccaactctcctggtatc
gcgctgcagaactacggggcgccggcgctgcccttcgcttctccgcaaaataatggtttc
ttgagcgcctataacggtgcgtcgactcttttgcctaatggactggctccagtgaatttt
gcgcaatttgggctgggcgggcaccacgaaggctaccattcggaccactcagagatggtt
cgcggccggtctccgcgtggccggagaggcacgtcaaagcctcctgaggatcctaccgac
ccgacacttctgcaggacatccctgcctggctgcggagcttgcgcctgcacaagtacacg
gagaatctcaaggatatgaagtggcaagagctcattgagctggatgacaagcagcttgag
gagcgtggcgtcaatgcgctgggtgctagacgcaagatgcttaaggtattcgagcaggtc
aaagaggccaggagagaggggaagcttccgggctag
DBGET
integrated database retrieval system
