Thermochaetoides thermophila: CTHT_0027940
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Entry
CTHT_0027940 CDS
T03100
Name
(RefSeq) putative RNA export mediator protein
KO
K18723
nucleoporin GLE1
Organism
cthr
Thermochaetoides thermophila
Pathway
cthr03013
Nucleocytoplasmic transport
cthr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CTHT_0027940
03015 mRNA surveillance pathway
CTHT_0027940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cthr03019
]
CTHT_0027940
Messenger RNA biogenesis [BR:
cthr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CTHT_0027940
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GLE1
MR_MLE_N
Adeno_E1B_55K_N
Motif
Other DBs
NCBI-GeneID:
18256832
NCBI-ProteinID:
XP_006693251
UniProt:
G0S7F3
Structure
PDB
PDBj
LinkDB
All DBs
Position
Unknown
AA seq
529 aa
AA seq
DB search
MAGSSPLNHHLWSSPSRTVEEILAEDRNSEARHRYLLELARKEHERVREEAARIYREQLA
REERERLLAERRKEEERIRLEQQIAAENARLNALKATRIEIPPLLPDPVPAPSTVNGKPT
LPAAVATEAKRCPSEPSLVNGIASNGVVEAPAAASIKTLEPAKPAASAFKAAGSATTAAP
VAPIASVQPSTNGVVSAVASTPKTAPPAPTETPPDRYVEIHRNLKGLRKYMAEQAKTNLK
LKQRMGDMRREIRKSVGQLTTGGMAANKDKQQKIKSILTEALSNQVESALVDPNNFVVEP
RKPVEGATNNDPLLPSIFVYLINIFAKAAISQFINEAGARPETADPVGICVAAILSEPDF
LWRGASLIDILIAKFRIVCPVLFGYRGSEKTEQGRQRLGWWKESGQWISEQQHMDRMTGL
GAGFAAISLRKFALSKKQNPYPPRFYWMAMAKIVNTPPAEISNTQCVVLKAMVQNYEAKF
IEFYGSAAIAALRTALIDFPARAPHKSAAVNSLEVLAQMLKRDTGLDLG
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggccggttcttctcctttaaatcatcacctctggtcgagcccatcgcgaacggtcgaa
gaaatcctcgccgaagacagaaactccgaagcgcgccaccgctacttgctcgaactcgct
agaaaggaacatgaacgagtgagggaagaggcagcgcgcatataccgtgagcagctggct
cgagaagagagggagcgactcctcgcagagcgccgaaaggaggaagagagaatcaggctt
gagcaacagattgcggctgaaaatgcccggctgaacgctctcaaggcaacaaggatcgag
attcctccattactaccggatcctgtgcctgctccttcaacagtaaacggaaagccgact
ctccctgctgctgttgcgactgaggcgaagcgctgcccttccgagccttcgctggtgaac
ggcatcgcctcgaatggcgtcgtcgaagcgccagcagccgcttctatcaagaccctagaa
cctgcgaagcctgcggcgtcagcgtttaaagcagcgggctctgctacgactgccgcgccc
gttgcgcctatagcgagtgtgcaaccatcgacaaatggggtcgtctcggctgtcgcgtct
acacccaagacagctccaccggctccaaccgaaacacctcccgacagatatgttgagatt
cataggaacttgaagggcctccgaaagtatatggctgagcaggccaaaacaaaccttaaa
ttgaagcagcgcatgggcgacatgaggcgtgagatccgaaagtcggttggccaactcacc
acaggcggcatggctgccaacaaagacaagcaacaaaaaatcaagagcatcctcaccgag
gctctttccaaccaggtcgagtctgcgctagtggaccccaacaactttgttgttgaaccc
aggaagccagttgagggggcgacaaataacgaccctctgcttccatccatctttgtttat
ctcatcaacatctttgcaaaggctgccatctcccaattcatcaatgaagcgggagcgcgg
ccggaaaccgcagatcccgtcggcatttgcgtggccgccatcttgtcagagcctgatttc
ttatggcgcggggcttccttgattgacatcctgattgcgaagttccgaattgtctgccct
gtcttgtttggctatcgagggagcgagaagacggagcagggtagacagagactcggctgg
tggaaggaatcaggccagtggatttccgagcaacaacacatggaccgtatgacaggtctc
ggagccgggttcgctgccatctctcttcgcaagtttgctctctcaaaaaagcagaatcct
taccctccgcggttttattggatggcaatggcaaagatcgtcaatacccctcctgctgaa
atttccaacacccaatgcgttgtcttgaaagcgatggtgcaaaactacgaggcaaaattc
attgaattctacggaagcgctgccattgcggctttgcgtacggcgctcattgacttccct
gctcgggcaccgcacaaatcagctgcggtgaactcgctggaggttctggctcagatgttg
aagagagacactgggctggatcttggataa
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