KEGG   Thermochaetoides thermophila: CTHT_0028490
Entry
CTHT_0028490      CDS       T03100                                 
Name
(RefSeq) hypothetical protein
  KO
K10752  histone-binding protein RBBP4
Organism
cthr  Thermochaetoides thermophila
Pathway
cthr03082  ATP-dependent chromatin remodeling
cthr03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cthr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    CTHT_0028490
   03083 Polycomb repressive complex
    CTHT_0028490
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cthr03036]
    CTHT_0028490
Chromosome and associated proteins [BR:cthr03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     CTHT_0028490
  Histone modification proteins
   HAT complexes
    HATB complex
     CTHT_0028490
   HDAC complexes
    Sin3A-HDAC complex
     CTHT_0028490
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     CTHT_0028490
    PRC2.2
     CTHT_0028490
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     CTHT_0028490
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    CTHT_0028490
  Chromatin remodeling factors
   NuRD complex
    CTHT_0028490
   NuRF complex
    CTHT_0028490
   NuRF complex (fruit fly)
    CTHT_0028490
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd WD40_WDHD1_1st WDR55 EIF3I Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_SPT8 Beta-prop_IFT122_1st NBCH_WD40 WD40_RFWD3 WD_LRWD1 Beta-prop_DCAF12 ANAPC4_WD40 MIOS_WD40 Beta-prop_WDR19_1st Beta-prop_RIG_1st Beta-prop_SCAP WD40_MABP1-WDR62_1st TAF1C_beta-prop
Other DBs
NCBI-GeneID: 18256887
NCBI-ProteinID: XP_006693305
UniProt: G0S7Q9
LinkDB
Position
Unknown
AA seq 439 aa
MPPADVVDDHDVAIDDQDDADMEQRLINEEYKTWKKNSPFLYDMILSTALEWPTLTTQWF
PDVKDVKEKNYRVHRLLIGTHTAEGKPNYLQIAEVEIPKSVDPNPRDYDDERGEIGGYGG
KASSGEPPVIKFNIVQKIDHPGEVNKARYQPQNPDIIATLAVDGKVLIYDRTKHSLQPTG
TPNPQIELVGHKEEGFGLNWNPHVAGCLASGSEDRTVLLWDLNTAQGKTLKPSRRYTHHT
HIVNDVQYHPMVPHWIGTVSDDLTLQILDVRSAETTRAAVIARDGHSDAINALAFNPRSE
FLIATASADKTIGIWDIRNLRQKIHTLEGHNDAVTSLAWHPVETSILGSGSYDRRVIFWD
ISRAGEEQLPEDAEDGPPELLFMHGGHTNHLADFSWNLNDPWLVCSAAEDNLLQIWKVAD
SIISQDDVEMPMNELDASN
NT seq 1320 nt   +upstreamnt  +downstreamnt
atgcctcccgccgacgtggttgatgatcatgacgtcgctatcgacgatcaggatgatgcc
gacatggagcagcggctcatcaatgaggaatacaagacttggaagaagaacagtccgttt
ctctatgacatgatcctgagcacggccttggagtggccgaccctgactacacagtggttt
cccgatgtcaaggacgtaaaagagaagaactacagggtccacaggctacttattggcacg
cacactgcagagggcaagccgaattacctccagatcgccgaggtcgagattccgaaatcg
gtcgaccccaacccgcgcgattatgacgacgagcgtggtgagattggtggttatgggggc
aaggcgtcatcaggcgagccgcctgtcatcaagttcaacattgtccagaagattgatcac
cctggcgaggtcaacaaggcacgctatcagccccagaaccctgatattatcgcaacgctt
gccgtcgatggcaaggtcctgatctacgaccgcaccaagcacagtctgcagcccactggt
acccccaatcctcagatcgagttggtcggccataaggaggaaggctttggtctgaactgg
aacccgcatgtggctggttgtctcgcatctggtagtgaggataggacggtgctactttgg
gatctcaacacagcgcaaggcaagactctgaaaccgtcacgccggtatacacaccacacc
catatcgtcaatgacgttcagtaccatcccatggtcccgcactggattggcaccgtctcc
gacgatctgacacttcaaatcctggacgttcggagtgccgagacgacgagggctgctgtt
attgctcgtgacggccacagcgacgccatcaatgcccttgctttcaacccgcgctccgag
ttcctcatcgccaccgcctcggccgataaaacgatcggtatctgggatattcgcaacctc
aggcagaagatccacacgctcgagggccataacgatgccgtgacctcgctggcatggcac
cccgtcgagaccagcattctaggcagcggcagctacgacaggcgcgtcatattctgggac
atcagccgcgcgggcgaggaacagctcccagaggatgccgaagatggcccgccggagctc
ctctttatgcacggtggccataccaaccatctggctgacttcagctggaacctaaacgat
ccctggctcgtgtgcagcgccgctgaagacaacctgctccagatctggaaggtggctgat
tctatcatcagccaggacgacgttgagatgccaatgaacgaactggacgcgtccaattag

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