Thermochaetoides thermophila: CTHT_0028490
Help
Entry
CTHT_0028490 CDS
T03100
Name
(RefSeq) hypothetical protein
KO
K10752
histone-binding protein RBBP4
Organism
cthr
Thermochaetoides thermophila
Pathway
cthr03082
ATP-dependent chromatin remodeling
cthr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CTHT_0028490
03083 Polycomb repressive complex
CTHT_0028490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cthr03036
]
CTHT_0028490
Chromosome and associated proteins [BR:
cthr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
CTHT_0028490
Histone modification proteins
HAT complexes
HATB complex
CTHT_0028490
HDAC complexes
Sin3A-HDAC complex
CTHT_0028490
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
CTHT_0028490
PRC2.2
CTHT_0028490
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
CTHT_0028490
Heterochromatin formation proteins
Other heterochromatin formation proteins
CTHT_0028490
Chromatin remodeling factors
NuRD complex
CTHT_0028490
NuRF complex
CTHT_0028490
NuRF complex (fruit fly)
CTHT_0028490
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Beta-prop_IFT122_1st
NBCH_WD40
WD40_RFWD3
WD_LRWD1
Beta-prop_DCAF12
ANAPC4_WD40
MIOS_WD40
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
TAF1C_beta-prop
Motif
Other DBs
NCBI-GeneID:
18256887
NCBI-ProteinID:
XP_006693305
UniProt:
G0S7Q9
LinkDB
All DBs
Position
Unknown
AA seq
439 aa
AA seq
DB search
MPPADVVDDHDVAIDDQDDADMEQRLINEEYKTWKKNSPFLYDMILSTALEWPTLTTQWF
PDVKDVKEKNYRVHRLLIGTHTAEGKPNYLQIAEVEIPKSVDPNPRDYDDERGEIGGYGG
KASSGEPPVIKFNIVQKIDHPGEVNKARYQPQNPDIIATLAVDGKVLIYDRTKHSLQPTG
TPNPQIELVGHKEEGFGLNWNPHVAGCLASGSEDRTVLLWDLNTAQGKTLKPSRRYTHHT
HIVNDVQYHPMVPHWIGTVSDDLTLQILDVRSAETTRAAVIARDGHSDAINALAFNPRSE
FLIATASADKTIGIWDIRNLRQKIHTLEGHNDAVTSLAWHPVETSILGSGSYDRRVIFWD
ISRAGEEQLPEDAEDGPPELLFMHGGHTNHLADFSWNLNDPWLVCSAAEDNLLQIWKVAD
SIISQDDVEMPMNELDASN
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccgccgacgtggttgatgatcatgacgtcgctatcgacgatcaggatgatgcc
gacatggagcagcggctcatcaatgaggaatacaagacttggaagaagaacagtccgttt
ctctatgacatgatcctgagcacggccttggagtggccgaccctgactacacagtggttt
cccgatgtcaaggacgtaaaagagaagaactacagggtccacaggctacttattggcacg
cacactgcagagggcaagccgaattacctccagatcgccgaggtcgagattccgaaatcg
gtcgaccccaacccgcgcgattatgacgacgagcgtggtgagattggtggttatgggggc
aaggcgtcatcaggcgagccgcctgtcatcaagttcaacattgtccagaagattgatcac
cctggcgaggtcaacaaggcacgctatcagccccagaaccctgatattatcgcaacgctt
gccgtcgatggcaaggtcctgatctacgaccgcaccaagcacagtctgcagcccactggt
acccccaatcctcagatcgagttggtcggccataaggaggaaggctttggtctgaactgg
aacccgcatgtggctggttgtctcgcatctggtagtgaggataggacggtgctactttgg
gatctcaacacagcgcaaggcaagactctgaaaccgtcacgccggtatacacaccacacc
catatcgtcaatgacgttcagtaccatcccatggtcccgcactggattggcaccgtctcc
gacgatctgacacttcaaatcctggacgttcggagtgccgagacgacgagggctgctgtt
attgctcgtgacggccacagcgacgccatcaatgcccttgctttcaacccgcgctccgag
ttcctcatcgccaccgcctcggccgataaaacgatcggtatctgggatattcgcaacctc
aggcagaagatccacacgctcgagggccataacgatgccgtgacctcgctggcatggcac
cccgtcgagaccagcattctaggcagcggcagctacgacaggcgcgtcatattctgggac
atcagccgcgcgggcgaggaacagctcccagaggatgccgaagatggcccgccggagctc
ctctttatgcacggtggccataccaaccatctggctgacttcagctggaacctaaacgat
ccctggctcgtgtgcagcgccgctgaagacaacctgctccagatctggaaggtggctgat
tctatcatcagccaggacgacgttgagatgccaatgaacgaactggacgcgtccaattag
DBGET
integrated database retrieval system