Thermochaetoides thermophila: CTHT_0029340
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Entry
CTHT_0029340 CDS
T03100
Name
(RefSeq) transcription initiation factor IIF subunit alpha-like protein
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
cthr
Thermochaetoides thermophila
Pathway
cthr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CTHT_0029340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cthr03021
]
CTHT_0029340
Transcription machinery [BR:
cthr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
CTHT_0029340
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
18256972
NCBI-ProteinID:
XP_006693389
UniProt:
G0S846
LinkDB
All DBs
Position
Unknown
AA seq
758 aa
AA seq
DB search
MSAPPPQGPPPAARPPGPPRPPGSGPPPSMQFHRKGVFNPLVARKKPRPKPACALPPKDH
KALMELNASQAAHKFDELLGPENEAALKRLQEERARNGGWSETPDNCQEFPLVMTKRSML
EGLRYHIMRLNKKTDEDIDVTNQEQFPRPVTLLRRDPRLPPAHKMNQTKAEEQTPRDPAE
AAELERIRQLKAEREAQRAADLAQIAPVLRNNEPKQKQNNNKKEKPTAFYGRDTEAQKKE
SRIHYEETWPWHLEDAEGKAGVWVGSYVSNLSDLHVALVIDGNRFRMIPLERYYRFDEKP
KFETLSLDDAEKMMYEVKEIKRWVMKQKEQEALEREKNETRQFLRGPVRVKTESATSRAA
RRDERADDYELDMSGDEFQDDDENPGFDADDEETKETKNRLRREHIQANTFGEGDDQKVE
QEEREEQLERLRRKMLGKQTLKTLKKFEHAMDFEDMESDDENNPFTDHEDSSDEESEDKE
DEDSKKEPSGANTKGNVTPSSKQRVDTKKAPNAASNNNNNNNNNNNNNNNNNNNNNSNNN
NNNNNNNSSSSSNNNNNKLKRPGSAHLSESSDNENARKKIKTGTKTAPATTLPSRGATPI
PGRPKNPQASAMSDGEATAGEISDAGSKLKPKLKVKPGVRPGGTPAGSRSGSPAPSGAPK
PSTGTTPTPQQPAQAQASSQSQQPQAAAAAVPPAPDRIQPADIAAALAPYAKEGISLGNL
LRKFKDRIDKPGHISRSEWIQMVKQTAVYGPDKLLRPK
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctccgccgccgcaagggccgccgccggcggctcgcccgcctggccctccccgt
ccgcctggcagtggccctcctcccagcatgcagtttcaccgcaagggcgtcttcaatcct
cttgttgccaggaagaagccgcgcccgaagccagcctgcgctctcccgccgaaggaccac
aaggctttgatggagctcaacgccagccaggccgcccataagtttgacgagctgcttggc
cccgagaatgaagctgctctgaagcgcttgcaggaagaacgcgcccgcaatggtggttgg
agcgagactcccgataactgtcaggaattcccgcttgtcatgaccaagcgctcgatgctc
gagggtctgcgctaccacatcatgcgcctcaacaagaagaccgacgaggacatcgatgtc
accaaccaagaacagttcccgcgccccgttacccttctgcgtcgtgacccccgtttgcct
ccggcccacaagatgaaccaaactaaagcagaggagcagaccccgcgtgatcctgccgaa
gccgccgagctggagcgcattcgccaactcaaggctgagcgagaggctcagcgtgccgca
gacttggcccagatcgcgcccgttctgcgtaacaacgaaccgaagcagaaacaaaataac
aacaaaaaagagaagccaactgcattttacggccgcgacacagaggcccagaagaaggag
agccggatccactatgaggagacctggccctggcatttggaggacgctgaaggcaaggct
ggtgtctgggttggctcgtacgtgtctaatctatcagacctccatgttgcgcttgtcatc
gacggaaatcgcttccgtatgatccccctggagcgctattaccgattcgatgagaagccc
aagttcgagactctctcactggatgatgccgagaagatgatgtatgaggtgaaggaaatc
aagcggtgggtcatgaaacaaaaggagcaggaggcattggaacgtgagaagaacgagaca
cgccagttcttgcgcggtcccgtccgcgttaagaccgagagcgctacatcccgcgcggcc
cgtcgcgacgagcgcgccgacgactatgagctggacatgtccggcgatgagttccaggat
gatgatgaaaaccccggctttgatgccgacgatgaggagactaaggagacgaagaatcgt
ctgcgccgtgagcacatccaggccaacactttcggtgagggtgacgaccagaaggtcgaa
caagaggagcgcgaggagcagctggagcgcctgcgccgcaagatgctcggcaagcagacc
cttaagacattgaagaagtttgagcatgctatggactttgaggacatggaatctgacgat
gaaaacaacccgtttacggatcacgaggactcgtcagatgaagaatccgaagacaaggag
gatgaagacagcaagaaggagccctcgggcgccaataccaagggcaacgtgacgccgtcg
agcaagcaacgcgttgacacgaagaaggctcccaatgccgccagcaacaacaacaacaac
aacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacagcaacaataac
aacaataacaacaataacaacagcagcagcagcagcaataataataataataagctcaag
cggcccggctccgcgcatctttctgagtcgagcgacaacgagaatgcccgcaagaagatc
aagactggcaccaagaccgcgccggctactacactgcccagccgtggcgctacgcctatt
cctggtcggcctaagaacccacaggcatcggctatgagcgacggagaggctaccgccggc
gagatctctgatgcgggctctaagctcaagcccaagctcaaggtcaagcccggcgtgcgc
cctggcggtaccccggccggttcgcggtcgggtagtcctgccccctctggcgctcccaag
cccagcacgggcaccacgcccactccgcaacagcctgcccaggcgcaggcttcctctcag
tctcaacaaccccaggcagctgcggccgcagtgccgccggcacccgaccgcatccagcct
gctgacatcgctgccgcgctcgcgccgtatgcgaaggaaggtatttcgctcggcaacctg
ctgcgcaagtttaaggatcgcatcgataagcctggccacatctcgcggtcggaatggatc
cagatggtcaagcagacggccgtgtatgggccggataagctccttcggcctaagtga
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integrated database retrieval system
