Thermochaetoides thermophila: CTHT_0030980
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Entry
CTHT_0030980 CDS
T03100
Name
(RefSeq) putative chromatin structure-remodeling complex protein
KO
K11770
chromatin structure-remodeling complex subunit SFH1
Organism
cthr
Thermochaetoides thermophila
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cthr03021
]
CTHT_0030980
03036 Chromosome and associated proteins [BR:
cthr03036
]
CTHT_0030980
Transcription machinery [BR:
cthr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
RSC complex
CTHT_0030980
Chromosome and associated proteins [BR:
cthr03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
CTHT_0030980
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
GATA
Zn_ribbon_LapB
Motif
Other DBs
NCBI-GeneID:
18257136
NCBI-ProteinID:
XP_006693545
UniProt:
G0S475
LinkDB
All DBs
Position
Unknown
AA seq
599 aa
AA seq
DB search
MAVRSNSQQAVFSSYAPRLRTYNNALLQPILPGSGQGPLSRTTKRGTAIINYAEDGYDDL
DDDEDDGRRRPTGLRSLRRDDSTSKVDPSEKVGKDTSVPVEMQGYWRDWMGKNKPNRSDV
HNYVQACLPLTLIPIRIDLDIPSFTPQPPLPPVPGGSVDNTHPLYKPQEPTVPYRLRDTF
LWNLHESLITTDYFATQLVQDLDLPNKQQTIAEISKQIRTQLEEYAGVALHPLFHARTNR
AKATADNTTKGTTPAPNQAQGASRADTPNAPTTSFKPGAAGSSVVQTAQGEVSARATPIP
PEAGDDSPDDTYRCIINLNITLSSQVYTDKFEWSLLHPPGTAEIFAKQTCADLGLYGEWV
PALTHAIYEAVLKLKKEACEAGGLVAGWTAFGSGTLAGGAGTEFPNDAAPTAGGEGAGWR
YDPEHLAEEWEPKLETLSKEEIEKREGDRERQIRRLRRETARFSSNTGMAGGIPIGFAFG
SLIEQEQEERLAKLRRRRRFRSPSPGRDSVAPGRGTPAAGGAGGGGAEGYGGGGGTLTEA
ERTTWRCSHCRVWGTSVWAVRDGPFGPRSLCNNCGFMYERDRKLPRWTKMLHANDPRPF
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggcagtccggtcaaactcacagcaggccgtgttctcgtcgtacgcgcctcgcctgcgc
acatacaacaacgctctcctccagcccattctccccggctccggccagggcccgctgtcg
cgcaccaccaagcgcggtactgccatcataaactatgccgaggacggctatgatgatctc
gacgacgatgaggatgatggtcgccggcgcccgaccggcctgcgcagcttgcgccgcgac
gacagcacctctaaggtcgaccccagcgagaaagtcggcaaggatacgtcggtgcctgtc
gagatgcagggctattggcgcgactggatgggtaagaacaagcccaatcggtcagatgtc
cataactatgtgcaggcttgtcttccactcaccctcatccccatccgcatcgacctcgat
atcccgtctttcactccacaacccccactgccgcccgttcccggcggttccgtcgacaat
actcatcctctttacaaacctcaggaaccgacagtgccataccgtttgcgtgataccttc
ttgtggaatcttcacgaaagtttaatcacaacggactacttcgccacgcagctggtccag
gacctcgacctgcccaacaaacagcagaccatcgcagagatcagcaaacagattcgcact
caactcgaggaatatgccggcgttgctcttcaccctctctttcatgcgcgcacaaaccgt
gccaaggcgaccgcagataatacgaccaaggggacgactcctgcaccgaaccaggctcag
ggagccagcagagccgacacccctaacgctcccacaacatctttcaagcctggagctgcc
ggctcctcggtggtgcagacggcccaaggcgaggtctcggcccgagcaacccccattccc
ccagaggcgggcgacgacagcccggacgacacataccgctgcatcatcaatcttaacatc
accctttcatcacaggtctacaccgacaaattcgagtggtcgctcctgcatcctcctggc
actgctgaaatttttgccaagcaaacctgcgccgatctgggcctctacggcgaatgggtg
cctgctctgacgcatgccatttacgaggccgtgctcaagctcaagaaagaggcctgcgaa
gctggagggcttgtcgctggatggaccgctttcggcagtggcaccctcgccggcggtgcc
ggcaccgagttccccaacgatgcagcccctaccgcgggaggcgaaggcgccggctggcgc
tatgatcccgagcacctggctgaagaatgggaacctaaactggaaacccttagcaaggaa
gagattgaaaagcgtgagggcgaccgcgagcgtcaaatccgtcgtttgcgtcgtgagacg
gcccgttttagcagtaacacgggcatggctggtggtattcctatcggctttgcctttggc
agcttgattgagcaggagcaggaggagcgcctggccaagctacggcgtcgcaggcgcttc
cggagcccgtcgcctggtcgagattcggttgcccccggaaggggtacgcctgctgctgga
ggcgcaggtggcggcggagcagaagggtatggaggtggcggtggtacgcttacggaagcg
gagaggacgacttggcggtgctctcattgtagggtgtggggcacgagtgtgtgggcggtt
agggacgggccgttcgggccgaggtccctttgcaacaactgcggctttatgtacgagcgc
gaccgcaagcttccccgctggaccaagatgctgcatgccaacgatccccggccgttctag
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