Thermochaetoides thermophila: CTHT_0032530
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Entry
CTHT_0032530 CDS
T03100
Name
(RefSeq) hypothetical protein
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
cthr
Thermochaetoides thermophila
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cthr03036
]
CTHT_0032530
Chromosome and associated proteins [BR:
cthr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
CTHT_0032530
microRNA pathway
RISC loading complex
CTHT_0032530
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_dimer
DSRM_2
Ribonucleas_3_3
Helicase_C
ResIII
DEAD
AAA_22
Motif
Other DBs
NCBI-GeneID:
18257291
NCBI-ProteinID:
XP_006693692
UniProt:
G0S577
LinkDB
All DBs
Position
Unknown
AA seq
1596 aa
AA seq
DB search
MVHDAPITGMSSPQQSPSHKKSSDAGDTEVDGYAKGLNGTDTSTDPNSPPDFDPYADADL
DVPEWAKNLKPASPAKKKKVSNRHRADNAAFDIWIEQNQHALTRSERRPVSDNDKSFQAL
VKGLGHQEIITSPRDYQLELFERAKEQNTIAVLDTGSGKTLIAALLLRWTLQNELENRAK
GMSRRVAFFLVDKVALVLQQHAVLACNLDYPIDKFCGEMIEDVEEDKSFWDKTFAENMAI
VCTADILYKCLAHSYIRMDEINLLVFDEAHHAKKNHTYARIIKDFYVDVEEDKRPRILGM
TASPVDAQVDPKVAAAELEGLLHAQIATAADPAALQYTLTRLKAEEIVEFDRRPDNWETP
LNQRLKMLVGQYEVFHKPFAFTETACAELGPWCADRYWQLFFREEDLARLEARCEMEILG
VSAYRQDTREQVSRVRQAYDLVKNHEFGRPKLSTDSLSSKVIELVKVLRKQFEDPDQDPR
CIVFVKQRNTASLLVDLLQQPEMHIEGLKSGMLVGSGRADAHWDNTKVSFRNQVRTIIKF
RKGVLNCIFATSVAEEGLDIPDCNVIIRYDLNETLIQYIQSRGRARRHGSIYIHMVERGN
PRHRRRLHENKANEDALRRFCEALPEDRKLTGNNFNMDYFLRKEMGQQQYIVPGTGAKLN
YKQALVILANFVSSLPHPPETVLAPEYVICAVPGGFQCEVMLPPQSPVRSATGKVHPRKA
MAKCSAAFELCLKLIKGKYLDAHLRPVFTKQLPAMRNARLAVSAKKKAEYQMRIKPEMWA
RRGEPKELYVTVLALENPGAVGRETMPLLLLTREPLPKLAKFTLFYGQGPDRTSQVRCVP
VPGRIVLDEEGREAKALAGFTLRVFHDVFSKDFEARVGDLPYFIAPATKGHGEGFEIEED
VRGLVDWEVVFRVQEGDRIPYDVDAAGEYADEFFKGHFVVDPYDGSRKYFLRGRRHDMKA
TDTVPEGIVPPGHAWRGVSTRDILNYSLTKWKRSREKTTLNPQQPVVEAELMPLRRNLLD
DNIGEDDLEPKQCFLVLEPLRISPLPAKTAMMAYSFPAIIHRIESNLIALDACRLVGLDI
RPDLALEALTKDSDNTGEHDAEQISFQPGMGNNYERLEFLGDCFLKMATTIAIFTLIPDK
EEFEYHVERMLLICNRNLFNNALEFKLEEYIRSMAFNRHSWYPNNLTLKSGKTIQPRRTH
LLADKSIADVCEALIGAALLTGQDRAGSTAPEQGAFDLAIRAVSTLVKSPRHSMSSYSEY
YSLYTPPAWQTAPCSSAQVDMAARFACRLGYTFRHPRLLRSAFQHPTYPSVYEHLPSYQR
LEFLGDALLDMAIVEWLFARFPGADPQWLTEHKMAMVSNQFLGCLGFMLGFHKNIACCSP
QVGKDLARYVAEMEEALLAAKEDAVRAGKTEDDWARDFWLNCSRPPKCLPDVVEAYVGAV
FVDSGYNFGEVRAFLERHIRPFFEDMRLYDTFANNHPVTMLVAVMQGQFRCQEWRVLARE
LPAGPVAVALDGEDTTSGGEFGEGETRVVCAVRCHGQTLAHAVAASGRYGKVAAAKKALE
VLRKMEVEEYRQEFGCTCAGEEGGNEEELEAHASAV
NT seq
4791 nt
NT seq
+upstream
nt +downstream
nt
atggtccacgacgctccgataacgggcatgagctcgcctcagcagtcaccttcccacaag
aagagctcagacgccggcgataccgaggtagatggctatgcgaagggcctcaacggtaca
gacacgtccactgaccccaactcgccgcctgacttcgacccctacgccgatgccgacctc
gacgtccccgaatgggccaaaaacttgaagcccgcgtcgccggcgaagaagaaaaaggtt
tccaatcggcatcgcgccgacaatgccgcctttgacatttggatcgagcagaaccagcat
gcgctgacgagatcggagcgcaggccggtcagtgataatgataagtcgttccaggcgctg
gtcaagggcctggggcatcaagagattattaccagtccgagagactatcaattggagctg
tttgagcgggcgaaggagcagaatacgattgcggtgttggacactggctcgggcaaaacc
ctcatcgccgcccttctcctgcgctggaccctccagaatgagctcgagaaccgcgccaag
ggtatgtcccggcgcgtggccttcttcctggtcgataaggtggccctcgtcctccagcag
cacgccgtgcttgcctgcaacctggactaccccatcgacaagttctgcggcgagatgatc
gaggacgttgaagaggacaagtccttctgggacaagaccttcgccgaaaacatggccatc
gtctgcaccgccgacattctttacaagtgcctggcccattcgtacatccgcatggatgag
attaatctgctcgtctttgacgaggcgcatcatgccaaaaagaatcatacctatgcaagg
attatcaaggatttttatgtcgacgttgaggaagataagcgtcctcgaatcttgggcatg
accgcctcgcctgtagatgcccaggttgatcccaaggttgctgctgctgagctggagggt
ttgcttcacgcccagatcgccacggctgctgatccggctgccctccagtataccctgacc
cggctcaaggccgaggaaattgtcgagtttgaccggcgcccggacaactgggagacgccg
cttaaccagcggctcaaaatgcttgttggtcagtacgaggtcttccacaagccgtttgcc
ttcacggagacggcctgtgctgaacttggtccgtggtgtgccgaccggtattggcagctc
ttcttccgggaggaggatctggctaggcttgaggcccgttgtgagatggagatcctgggc
gtgtcggcttataggcaagacacgagggagcaggttagtcgggtgaggcaggcgtatgac
ttggtgaagaatcatgagtttggacggccgaagctgagcacagactcgctctcgtcgaag
gttattgagctggtgaaggtgttgaggaagcagtttgaggatccggaccaggatccgcgc
tgcattgtcttcgtcaagcagcggaatacggcttcgctgcttgtggacctgttgcagcag
ccagagatgcatattgaggggttgaagtcggggatgttggttggcagcggccgcgccgac
gcccactgggacaacaccaaagtcagcttccgcaaccaagtccgcactatcatcaagttc
cgaaaaggcgtcctcaactgcatcttcgcgacctccgtcgccgaagaaggcctcgacatc
ccagactgcaacgtcatcatccgctacgacctcaatgagaccctaatccaatacatccaa
tcccgcggccgcgcccgccgccacggctccatctacatccacatggtcgagcgcggcaac
ccgcgtcaccgccggcgcctgcatgaaaacaaagccaacgaggacgccctccgccgcttc
tgcgaggctctccccgaagaccgcaagctcacgggtaacaacttcaacatggactacttc
ttgcgcaaggaaatgggccagcagcagtatattgtgcccggcacgggcgccaaactcaac
tacaaacaggcactcgtcatcctggccaactttgtctcctctctgcctcatccccctgag
accgtccttgctccggaatacgtcatttgtgccgttccaggcggcttccagtgcgaggtc
atgctccctccgcaatcccccgtccgtagcgcgacgggtaaggtccatccccgcaaggcc
atggccaagtgctcggccgccttcgagttatgtctcaagctgatcaaggggaagtacctg
gacgcgcatttacggcctgtctttaccaagcagctgccggctatgcggaatgccaggctg
gcggtgagtgcgaagaagaaggccgagtaccagatgcggattaaacctgagatgtgggca
cggaggggggagcctaaggagctgtatgtcaccgtgctggcgctggagaaccccggggct
gtgggccgcgagacgatgcctttgttgttgttgacgcgggagcctttgccgaagttggcg
aagtttacgctgttttatgggcaggggccggataggacaagtcaggtccggtgtgtacct
gtgccggggaggattgtgcttgatgaggagggacgggaagcgaaggctctggccgggttc
acgctgagggtttttcatgatgtgttcagtaaggatttcgaggctagggtcggagatttg
ccttatttcattgcgccggcgacgaagggccatggggaaggttttgagatcgaggaggat
gttaggggattggttgattgggaggtggtttttcgtgtgcaggagggtgatcgcattccc
tatgacgttgatgcagctggggaatatgcagatgaatttttcaagggccactttgtagtc
gatccctatgatggctcgcggaaatattttctcaggggtcggcggcatgatatgaaggcc
acggatactgtgcctgaggggattgtcccgccgggccatgcttggaggggtgtttcgacg
agggatattctgaattacagtctcaccaagtggaagaggtcgagggagaagacgacgctc
aatcctcagcagccggttgttgaggctgagttgatgccgttgcggaggaatctgctggat
gataatattggggaggatgatctcgagccgaagcagtgctttttggtgctggagccgttg
agaatctcgccgctccccgccaaaacggccatgatggcgtacagcttccctgccattatc
caccgcatcgagtcaaatctcatcgccctcgacgcctgccgtctggtaggcctcgatatc
cggcccgatctcgccctcgaagctttaacaaaggatagtgacaacacaggcgagcacgat
gcagagcagatcagtttccagcctggcatgggcaacaactacgagcgtttagagttcctg
ggcgactgcttccttaagatggccaccaccatcgccatcttcacgttgatcccggacaag
gaagagttcgagtaccacgtcgagcgcatgctactcatctgcaaccgcaacctctttaac
aatgccctcgaattcaagctcgaggagtatatccggtctatggccttcaaccgccactcc
tggtacccgaataacttgaccctcaagagcggtaaaactatccagccgcgccggacccat
ctgctagcagataaatccattgccgatgtctgcgaggcactcatcggcgcagcactcttg
acaggccaggatcgcgctggctcgactgcccccgagcaaggtgccttcgacctcgccatc
cgcgccgtctcaaccctcgtcaagtccccccgccactccatgtcctcctactccgagtac
tactccctgtacacccctccggcctggcaaaccgccccctgcagctcagcccaagtcgac
atggctgcccgcttcgcctgccgcctaggctacaccttccgccatccccgcctcctccgc
tcagccttccagcacccaacctatccctccgtctacgagcatcttccctcgtatcaacgc
ctcgaatttctcggcgacgccctcctcgacatggccatcgtcgagtggctgtttgcccgg
tttcccggagccgatccgcagtggctgaccgagcataagatggccatggtgtcgaaccag
ttccttggatgtctggggtttatgctgggtttccacaagaacattgcgtgctgctccccg
caggtagggaaggacctggcgaggtatgtcgccgagatggaggaggcgctgctcgcggcg
aaggaggatgccgtacgggctggaaagacggaggacgactgggcgcgtgacttttggttg
aattgctcgcgcccgccgaagtgtcttcccgacgtggttgaggcgtatgttggggcggtg
tttgtagatagtggatacaatttcggggaagtacgtgcctttttggagagacacatccgt
ccgttcttcgaggatatgcggctctacgacacgtttgccaataatcaccccgtgaccatg
ctcgtggctgtcatgcagggtcaattccgctgccaggaatggagggtgctcgcgagagag
ttgcctgcggggccggtcgcggttgcgttggatggcgaggacactactagtgggggggag
ttcggcgagggcgagacgcgggttgtgtgtgcggtacggtgtcacgggcagaccttagct
catgctgtggcagcgagtggacggtatggaaaggtagcggcggcgaagaaggcgttggag
gtgttgaggaagatggaggtggaggagtataggcaagagtttgggtgcacatgtgctgga
gaagagggggggaatgaggaggaactggaggctcatgcttcggctgtttaa
DBGET
integrated database retrieval system
