Thermochaetoides thermophila: CTHT_0033540
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Entry
CTHT_0033540 CDS
T03100
Name
(RefSeq) putative vacuolar membrane-associated protein
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
cthr
Thermochaetoides thermophila
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cthr04131
]
CTHT_0033540
Membrane trafficking [BR:
cthr04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
CTHT_0033540
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IML1
Na_Ca_ex
DEP
DEPDC5_CTD
IML1_N_fung
Motif
Other DBs
NCBI-GeneID:
18257392
NCBI-ProteinID:
XP_006693792
UniProt:
G0S5T4
LinkDB
All DBs
Position
Unknown
AA seq
2411 aa
AA seq
DB search
MSATRNAPSAALAPARGPNVPSNVHSAVRQYCATDCHFSDSPSDALSSSSMFFEPRSPHS
RQPERRWTVTINDSFIHDDVLLNLDLIGPDVKPGSVVALDLVKADSEKPPPISSYGRQPV
LDRKEGTSGPASERRYICVVKDMPREMKARFPMVEVYVAKHIADAFGMKKGTQVTISPID
ESNPAVEASHVELCFKDQYLSRADMWRMTVGELARRTVYKGQMILFMGTVKAQVTSVYVD
GRKVQSAFFGRNTKPIFRSESARYVLFIQMAREMWDFDPDGSGEIMFNKVVNGFLPALFK
KWATLRVKHLVTIVLFARVEYDMGISTELAGTSVYDDYFTGFQTSGDRRPYKDFYRVVVS
EMSSGEWTKILYQLKREFNHFRKDISTYHQQAMREFAGADMSNERDAMLNKIKAEASRAI
HGNFLEAINMALSLYSHDYIDRDLTRTGLSVVIISPSPGVFEVDPETTSQYDVGYSCFPL
KAVLENRVGSYRLDSEGNVVVKNLRVPDSLFDPVHGFQKFAPDKHGKHSERSLWRQLQEY
DDCKARLPPRQIGAGHSRHGRDLEAMPSRQHAEDSTSVSILGTSYTERRPSTATQQHQVF
SEGITCYSSAEKAEVVQSHRKSISGRSMRQEPRETSSSSSLAKTPKLMRISLGNRGFGIA
APKVATAEVSIETVGASKTLTSSRSNQDLRMIPQRIGQRQSSSRRSSIVGTPTSTFSHGS
LGSFSLAQGQQPAPDTPSKPIVIRKNQQASEPAAAMLSGSILATTLRPEPGGRDRDLYYS
NATRAEDAKKLYNSKLLAGAVPVPSNLSPKTALSPWLTLLNPSNPNPNDLEIPQLYSRWQ
HVFPRPQEMRIMKWKTLCTPAAVPLTSEYFPSKKQFETEYERKPYIVSQAFDDDMLEEPR
SRDELLREMVSLRFTQGFQIVVGPAVAKALGQKQVKIADIFSQDQMMEDGTSIFMSVGNI
IHQLSCVNGTEVEVNIFIRKTLHNAQDPDEIPKYRPAIRTLLDAGYQTSELPLVSRRPRP
NWNYIDAFVAGHNEELRDYLNFWRARFVLIPMTGRRSSIPGVRAGDNEEEIRIEGIRKLA
QIWQKYRYIPPNERRLQSSTTREKKKEMSPLDIVYKTEDPSVVIAAELETLPLLEGQEGQ
RERLVRSRELFSKKNFSLAALAEAIQQPVENGGVRMQNRRWHWRLHYNCFIGSDMTTWLL
ENFEDLEDREEAEALGNRLMVDEKGNGLFVHVERRHPFRDGQYFYQITSEYAKTHAQSWF
NTKKSQGSVPSTPMGDHIPRDSRANYSRPTSIHEEKLSSSGSTTPTAPSTAMGKKPKVTL
SKVIKYDVDHRKRSYRPEIIELHYDRLHNPDNCYHIRVDWINVTAKLVEDAIEHWAREAA
QYGLKLVEVPIAEACAVSDTNPFRRPYIIKLAVPPPDQSPLTYYDPTSFTPQAQPGRHFY
QKAILRKFDFVLDMEAASNFPSNVEVTYSWGKPDFKYTQYIHRSGSVLAEITDEGDLLLL
ANRLYSNRAAAARERELQREQRGETGLSGGGGLGTPGPSAMRVVTPGSFTPFSMLNSPAA
FHESSTPASSPLLKPSSGRLSPVSRAGGPVSTQVGKTVMSTSTTAATAPGYSHYPGTSWT
TWTTQEPEWIKDELEAFCRDAQALEEFYRELSTAVPPTAVPNATEEEMTPPSFNQSGSVV
STVPEGSIPALGLPPSVLSSSTGLAAGAGAGAVSAGVTLPSSVGGQQNTGASVTSATSAG
NIVLPSSRAGSPNPALMSASNFLRRGSVQYETLLGGLRGITGAVGRMWLELHDDGLLTFE
LPIQSFDYNAYENRKVAFKEARSTSCLNLFPITRSKSEPPRTQWQAGNELEKQPVILDGP
SASRPSDASSAKEQDAVVEDSRPDTGIASTSHLQPNESQDSATASATEFQGTLRQRNSAL
EHSQETGAAGEGRQGNPEEEKKTKTLFKHIEPKEPFTVRNQLQRTFLNSWLNILLLAAPV
GIAINYVHSVSRIAVFVVNFIAIIPLAAMLGFATEEIALRTGETLGGLLNATFGNAVELI
VAIIALAHDEVIIVQTSLIGSILSNLLLVLGLCFFFGGIRRQEQYFNTTVAQTAASLLAL
AVASVIVPTVFDIASDTPQSDIAKLSRGTSVILLIVYGGYLFFQLKTHSKVFAEESQKVE
AKPFKRNLLGSNDSANGPESAIARGLMSPAGMIMVGHGGQPSEAERLRRLLANPPRKNLR
DCAEGVAAAQPSRTEFGAVDENDSEEPQLQFGVAVATLTVSTVVIALCAEYMVDSISSVT
SGGRVSAEFVGLILLPIVGNAAEHATAVTVAMKDKMDLAIGVAVGSSMQVALFIIPLLVI
IGWGMGVDAMALNFDPFQVAVMFVSVLLVNYLIADGKSHWLEGMLLICLYAIIAVCSWWY
PAHDSLGPHSG
NT seq
7236 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccacacgcaatgccccttctgccgcgctggcaccagcgagaggccccaatgtt
cccagcaatgtccattctgcagtccgccaatattgtgccaccgattgccacttctcggac
tctcctagtgatgcgttatctagcagctccatgttctttgagccgcgctcaccccattcc
cgtcaacctgagcgacgatggacggtgactatcaacgattcatttattcatgacgatgtg
cttttgaaccttgatctcatcgggcctgatgtcaaacctggaagtgttgtggcgcttgat
ttggtcaaggctgattccgaaaagccgccaccaatctcgtcgtatgggagacagccagtc
ctggatcgcaaggagggaacttctggtcctgcctcagagaggcgctacatatgtgttgtc
aaggatatgcccagggagatgaaggctcgcttccctatggttgaggtatatgtggcgaag
catattgccgacgcctttggaatgaaaaagggcacccaggtgaccatctcacccatagat
gaaagcaatcctgctgtggaggcatcccatgtcgagctgtgcttcaaagatcaatacctc
tcgcgggctgatatgtggcgcatgacggtaggagagctggcaagaaggacagtttacaag
ggacagatgattttattcatgggcaccgtaaaggcccaggtcacttctgtctacgttgat
ggccgcaaagtccagtcagcattcttcggacgtaacacaaagcccatcttccgaagcgaa
tccgcccgttatgtgctcttcatccaaatggcccgtgaaatgtgggattttgaccctgat
ggctcgggcgagatcatgttcaacaaggttgttaatggcttcttgccggcattatttaag
aaatgggccacattgagggtgaaacatcttgtcaccatcgtcctctttgcccgcgtcgag
tatgacatgggtatatccactgagttggcaggcacatctgtttatgatgactatttcacc
gggttccaaacttcaggagatcgtcgtccatacaaggatttttaccgtgttgtggtcagc
gagatgagcagcggcgaatggaccaaaattctctatcagctcaagcgtgaattcaaccac
ttccgcaaagacatcagcacatatcaccagcaagcgatgagggagtttgcaggtgcagac
atgtccaacgaaagagatgccatgctaaacaaaatcaaggcagaagcttcgagggccatc
catggcaatttcttagaagccatcaacatggcgttgtctttatattcccacgactacatt
gacagagacttgacaagaactgggctgtctgtggtcatcatcagtcccagccctggcgtt
ttcgaagttgatccggagacgacttcccaatacgatgtcggatactcttgctttcctctc
aaggctgttttggagaaccgtgttgggagctatcgtttagacagcgagggaaacgtcgtt
gtcaagaatttacgggttccagatagcctattcgaccctgtccatggctttcagaagttt
gctcctgataagcatggaaagcactcggagaggtcgttgtggaggcagttacaagagtac
gatgattgcaaagcacgattgcctcctcgacaaatcggcgctggccattccaggcatgga
agagacctagaggctatgccgagcaggcaacacgcagaggattccacttctgtaagcata
ttggggacgtcgtatacagagcggcgaccgtcaactgcgacccaacagcatcaggtgttt
tccgagggtattacttgttactccagtgcggagaaagccgaagtcgtgcagtcccaccgc
aagagcatcagtggccgatctatgagacaggaaccgagagagacgtcttcctcgtcttct
ctcgcaaagacaccgaaactgatgcgcatcagccttggcaaccgtgggtttggaattgca
gctcccaaggtagcaaccgccgaagtgagcattgagactgtcggtgcttccaagactttg
acatcatctcgaagcaaccaagacctccggatgatcccgcaacggataggacagcggcaa
tcgtcgtcccgtaggtcgtccatagtcggaacgcctacaagcacattctctcatggcagc
ctcgggtcattttcgttggcccagggccagcagcccgcgccagatacgccgtcgaagcca
atagtcatcagaaaaaaccagcaagctagtgaaccggcagctgccatgttatctggttcg
attcttgcgacgactcttcgaccggagccaggtggccgagaccgcgacctgtactattcg
aacgcaacaagggccgaagatgccaaaaaactctacaattccaaactccttgctggagcc
gtgccggtgccatcgaatctgtcaccaaaaaccgcattatcgccgtggctgaccttgcta
aacccttctaatccgaaccctaatgacttggagatcccccagctctacagccgctggcag
cacgtcttccctcgtcctcaggaaatgaggatcatgaaatggaagactctgtgcactcca
gctgccgtgccccttacttcagagtattttccgtccaaaaaacaattcgagactgagtat
gaacggaagccttacattgtctctcaagctttcgatgatgatatgctagaagagcccaga
tctcgtgatgagctgctgcgtgagatggtcagtctacgcttcacacaaggttttcagatc
gttgttggccctgccgtcgccaaagcactaggccagaaacaggtcaagatcgccgatatc
ttctctcaagaccagatgatggaagatggtaccagcattttcatgtccgttggcaatatt
atccatcagttatcctgtgtcaacggcactgaggtcgaagtcaacatttttattcgaaag
actctccataatgcacaagaccctgatgagatccccaagtacagaccggctataaggaca
ttgttggacgccggataccagacaagcgagctcccgcttgtgtctcgcagaccacgtcca
aactggaactacatcgacgcctttgttgctgggcataacgaagaacttagggattacctc
aatttctggcgcgccagatttgttttgattcctatgaccggtcggcgctcgtcgatccct
ggggtgcgggctggcgacaatgaggaagaaatccgcatcgaaggaattaggaaactggcg
caaatatggcagaaatatcgatacattccccccaatgagcgtcgtcttcagagttcaaca
actcgcgaaaagaagaaagagatgagccctcttgatattgtctacaagacagaagaccca
tcggttgtcatcgcagcagagctggagacgcttcctctcttggagggccaagaaggccaa
cgggaaaggctggtgaggagtcgagaattattctcgaagaagaattttagtctggcagcg
cttgctgaggctatccaacaacctgttgaaaacggaggcgtgcggatgcagaaccgcagg
tggcactggcgactgcattacaactgctttattggatcggatatgacaacatggcttctg
gaaaactttgaggatttggaagatcgtgaagaggccgaagctctgggcaatcgtctcatg
gtggatgaaaaagggaatggcctcttcgtccatgtggaacggcgacatccattcagagat
gggcaatatttctatcagattacgagcgagtatgcgaagactcatgctcagagttggttt
aacaccaagaaaagccagggatcggtgccgtccacgccaatgggtgaccatatcccacga
gattctcgagccaattattctcgaccaacgtcaatacatgaagaaaagttatcttcatct
ggttcgacaacaccgacagcaccatccacagcgatggggaaaaagccgaaggtgacacta
agcaaggtcatcaagtatgacgtggatcacagaaagcgttcctatcggcctgagatcatc
gagctgcactatgacaggctgcacaacccggataactgctatcacattcgagttgactgg
atcaatgttactgccaaacttgtcgaggatgctattgagcactgggcacgtgaagcagct
caatatggattaaagctggtagaagtaccgattgctgaggcatgtgcagtcagcgacaca
aacccattccgaagaccatacatcatcaagcttgcagttcctcctccggaccaatccccg
ctaacctactatgatccgacgtcattcactccacaagcgcagcctgggcgtcatttctac
caaaaggctatcttgcgcaagtttgattttgttttggacatggaagcggcttccaatttc
cccagcaacgtcgaggtcacctattcgtgggggaaacctgacttcaagtatacgcaatat
atccatcgctctggatctgtcttagcagaaatcacagatgaaggagacttgttacttctg
gcaaacaggctgtatagcaaccgagcagctgcggcacgcgaacgagaacttcagcgcgaa
cagcgcggtgagactgggctcagtggcggaggggggctcggtactccgggtccgagtgcg
atgcgtgttgtcacacctggctcgttcacaccattcagcatgttaaattcaccggcagca
ttccatgagtcatcaactcctgcttcctcaccgctcttgaaaccatccagtggccgtcta
tctcctgtctcacgggctggtgggccggtaagcacacaggttggcaaaacagttatgtct
acttcaacaacagctgctacagcccctggttatagccattatcccggcacctcgtggacg
acctggaccacacaagaaccggagtggatcaaagacgaacttgaggcattctgccgcgac
gcgcaggcgctggaggagttctacagggagctcagcactgccgtaccgccaacggcagta
ccaaatgccaccgaagaagaaatgacgccaccttcattcaaccaatctggcagcgtcgtg
tcgacagtgccagagggcagcatcccggccttgggattgccaccgtcagtgctgagttct
tcgacaggactggctgctggtgctggtgctggtgctgtatctgctggggtgactttgcct
tcgtctgtcggagggcagcagaacaccggtgctagtgttacttcggcaacctctgctggg
aacatagttctgccaagctccagggcagggagccccaaccccgcgctgatgtcagcttca
aactttttgagaagaggaagtgtacagtacgagaccctccttggaggcttgagggggatc
acaggagctgtaggtcgcatgtggcttgagctgcatgacgatggccttttgaccttcgaa
ttgcccatccagagcttcgactacaatgcctatgaaaacaggaaggttgcgttcaaggaa
gcccgaagcacctcatgtctgaatctcttccctatcactcggagcaagagcgaacctcct
cggacacaatggcaagctggcaacgagcttgagaagcagcctgtcattttggatggacca
agcgcctcacgcccctcagatgcgtctagcgccaaggagcaagacgcggtcgtcgaagac
agccgacctgacactggaattgcctcaacctcacatctccagccaaacgagagccaagac
tcagccactgcctcggcaacagaattccagggcacgctacgtcagcgaaactctgctctc
gaacactcgcaggagactggcgcagcaggagaaggccggcaagggaaccctgaagaagag
aagaagacgaagactttgttcaagcacatcgaacccaaagagccgttcactgtacgcaac
cagctgcaacggactttcttgaattcctggctcaatatcctcctacttgccgctcctgtg
ggcattgcgatcaactatgtccattcggtgagccgaattgctgtttttgttgtcaacttc
atcgcgattattccccttgctgccatgcttggcttcgccacagaagagatcgctctgcgg
acaggtgagacgttgggaggattgttaaatgccaccttcggcaacgctgttgagctgatt
gttgccatcattgccttggctcatgatgaagtcatcattgtccagacttcacttatcggc
agcatcctctccaaccttttgcttgtgttggggctgtgctttttctttgggggcatccgg
cgccaggagcaatactttaacaccacagtcgcccaaacagccgcaagtttgcttgctcta
gccgttgcgtcggtcattgtcccaacggtcttcgacattgccagcgataccccgcaatcc
gacattgctaaactctctcgcggcacgtccgtcattttactcattgtctatggcgggtat
cttttcttccagctcaagacacactccaaagtcttcgccgaagaaagccaaaaggtcgag
gccaaaccattcaaacgcaatcttcttggaagtaacgatagtgccaacggccctgaatct
gcaattgcccggggtctgatgagccctgctggcatgatcatggtcggtcacgggggccag
ccatctgaagccgaacgtctgcgccgcctgcttgccaaccctccacggaaaaacctccga
gactgtgctgagggtgtcgcggcagcccaaccaagccgaacagaatttggtgctgttgac
gaaaatgacagtgaagagcctcagcttcagtttggtgtcgctgtggccactcttaccgtc
tcgactgtcgtaattgcattatgtgccgagtacatggtggacagcatcagttccgtgaca
tctggcggccgcgtgagcgccgaatttgtcggtctgattttgttgcccattgtgggcaac
gcggccgagcatgcaacagccgttacggtggccatgaaagacaagatggacctggccatc
ggtgttgcagtcgggtccagcatgcaggtcgctctcttcatcatcccattgcttgttatt
atcggttgggggatgggagttgatgcgatggcgctgaactttgacccattccaggttgct
gtcatgttcgtgtcggtactattggtaaactacctgatcgctgatggcaagagtcactgg
cttgagggcatgttgctgatttgtctgtatgctattattgctgtctgctcatggtggtat
cctgcacatgactctctggggccgcacagtggctag
DBGET
integrated database retrieval system
