Thermochaetoides thermophila: CTHT_0033710
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Entry
CTHT_0033710 CDS
T03100
Name
(RefSeq) RNA recognition motif-containing protein
KO
K13192
RNA-binding protein 26
Organism
cthr
Thermochaetoides thermophila
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cthr01009
]
CTHT_0033710
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cthr03019
]
CTHT_0033710
03041 Spliceosome [BR:
cthr03041
]
CTHT_0033710
Protein phosphatases and associated proteins [BR:
cthr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
CTHT_0033710
Messenger RNA biogenesis [BR:
cthr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
CTHT_0033710
Spliceosome [BR:
cthr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
CTHT_0033710
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
PWI
zf-CCCH
Nup35_RRM_2
zf_CCCH_4
RRM_PARP14_3
Mis12
zf-CCCH_2
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
18257409
NCBI-ProteinID:
XP_006693808
UniProt:
G0S5V0
LinkDB
All DBs
Position
Unknown
AA seq
837 aa
AA seq
DB search
MLFPEEHAPHLKNWIVKRLENTSDADSDVLADYVLALLRHDGDVNDVRKLCETEIPDFLK
EDPAAFVNDVFEAISYRSYLPGAPPPPSKSVPAPAPPPASQPPDALYYDDTPMPSAPTYQ
PAPIHTGSRKRAYNDWDDPNNQPGRDGSEFVSRSFKYQKRGGAYGGRGGRSDDSNGYRVP
NPSNMPTFPPPGQPPLQSTPPAPSSVGYFDTSGAMNSMFGMNLGVANSMTGFMPGSWGQQ
QPHKKRAKCRDWERKGYCQRGANCMFEHSNDPVYPTPMFGSIPPAPQPAAVEEYDPKNAL
MSGFSNGFHSLLGRQTQGLDSDHPKYKAGKNQNRQKRGDKAPFSADGPVFDRTKSTIVVE
NIPEENFTEDQVRSFFSQFGKVLEISMQPYKRLAIIKYDSWSSANAAYQSPKVIFDNRFV
KVFWYKDDDSTLPPSMSLPGSAPVNRSHSTNGASSVGSQAPMGQSPVDLEEFARKQEEKQ
KAFEEKQRKRAELDRQKEELERRQRELLEEKAKLEAKLSRRDSVRSSQAGESVNGDDSKS
SSKPTSQTEALRAQLAALEAEARQMGLDPDSIVESPASWPAARGGYGSYGRGRGRGPWRG
YSYSPRGASRGLFRGRVNLHAAYAAYSIDNRPKKVVLTGVDFTASDKDETLRQYLFGIGE
FTDIQTTPTSAEITFKDRKTAEKFFNSVLFNGKEIPGIETPVELAWGTNNGSTGSVPTTP
GNTAANLTTPTATSAGGLANHASSSSAGVSNMTSGVGVKNTTQAADVSDNMSAEPATTAA
TTAGSVSGGEGEDAGASSSDKDVHILLDRPPTDRMHDRERDQNEMDYEVADENQWGY
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgcttttccccgaagagcacgctcctcatctgaaaaattggatcgtcaagcggctcgag
aacacatctgacgctgactctgatgtgctggccgattatgtgctcgccctcctccggcac
gatggcgatgtgaatgatgtgcgcaagctctgtgagaccgagattccagactttctaaag
gaagaccccgctgccttcgtcaacgatgtgttcgaggccatttcataccgttcctacctc
cccggtgcccctccccctccttcgaagtctgtgcccgcgccagctcctccgcctgcttcc
cagccgcctgatgccctctactacgatgatactcccatgccgagcgcaccgacctaccaa
cctgcccctatccacaccgggtcaagaaagcgtgcttacaacgactgggacgaccccaac
aaccaacctgggagagatgggagtgaatttgtgtcgaggagctttaaatatcagaaaaga
ggaggtgcatatggtggccgaggaggcaggtcggacgactcaaacggctatagggtgccc
aatccatcgaacatgcccacctttcctccgccgggacaacccccccttcaaagtacccct
cctgcgccctcaagtgtcgggtatttcgatactagcggggcaatgaactcgatgtttgga
atgaaccttggtgtcgcaaactcaatgacgggctttatgccgggaagctggggccagcag
caacctcataagaaaagggccaagtgccgtgactgggaacgcaaagggtattgccagcgc
ggtgccaactgcatgtttgagcacagcaacgacccggtgtatcccacacctatgttcggt
tccatcccacccgcgccacaaccagctgccgtcgaagagtacgatcccaagaacgcactt
atgtctggattctcgaatggcttccactcgctcttgggtcgtcaaacacaaggcttggac
tccgatcatccgaaatataaggctggaaagaaccagaaccgacagaaacggggcgacaag
gccccgttttcagctgatggtcctgtctttgacaggacaaagtctactatcgttgtagag
aatatcccggaggagaacttcaccgaggaccaagttaggagctttttctcacagtttggc
aaggtgctggagatatccatgcaaccatacaagcgcttggccatcatcaagtatgacagt
tggagctcagccaatgccgcctaccagtctccgaaggtcatttttgataatcgtttcgtc
aaggttttctggtacaaggacgacgactctaccttgccgccatcaatgtccctccctgga
agcgctcccgtcaacagatcccacagcactaatggtgcttcgtctgtcggatctcaggct
cctatgggccagtctccggttgatcttgaggagttcgcacggaagcaggaagagaagcag
aaggcgttcgaggagaagcagcggaagcgggcagagcttgaccgtcaaaaagaagagctt
gaaagacgacaacgagagctcctcgaagaaaaggcgaagttagaagctaagctttcgcgg
cgggacagcgtcaggtcgagtcaagctggagagagcgtcaatggagatgattccaagtcc
tcatcaaagcccacaagccaaacagaagcgctgcgtgcacagctggctgctctcgaggcc
gaagccaggcagatgggtcttgatccagactcgattgttgaaagccctgcctcctggcct
gccgctagaggcgggtatggttcttatggccgcggcaggggtagaggcccttggcgtggt
tactcttactcccctcgcggagcttccaggggattattccggggtcgtgttaaccttcat
gctgcctatgctgcatactcgattgataaccggcctaagaaagtggttctcactggtgta
gatttcactgcgtccgataaggatgagactttgaggcagtaccttttcggcatcggcgag
tttaccgacatccagactaccccgacctcagctgagatcaccttcaaagaccgcaagacc
gccgagaaattctttaacagtgttcttttcaacggcaaagagatccccggcatcgaaacc
cccgtcgagctggcctggggcaccaacaacggctctacgggttccgtgcctactactcca
ggcaacactgctgccaatctaaccacacccacagcgacatccgctggcggccttgccaat
cacgcctcttcctcttcagccggcgtgtcgaacatgacaagcggcgtaggcgtaaagaac
acgacccaagctgctgatgtaagcgacaatatgagcgctgagcctgcgactactgctgct
accaccgctggcagtgtcagcgggggagagggtgaagacgcaggagcaagtagcagcgat
aaggacgtgcacatcctgctcgataggccaccgaccgaccgcatgcacgacagggagcgt
gaccagaacgagatggattatgaagtagcggatgagaatcaatgggggtactga
DBGET
integrated database retrieval system
