Thermochaetoides thermophila: CTHT_0034200
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Entry
CTHT_0034200 CDS
T03100
Name
(RefSeq) DNA mismatch repair protein pms1-like protein
KO
K10858
DNA mismatch repair protein PMS2
Organism
cthr
Thermochaetoides thermophila
Pathway
cthr03430
Mismatch repair
cthr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CTHT_0034200
03460 Fanconi anemia pathway
CTHT_0034200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cthr03400
]
CTHT_0034200
DNA repair and recombination proteins [BR:
cthr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
CTHT_0034200
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
18257458
NCBI-ProteinID:
XP_006693855
UniProt:
G0S651
LinkDB
All DBs
Position
Unknown
AA seq
1018 aa
AA seq
DB search
MASSATIKAIDSNTIHQIQSGQVIVDLCSVAKELVENSIDAGATAIEVRFKNQGLDSIEV
QDNGSGIAPHNYETVALKHYTSKLSSYDDLETLQTFGFRGEALSSLCALSRLSIVTCTQE
QAPRAARLEFEPSGKLKSTTVVSGQRGTTVIVEDLFRSLPVRRRELERNIKREWGKVINL
LNQYACIQTGVKFTVTQQPTKGKRMVMFSTKGNSTTRENIINVFGVKTMNALVPMDLTLE
LIPTAGPLTKGKARTDRKSTEVRVVGHISRPTHGEGRSTPDRQMFYVNGRPCGLPQFAKV
FNEVYRLYNSSQSPFIFADIQLDTHLYDVNVSPDKRTILLHDQGQMLDNLRESLIELFET
QDVIIPMSRVAALKQTSSKISTARPSPSTSPQETGSKSAAADSRLSKATTSFRAMENTGD
NANEESANTEDNVDDVEKEDTRPRQQPKMHFRHSKPQAQFKGFTTLSNWLRNELPRPSHT
SSPLSEEQATEASTRDKGMSSSVTSAGDRGDRIPQSQVTGDTNVRDDERSLLPDVGKDDE
IAPNEPESPIRALCPPSQPPTLRMSSTPSKPLKRATQEMATITIGDHTVRSAIGNPSKKP
RVDEPAKPVVKTGVLKGGMRSTQLPSFGIRLSQLFSASTQPEGDLELIEDAGKGIEEHEV
IEEKKGEEGREEDDGHDSSDDDADGLFVSQDGNKDAEDEGSGEGQPEEILKPMETDQPQS
MSDADVPMESLGTHLASCDQEHGDNDFEYVDEEEKVARENQKVQAMIQEAEIATAESTEE
TEKRSETFVKGRPKRKDMTCNLVQRVKANCSEIRRRIEYLSSRLPQEACQTTAGVRLESI
ESEDAEAKLSLKISKSDFTKMRIVGQFNLGFILAVREAVSASSSTSCSRDSGTKDDDELF
IIDQHASDEKYNFERLQATTTVQSQRLVQPKTLSLTALEEEIILANLPALERNGFSVSVD
TSGASPVGSRIQLLTLPLSRETTFSIADLEELIFLLADNPTSNATTVPRPSKADGKGS
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaagtgcgaccatcaaagcaattgactccaacactatccatcaaatccagtct
ggccaggtcatagtcgatctctgctcggttgccaaagagctggtcgaaaatagcatcgat
gctggtgctacagccattgaggtgcgattcaaaaaccagggactggattccatagaggtc
caggacaatggctccggcatcgctccccacaactacgaaactgtggccctgaagcactac
acatccaagctctccagttatgatgacttggagacgcttcaaacattcggctttcgaggc
gaagccttgtcctctttatgtgcattgtcccgactctccatcgtgacgtgtacccaagag
caggctccacgtgctgcgcgattggagtttgagccgtctggaaaactcaagtctaccacc
gtcgtgtcgggtcaacggggcaccacagttatcgtggaggatctcttccgaagccttcct
gtccgccgtcgtgaactggagaggaacatcaagagagaatggggcaaggtaatcaacttg
ttgaaccagtatgcctgcatccagaccggggtgaaattcactgtcacgcagcagcctact
aagggcaagcgtatggtgatgttttcgacaaaaggaaactcaactaccagggagaacatt
atcaatgtttttggcgtgaagaccatgaatgccctggttcctatggatcttacgttagag
ttgatccctactgctgggcctctaaccaaaggcaaggcgagaacggacagaaagtcaaca
gaagttcgcgtggtcggccatatatctcgtcctacccacggtgaaggccgctcaactcct
gaccggcagatgttctatgtcaacggccgcccgtgtggtttgccccaatttgccaaagtt
ttcaacgaggtctaccgtttgtacaactcttcgcagtccccgtttatctttgctgatatt
cagctcgatactcatctttacgatgtcaacgtcagtcctgataagagaaccatccttctc
catgatcagggacaaatgttggataatctgagagaatctttgattgagcttttcgagacc
caggacgtcatcatcccgatgtctcgcgttgctgcgctgaagcaaacatcttcgaagatt
tccacagcacgcccatctccctcaacttccccccaggaaacggggtcaaagtctgccgcc
gcagattcccggctctcgaaagccacgacttcatttagggccatggagaatactggagac
aatgccaacgaggaaagcgctaacacagaagataatgttgacgacgttgagaaagaagat
acgagacctcgacaacagccgaagatgcacttccgccattccaagccacaagcccaattc
aagggattcacaactctatcaaactggctacgaaatgagttgccgagaccgtctcacact
tcgagcccgttatccgaagaacaggcgaccgaagcctctactcgggataaaggcatgtcg
agctctgtaacctcggccggcgacagaggagatcgaatacctcaatctcaagtgacgggt
gacaccaatgtacgagacgatgagcgatctctgttgccagacgttggtaaggatgatgag
attgctccaaacgagcctgaatctccaattcgtgctctttgccctccttcccaaccaccg
actttgagaatgagctcaactccttccaagccgttgaagcgtgcaacgcaagagatggca
accatcacaataggcgaccatactgtgagaagtgccattggaaacccatcgaaaaaacca
agggtagatgaaccggctaagccagtggtgaagactggtgtgctcaaaggtggcatgcgc
agcacacagttaccatcctttggaatacgactctcccagctattttcggcttcaacacaa
cctgagggagacctcgagctgattgaggatgcaggaaaggggattgaagagcatgaggtg
attgaagaaaagaaaggagaggaaggccgggaggaagatgatggacacgacagttccgat
gatgacgctgacggtttgtttgtctctcaagacggtaacaaagatgctgaagatgaggga
agcggtgaagggcaacctgaggaaatactcaagccaatggagactgatcagccacagtct
atgagtgacgcagacgttccaatggagtcacttgggacgcatctagcttcctgcgatcaa
gaacatggggacaatgacttcgagtatgttgacgaagaggagaaggtggctcgcgagaac
caaaaggtgcaggcaatgatacaggaagccgagatcgcaacagccgagtcgactgaagag
acggagaagcgttctgagacctttgtaaaggggcggccaaaacgaaaagacatgacttgc
aaccttgtacaaagggtaaaggccaattgttccgagatacggcgtcgcattgaatatctc
tccagccggttgccacaagaggcgtgccaaacaacagcgggggtaaggctggaaagcata
gaatcagaagatgctgaagcgaagttatcgctcaagatctcgaagtccgactttacaaag
atgcgcatagtgggacagttcaatcttggctttattcttgccgtccgcgaagctgtttct
gcttcctcgtccaccagctgtagccgcgactcgggcaccaaggacgacgacgagctcttc
atcatcgaccagcatgcatctgatgagaaatacaacttcgagcgccttcaagcaaccacg
acagtacagtcacagcgcctagtccaacctaaaactctcagcttgacagctctagaggaa
gaaataattctggctaatctccccgcccttgaaagaaatggcttctctgtctcggtagac
acatctggcgcgtcccctgtcggctcgcgcatccagctcctgacgctccctctctctcgt
gagacaacattcagtatcgccgatctcgaagagctcattttcctcctggcagacaacccg
acttcaaatgccacgacggtgccacggccgagcaaggcagatggaaaaggtagttag
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integrated database retrieval system
