Thermochaetoides thermophila: CTHT_0036270
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Entry
CTHT_0036270 CDS
T03100
Name
(RefSeq) putative nuclear pore complex protein
KO
K14312
nuclear pore complex protein Nup155
Organism
cthr
Thermochaetoides thermophila
Pathway
cthr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CTHT_0036270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cthr03019
]
CTHT_0036270
Messenger RNA biogenesis [BR:
cthr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CTHT_0036270
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
18257665
NCBI-ProteinID:
XP_006694056
UniProt:
G0S7B6
Structure
PDB
PDBj
LinkDB
All DBs
Position
Unknown
AA seq
1416 aa
AA seq
DB search
MEPMTPMRPIPGAYVNTPAPPTANPARRRLFTEASSSGAAATTQLGAAPAPLASTMAPGP
EINSGLMTPQAREDLPPVAKAAQVVNQTLQLDDSYPDLDSYCRPGASSDYEMQSSDSSWA
PFHVVRHHNIPDKVFEHLNAGEVFTKLGLFAEIGYAWASIDSSLFLWDYTHPNPELIGYE
EATHTITAVALVPPKPGVFVKTITHVLVVATTSEIILLGVSATPTPSGSKSLTLYSTRMS
VHRGGSDVSFIVGTKDGRIFLGGESDTDIHEIFYQQEERWFSSRCGKINHSHPGWSAVVP
SLAGLPFGSRQQEWLRGLYVDDTRNLLYSLSNRSTIRTYHMEGPEKLTKVIEKDKTSCLR
DFAHMADSSPLFTDKTNIVALSPIPATEASKLHLMALTDTGCRLFLSATSSASYTMGGAT
SLAPQSMQLQFVKFPPRESPTRIRTLNGQIIDSQLDKTSRALDPSALGFRFSPGYFFDVV
RKHPNQDMLFVSAPDTGRIKVTQPASALKYFEQGTWIELENGNRTIEIGLTTAPFAAAKQ
PLGFGNELAVQFDQVPGEFAVLTNTGVHIVRRRRLVDIFAKALGNCVSASDDALEREVRK
FINQYGRVETIAAALAVACGQGSDLRTGTGRGMDRNTENLARAAFIEYGGQPRLAESDGK
QSVSESVRLSSRHDALALYLTRLVRTLWKAKVVQVGSGSDISSTIPTSKLVTIQENVERL
RNFLEANKSTIQGLAPPSERLFGRQEDIANQKEHQALHALQKLMESISEGISFVLMLFDE
RVSDIYARLDAVSQQQLKDLTYEQLFSQTPGKELAKVLVKAIVNRNIASGANVETVADAL
RRRCGSFCSPDDVVTFKAQEQLQRASEQAHNSPVLRALLAESLRLFEQVAGSLTPANLTT
AVEQYISLKYYAGAIQLCLTVAQQKDRGNTALSWVNDGKPANDSRKKAFDERKICYNLIH
QVLDKLESDFAGEPELVDGRPTLAATKRMEAYNVVNDSSDEVFHFDLYEWYIEKGWTDRI
LSIDSPHVITYLQRLAETDFRHAELLCRFYTTRSRFFEAAQVQTNLAKSDLNISLKDRII
LLSRAKGNASVNTIGISRQQQQQLNHEASELLEIAHIQDDLLERLVADPRIPEERKAEIE
EFLDGPIRTLTDLFNDYADQANYYDLCLLIFHAADFHNPRTILDTWNNLINQSHFEAEQR
REYWEIVQAGGDLPAGVIAPIAEPPLPYVYVSQQIQLIAHRTSLDSLIFPVNSLLPVVCA
YAINNGQDASIGADPCWPIQLFLNLGVPHALVVQVLENVLDTQEAPFTGRRRKLVVQWIA
MAVDMWVREVERRGAMAAAAASGASGSEAVMGSWVSELLGRADQVLTQIAGTGATLRGGA
ASDAEEIASLRRTVKGLKRSVDMLLGGEMARMSFFR
NT seq
4251 nt
NT seq
+upstream
nt +downstream
nt
atggagccaatgacgccgatgcgccccattccgggcgcatatgtcaacacgccagccccc
ccgacagcgaaccctgcgcgtagacgtctatttactgaggcgtcctcctccggcgctgct
gcgacgacgcagcttggggctgctcccgcgccgctggcgagcacaatggctcccggcccc
gagatcaacagcggcctgatgacaccacaggctcgcgaagacctccctccagtcgcaaag
gctgcccaagtcgttaaccagaccttgcaactcgacgatagctatcctgacctggactct
tactgcaggcctggcgcatcgtccgactatgagatgcagtcgtccgattcatcatgggcc
ccattccatgtagtgcgtcaccacaacatcccagacaaagtgtttgagcatcttaatgca
ggcgaagtcttcacgaagctgggcttgttcgctgagattggctatgcatgggcttcgatc
gacagctccctctttctttgggactacacccatcccaacccggagctgatcgggtatgag
gaggcaacacacaccattactgctgttgcgcttgtgccgccgaaaccgggggttttcgtc
aagactatcacgcatgtccttgttgtcgctactacctccgaaatcatcctccttggtgtc
tctgccacgcctaccccttcgggttcgaagtcgcttacgctctattcgaccaggatgtcg
gtccaccgtggaggtagcgacgttagcttcattgtcggtactaaggacggccgcattttt
ctcggtggtgaaagcgacaccgatattcatgaaattttttaccagcaggaagagaggtgg
ttctccagccgatgcggcaagatcaatcactctcaccctggctggtctgcggtcgtcccc
agcttggctggcttgccatttggctcccggcagcaggagtggcttcggggtctctatgtt
gacgacactcgaaaccttctttactcgctctccaaccggtcgactattcggacataccat
atggaaggtccggagaagctcaccaaggttattgagaaggacaagaccagctgcctgcgc
gactttgcacatatggctgatagctccccgcttttcactgacaagacgaatatcgtggcc
ctgagccctatcccagcgaccgaggcgtccaagcttcatcttatggctcttaccgacacc
ggctgccggctcttcctgagcgcaaccagctctgcttcgtataccatgggtggtgccacc
agcttggctcctcaaagcatgcagcttcagtttgtcaagttccctccgagggagtcgcca
actcgcattcggacccttaacggccagattatcgacagtcagcttgacaagacctcgcga
gcccttgaccccagcgcactcggtttcagattctcccctggatatttcttcgatgttgtc
cgcaagcatcccaatcaggatatgctttttgtctcagcgccggatactggccggatcaag
gtcactcagcctgcgtctgcgctcaagtatttcgaacagggcacttggattgagctggag
aatgggaatcgtaccattgagattggcctgacgaccgcccccttcgctgccgcaaagcaa
cctcttggcttcggcaacgagctagccgttcagttcgaccaggttcccggagagtttgct
gtgctcactaacactggcgtgcacattgttcgtcggaggagactggtcgatattttcgcc
aaggctctcggcaactgtgtcagtgctagtgacgacgcgcttgaaagagaagtgcgtaag
tttatcaaccagtatggccgtgttgagactattgctgctgcgttggccgttgcttgcggc
cagggatctgatctgaggaccggaactggccgtggcatggatcggaataccgaaaacctg
gctcgggctgccttcatcgagtatggtggtcagcccaggctcgcagaatcagatggcaag
caatctgtctctgagtctgtcaggttgtcgtcgcggcacgatgccctagcgctttacctc
acgcgtcttgtccggacgttgtggaaggcgaaggtcgtccaggttggctcgggttcagat
atctcttctactattccgacttcgaagcttgtgacgatacaagaaaatgttgagcgcctg
cgcaacttccttgaagccaacaagagcaccattcaaggccttgctcctccttctgagcgt
ctctttggtcgccaagaggacatcgccaaccagaaggagcatcaggcgctgcatgccctc
cagaaactcatggaaagcatctcggaaggcatttcctttgttcttatgctgtttgacgag
cgcgtctcggatatctatgctcgcttggatgccgtttctcaacagcagcttaaggacttg
acatacgagcagctcttctctcagaccccaggcaaggagctagcaaaggtgctggtcaag
gcaattgttaaccgcaatattgctagcggcgccaatgttgagactgttgccgatgccttg
cgtcgtcgttgtggaagcttctgttctcctgatgatgtcgttacgttcaaggctcaggag
cagctgcaacgagctagcgaacaggctcacaactctcctgttctgcgtgccctgttggcc
gagagcttgcgcctgtttgagcaagtcgctggcagcttaactccggctaacctcacaacc
gctgtcgagcagtatatctcgctcaaatactatgctggcgccatccagttatgcctcacg
gttgcccaacagaaagatcggggcaatactgcgctttcatgggtgaacgatggcaagccc
gccaacgactcgcgcaagaaggcgttcgacgagcgcaagatttgctacaacctgattcac
caggtccttgataagctcgagagtgacttcgctggggagcccgagcttgtcgacggccgt
cccacacttgctgcaacaaagcgtatggaagcttacaatgtggtcaacgactcaagcgac
gaggttttccacttcgacctgtatgagtggtacattgaaaagggatggaccgaccggatt
ctttctatcgactcacctcatgtcatcacctatctccagcggctggctgagactgatttc
cgccatgctgaactcctttgccgcttctacactacccgcagccgcttcttcgaggccgcg
caagtgcagactaatttggccaagtccgacctgaacatcagcctcaaggaccgcatcatc
ctgctcagtcgcgccaagggcaatgctagcgttaataccattgggatcagccgtcagcaa
cagcagcagctgaatcatgaggcgtcggagcttctcgagatcgcccacatccaagacgat
ctccttgagaggcttgtggctgacccacgcatccccgaggagaggaaggcagaaattgag
gagtttctcgatgggcccatcagaacactcactgatctcttcaatgactacgccgatcag
gctaactactacgacctctgcctgctgatcttccacgctgccgacttccacaaccctcgt
accatcctcgacacttggaacaacctcatcaaccagtctcacttcgaagccgagcagagg
cgcgagtactgggagattgtgcaggccggtggcgacctccccgcgggcgtcatcgctcct
attgccgagccccctcttccttacgtctatgtttcgcagcagatccaactcatcgcccac
cgcacttctcttgacagcctaatattccctgtcaacagcttgcttcccgttgtctgcgct
tatgccatcaacaacggccaggatgcctctatcggtgccgatccctgctggccaatccag
ctcttccttaacttgggcgtgccgcatgccctcgtcgtgcaggttctggagaacgtcctg
gatacccaggaagctcccttcactggccgtcgtaggaagctggttgtccagtggattgcc
atggccgttgatatgtgggtcagagaggtcgagcgtcgcggtgccatggctgctgccgcc
gcaagcggtgcttctggcagcgaggcggtcatgggcagctgggtgagtgaattgttaggt
cgggcggaccaggtcctgactcaaatcgccggaaccggcgctacgcttaggggaggcgct
gcttctgatgcagaggagatcgcttcgctgaggaggacggtcaagggcttgaagaggagt
gtggatatgcttcttgggggggagatggctcgtatgagtttctttcggtga
DBGET
integrated database retrieval system
