Thermochaetoides thermophila: CTHT_0037990 Help Entry CTHT_0037990      CDS       T03100                                  Name (RefSeq) putative THO complex protein   KO K12879   THO complex subunit 2 Organism cthr  Thermochaetoides thermophila Pathway cthr03013   Nucleocytoplasmic transport cthr03040   Spliceosome Brite KEGG Orthology (KO) [BR:cthr00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     CTHT_0037990   09122 Translation    03013 Nucleocytoplasmic transport     CTHT_0037990  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cthr03019]     CTHT_0037990    03041 Spliceosome [BR:cthr03041]     CTHT_0037990 Messenger RNA biogenesis [BR:cthr03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      CTHT_0037990 Spliceosome [BR:cthr03041]  Complex C   Other components    EJC/TREX     CTHT_0037990  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     CTHT_0037990 SSDB OrthologParalogGFIT Motif Pfam:  THOC2_N Tho2 Thoc2 Ribosomal_60s Motif Other DBs NCBI-GeneID:  18257837 NCBI-ProteinID:  XP_006694221 UniProt:  G0S891 LinkDB All DBs Position Unknown AA seq 2651 aa AA seqDB search MPPKRKRNDRGPNDAGLSRPAPHRPGDMTLSQHERSFDGLRRGPPRNARRGDRRDSYTPN SSTNASAPVSPSLPRPPSSSSSMAAPPPPAPPQPPPAPAVTPAPATSTPAPASMPAPPPP SSSAPAAASTHIPYVYEYTIITDDHLSRWTKGARQEIIDHGIQSRDDEDLTEVAMIFQEL IHSVTDGRLPGAEAGGVVKEILGPEISEEDRKNGAFDPHTLFLDTVSTFVDVESGPLHPQ LRDFMMATEVSPALMRVVLDPEILQHLDLIRSTFVRMGIRNSTNLLYRQANYNLLREETE GFSKLVTELFTTSNSEPPSSEVVQATFNRVMGLIGTFDLHPGRVLDVTLDVFASVLIKQF RFFIKFLRISSWWPRSQLQMRTDVFTGGLPIWALPDHYGWTATEEEEAALEQQRLQRDIA FWDRARDLKLKAFFELGGRQLLPSDEERARSDVSDDDVSPENAIEREWIKITQTRPPPGN RDAAQMLGFKLRFYTSEFRNAEDTLPANLLYLIALLIKVGFISLTDLWHHIWPLDEDMER VKAQRFKELEEKEKANRPGGEKNALTMAGALPDDMPPPPSNNRREAEAKKEPETKKEEQA EEKPKLPEPNDQKVDLLRCLLTIGALPESLFIIGRHDWLLEGYPDIIPLFHRIIHHSIEK VYQETQPRATMSMDCGMKKLPDIDQSGVPKGSVKLTTPIVRRALRWPFPDKADVSDGPSY RFYWDEWADNVPVCQTVDDVFTLCDTLVNVIGVHIGQDASLVAKLAGIGCKSLADDPSPA NMNRWLDLLKRLLVPALSLSETNSSIVEAVWSLLKQYPIKTRYGVYAEWYEGQTSRLEPI RKAFHRTRLETLSKLKRLSLTNIPQMAKALAKIAYPSPGIVCKVALAQIESYSNLIEAFV ECAKYFTDLGYDVLVWSVLSSLGGQQRSRTQESSVLLTSKWLQALSRFSGKVFARYPNMD ASPVLRYVHSQLLRGNSTDLVILKELIGSMGGIVPDVDFTDAQLRAMTGGELLRRETLVN LGDQRAVSVKSAARLMKALSRSNLAAQLLINIAQYRQNAIYNTADASAHIKYLSAIVDDT HQILSQYLDLLRSNLDPETFDKLVPDIIQLIKDYGLDVNLAFMIRRASIRWEIKGTATTS TPTKDATTKPVTDIDGDVAMEPAPAENATPEAKDESAAASQKSSGRPESLSEALAPLIEQ IPSVLPRQTWQYITPAGYVFFWSLQLGNLVFPQDSYLAEGARLKKQAEEVMRDRSDMTRA GMNKKTRKRDDILDRQKALLQEANEGITRFSKARLHIGRQVASWFPADISKADQTADTLL EECILPRLQLGALDAEYCFRLIKFLHEFSAPNFKLMSLYDRLFNHNRLRAMIFTCTVREA EHLARFLRLILADLSKWHGDKSAYEKEALGLKDLQGTKTRHYLGFATAFDADGKPTEFVE HDPFKEMLFRWHKELNSALRSCLNGLEWMHIRNAITILKGVIDYFPAINFMAEKFLEQLK TITEREAASKNAPESEQQGHRVDLSVTAQTTYSELQKRRSKWILVQAFRSGVVSAPATSA RAPASGPPPPSDQPQKTDAKENKDEDRPSTTASSTLRAAAPEFKPDGAARSQQQSEVEDG EVKDIKAPARSREPPAGLPKPPPSREQPSRDAGTSSQRPGTPATAPSKPPTPAPAASSGR PEPPKFSTLPPGGHGLPNRPELPSRPEPIPRFGQGRHDRRDIPMRDSRDYRDSNRDPRDP RDQHPRDMREPHGGRDSRDYRGPPPEPSRLDRPRDLPPLDRRPPPPEPSSRDGGWGPSRG EPPRWHDHGPPPDRDNRGPRERLPPPSSSRPDSRPSREAPKEPAPAPAPSAQNSPQEPPI NPDRARIIEADRPEIINPARAALINESSREPPSRSPRDHPPRDQPSRERPPRTESPRRSD RDRDRDRDRDRDRQPPSAPQQESARDSRDDRHSRHRHSDRPGTPREAHEPPVSHAHPRPE RDRNQEREERMPPPPPPPPRDQPYGGPPSRSDHDHPGRLNQQDPNYGRLNPIPTVDVGGG PPSGPRGRGGRNATRPGPVNGPPMRPSDPRFPSMMEPMRPPSPSERHPPTGPSASRPPRR GQYDSNPNMHSPPTSVPAGPGVHPDRMRHMQQGMPPSGPSGIHPDRLSHISGGGQPTGPA GPHSRGPPPMSTPDRPSMSAPGSGSGSGSGSGSRPAPTGPSNDFPASTPTGPAAGNTMND RLRSGGRQLRGIQNTLDKAAAAAASPDPRSLRMSQRTSRQSLAGSDAQILAGGAGTSPVS TPTHDRPPQDHPLRESTRSDRGPPGPPTSSGRGEPMPLTMSIQVAPDSRENTYKDRDRAD RERQDRERDHHGRNGPAGLVNGAQEEYAASRSEHERARREHHRSSGLAGSATAPEGPSRG SGGSSGARSSRRSSRERGERERERERSPVRPSERGERERERERERERDRSERERGGEKER DRERDRERERDRDRGDREYRDRNERERDREHHHRDRSGARDERPERSERRSGREPAPSGG PVRDLLAPPPREPRDGSGHRSGSHHREGSSSRMSEDYPPARSSRGAPPTSVPPPPPPPPP PPPPPGPPREPRELRSRMGGGMPPDDHHGHRGGGDDRNNRKRRGEGPPMEVSGHGHGHGG HGGHVDKRPRR NT seq 7956 nt NT seq  +upstreamnt  +downstreamnt atgcctccaaagcgtaagagaaacgaccggggtcccaacgacgctggtctttccaggcct gctcctcatcggcctggcgatatgacgctcagccagcacgagcgaagcttcgacggcctc cgcagaggtcctcccagaaatgcccgtcgcggcgaccgtcgcgactcgtacacccctaac tcatctactaacgcatcggcacccgtctcgccatcgcttcctagacccccgagctcatcc tcatcgatggctgcacctcctcctccagcccctcctcaaccgccgccagctcccgcggtg accccagcacccgccacatcaacaccagctccagcttctatgccggcccccccgcccccg tcatcatcagctcctgcagctgcctctactcacatcccctacgtctacgaatacaccata attaccgacgatcacttaagtagatggacgaagggcgcgcgacaggaaattatcgaccac ggcattcagtcacgcgacgacgaggacctgaccgaggtcgccatgatcttccaggagctt atccattccgtcacagacggccgcctgccgggtgcggaggctggcggcgtggtcaaggag atccttggccctgaaatttcggaagaggatcgtaagaatggcgccttcgacccgcacacc ctgttcctcgacaccgtctcgaccttcgtcgacgtcgagtcagggccgctgcatccccag ctacgcgacttcatgatggctaccgaggtgtcgccggctttgatgcgtgtcgtcctggac ccggaaatcctccagcacctggatcttatccggagtaccttcgtacggatgggtatccgt aactcgacaaatcttctctatcgccaggccaactacaacctgctgcgcgaagagaccgag ggtttctcgaagctggtcaccgagttattcaccacgagcaattccgagccgccgtcttcc gaggtcgtgcaggccacgttcaacagggttatgggcctgattggtaccttcgacctgcac cccggccgcgtgctcgacgtgacgctcgacgtctttgcgtccgtcctcatcaagcagttc cgctttttcattaagttcctgcgcatcagctcctggtggccacgtagccagctccagatg cgcaccgacgtcttcactggaggcctgcccatctgggccctccccgaccattacggctgg accgcaaccgaggaggaagaggctgctctggagcagcagcgtctgcagcgcgacattgcc ttttgggatcgcgcccgtgatctaaagctcaaggcctttttcgagctgggtggtcgccag ctcctgccatcggatgaagagcgcgcaaggagtgacgtctcggacgacgacgtgagccct gagaatgccattgagcgcgagtggatcaagattacacagactcgcccgcctcctggcaac cgagacgccgcccagatgctgggtttcaagctgcgcttctacacttctgagttccgcaat gctgaggataccctcccagcaaacctgctctacttgatcgctttgctcatcaaggtcggc ttcatctcgttgacagatctctggcaccacatttggcccctcgacgaggacatggagcgc gtcaaggcccagaggttcaaggagctcgaggagaaggaaaaagccaaccgccctggtggt gagaagaacgcactcaccatggcgggtgccctccctgacgacatgccccctcccccgagc aacaaccgccgcgaggccgaggctaagaaagagcctgagaccaagaaagaagaacaagcc gaggagaagcccaagctgcctgagccaaacgaccaaaaggttgacctgctcaggtgcttg ctcacgatcggcgccctgcccgagtctctcttcatcatcggtcggcacgactggctcttg gaaggctacccggacatcatcccgctgttccatcgcatcattcaccactccatcgaaaag gtctaccaggagacccagcccagggctaccatgtcaatggactgtggcatgaagaagctc ccggacatcgaccagtcgggcgtgcccaagggcagcgtcaagctgactaccccgatcgtc cggcgcgctctgcgctggcccttcccggacaaggctgatgttagcgacggcccttcgtac cgcttctactgggacgagtgggccgacaacgtgccagtctgccagactgtcgacgatgtg ttcacgctctgcgacaccctcgttaatgtcattggcgtccacattggccaggacgcctcg ctggtggccaagctcgccggcatcggctgtaagagccttgctgacgacccctcgcctgcc aacatgaaccgctggttggacctcctcaagcgcctgctggtcccggcgctgagcctgagc gagaccaactcgtccatcgtcgaggctgtctggagtttgctgaagcagtacccgatcaag acccgctacggcgtgtacgctgagtggtacgagggccagacctcgcgccttgagcccatc cgcaaagccttccaccgcacgcgcctggagacactgagcaagttgaagcgcttgtccctg acaaacatcccgcagatggccaaggcgctggccaagatcgcttacccgtctcctggcatc gtctgcaaggtcgcgctggcgcagatcgaatcatacagcaacctgatcgaggccttcgtt gagtgcgccaagtacttcactgatctaggctacgacgtgctcgtctggtctgtcctgagc tcgctcggtggtcaacagcgcagccgcacgcaggagtcgtcggtgctgctgaccagcaag tggctgcaggcgctgtcacgcttctccggcaaagtctttgcgcgctatcctaacatggat gcttcccctgtcctgcgctacgtccacagccaactgttgagaggtaactcgaccgacctc gtcatcctgaaggagctgatcggctccatgggtggtatcgtgcccgacgtcgactttact gatgctcagctgcgcgccatgacaggcggcgagctgctacgccgcgagacgctggtcaac ctcggcgaccagcgcgctgtctcggtcaagagtgccgctcgcctcatgaaggccctctcg cgttcgaacttggctgctcagctgctcatcaacattgcccagtaccggcagaatgccatc tacaacacggccgacgccagtgcccatatcaagtacctgtctgccatcgtcgatgacact caccagatcctttcgcaatacctcgacctgcttcgcagcaatcttgatcctgagacgttc gacaagctcgttcccgacatcatccaactcatcaaggactatggtctcgacgtcaatctc gcgttcatgatccgccgtgcaagcatccggtgggaaattaagggtactgctactacctcg actccgaccaaggacgcaactacaaagcccgttaccgatatcgacggtgacgttgctatg gagcctgcgcctgcggagaatgccacaccggaagcgaaagatgaatcagctgccgcgtca caaaagtctagcggtcgccccgagtcactgtccgaggcgctggcgccccttatcgagcag atccccagcgtcctgccgcggcagacgtggcagtacatcacgcctgctggctatgtcttt ttctggtctttgcagctggggaacctggtcttcccgcaggatagctaccttgccgagggt gccaggctcaagaagcaggccgaagaggttatgagggaccgcagcgatatgacgcgcgcc ggtatgaacaagaagacgcgtaagcgtgacgacatcctcgatcggcagaaggccctgctg caggaggccaacgagggcatcacgcgcttctccaaagcgcgcctgcacatcggccggcag gtcgccagctggttccctgccgacatctccaaggccgatcagacggcggatacgctgctg gaggaatgcatcctgccacgcttgcagctcggcgcgcttgacgcggagtactgcttccgc ttgatcaagttcttgcacgaattttcggctcccaacttcaagctcatgtcgctctacgac cgtctcttcaaccacaacagactgcgggccatgatcttcacgtgtaccgtgcgcgaggcc gagcatctggctcgcttcttgcgccttatcctggccgatctatccaagtggcatggcgac aaaagcgcgtacgagaaggaggcgcttggcctcaaggatctccagggcaccaagacgcgg cactacctcggctttgccacggctttcgatgctgatggcaagccgaccgagtttgtcgag cacgatccgttcaaggagatgctgttccgctggcacaaggagctcaacagcgccctgagg tcctgcttgaacggcttggagtggatgcacatccgcaacgccattaccatcctcaagggc gtcatcgactacttccctgccatcaacttcatggccgagaagttcctggaacagctcaag accatcacggaacgcgaggcggcctccaagaacgctcccgagagcgagcagcagggccac cgcgtcgatctgtcagtcacggcgcagactacatactcggagttgcagaaacgccgctcg aaatggatcctcgtccaggcgttccggtcaggtgtagtaagtgctccggctacatctgct cgtgcgccagcctctgggccgccgcccccttctgaccagccacagaagaccgatgccaaa gaaaacaaggacgaggaccggccctctaccactgccagctctacgctcagggccgcggcg cccgagttcaagcccgacggcgccgcgcgctcgcagcaacaaagcgaagtcgaagacgga gaggtcaaggatatcaaagcgcctgcgagaagcagagagccaccagccggcttgcccaag cccccgccgtcccgggagcagccgtcacgagatgctggtacctcgtctcagagacctggc acgccagcgacggccccttcgaagccaccaacgccagcccctgctgcctcatctggtcgt cccgagccgcccaaattctcgactcttcctcctggcggccacggtctgcccaaccgacct gagctgcccagccggcccgaacccatccctcggtttggccagggccgtcacgatcgccga gatattcccatgcgcgacagccgtgattatcgtgacagcaacagagaccccagagacccg agagaccagcaccctcgcgacatgcgcgagccccatggcggtcgggacagccgagactac cgtggaccgccaccagaaccgtcaagactcgataggcctcgtgacttgccgccgctggac aggcgtcccccccctcccgagcctagctcgcgcgatggcggttggggtccgtctagaggc gagccgccgcgttggcatgatcacggcccgccgccggatcgtgataaccgcggcccgcgc gagagacttcctcccccgagctcgagccgacccgactccagaccgtctagggaagccccc aaggagccggctcccgctcctgctccctcagctcagaactctccacaagagcctccaatc aaccccgaccgtgcacgcatcatcgaggctgaccgcccggaaattataaatcccgcccgc gccgccttgatcaatgagtcgtcacgggagcctccgtcgcgctcgcctagagatcatcca cctcgtgaccagccttcgcgggagaggcccccacgtaccgagtcgcccagacgcagcgat agggaccgcgatcgcgaccgcgaccgcgaccgtgaccgtcagcccccgagtgccccgcag caggagagtgcccgcgatagtcgcgacgatcgccacagccgtcatcgtcattccgatcgt cctggcacgccacgcgaggctcatgagccgcctgtttcgcatgcccatccgcgcccggag cgcgataggaaccaagagcgtgaggagaggatgccgccgccgccgccgccaccaccaaga gaccagccatacggtggcccgccgtctcgttctgaccacgaccatccaggcaggctgaac cagcaagaccctaattatggccggctcaaccctattccgactgtcgacgtcggcggcggt cctccttcgggcccgcgcggccgcggtggtaggaatgccacccgccctggacccgtcaat ggtccccctatgcgcccatccgaccctcgcttccctagcatgatggagcccatgcgtccc cccagcccatccgagcggcacccacctactggtccgtctgcttcaagaccgcctaggaga ggacagtacgacagtaaccccaacatgcactctcctccgactagcgtgcctgccggtcct ggcgttcaccctgataggatgcgacacatgcagcagggtatgcccccaagcggcccatcc ggcatccatcctgaccgtcttagccacatttctggtggaggccagcccacaggccctgca ggccctcactcgcgcggtcctcccccgatgtcgactcccgaccggcccagcatgtctgct cctggatctggatctggatctggatctggatctggatcacggcctgccccaacgggacct agcaacgatttccctgcttcgacgcccactggtccggcagctggcaacaccatgaatgat aggctgcggtctggtggcagacagctgcgcggcatccagaataccctcgacaaggcagcg gcagcggccgcgagcccggatcccaggtccctgcgcatgtctcagcgcacatctaggcag agccttgccggttcagatgcgcagatcctggctggtggtgccggaacgtcaccggtgtca acgcctactcatgacaggccgccacaagatcatcctctgcgggagtcgactcgctcggat cgtggtcctccgggcccgccgactagctcaggcagaggtgagccaatgccgctgaccatg tcgatccaggttgctcccgattcgagagagaatacctataaggacagggatcgcgccgat agggagcgtcaggaccgcgagcgtgaccaccacggtcgtaatggcccagctggactggtc aacggggctcaagaggagtacgccgccagccggagcgagcatgagagggctcggcgtgag catcatcggtcttcgggcttggctggtagcgcgacagcaccagagggtccttctcgcggc agcggtggtagcagcggtgcacgctcatcccggcgtagtagtcgtgagcgtggggagcgc gagcgtgaacgcgaacgctcgccggttaggccgtcagagaggggtgagagggaacgtgag cgtgagcgggagagggagagggaccggtctgagcgtgaacggggcggtgaaaaggaaaga gatcgtgagagggacagagagagggagagggacagagaccgtggtgaccgcgaatatcgt gatcgcaacgagcgggagagagatcgcgagcatcaccaccgcgatcgtagtggcgcaagg gatgagcggccggagcgctccgagcgtcgatctggacgcgagcctgctccatccggtggt ccagtaagggatctgcttgcccctccgccgcgagaaccccgtgatggaagcggccatcgc agcgggagccaccatcgcgaggggtccagttcccgaatgagtgaggattatcctcccgct cgatcgtctcgcggtgcccctcccacgagtgttcctcctcctcctcctcctcctcctcct cctcctcccccgcccggtcctcccagggagccgagagagttgaggtcgagaatgggcggt ggtatgccgccagatgatcatcatggtcatcgcggaggtggcgatgacaggaataacagg aagagaaggggcgagggcccgccgatggaggtttctgggcatgggcatggacatggtgga catggaggacatgtagacaagcggcctaggcgttag

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