KEGG   Thermochaetoides thermophila: CTHT_0038140
Entry
CTHT_0038140      CDS       T03100                                 
Name
(RefSeq) putative pre-mRNA splicing protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
cthr  Thermochaetoides thermophila
Pathway
cthr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cthr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CTHT_0038140
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cthr03041]
    CTHT_0038140
   03400 DNA repair and recombination proteins [BR:cthr03400]
    CTHT_0038140
Spliceosome [BR:cthr03041]
 Complex B
  Other components
   Prp19 complex
    CTHT_0038140
 Complex C
   Prp19-CDC5 complex
    CTHT_0038140
DNA repair and recombination proteins [BR:cthr03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    CTHT_0038140
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 Rap1_C TPR_HPS5_insect
Other DBs
NCBI-GeneID: 18257852
NCBI-ProteinID: XP_006694236
UniProt: G0S8A6
Structure
LinkDB
Position
Unknown
AA seq 768 aa
MPVVKGGVWTNIEDEILKAAVSKYGLNQWARVSSLLARKTPKQCKARWNEWLDPSIKKIE
WSREEDEKLLHLAKLMPTQWRTIAPIVGRTANQCLERYQKLLDEAEQREASELGLTGPDG
GETRAPTAEDVRKLRPGEIDPDPETKPARPDTIDLDEDEKEMLSEARARLANTQGKKAKR
KARERQQEESRRLAALQKRRELKTAGINIKITTRKKGQMDYNADIPFEKKPAPGFYDTTE
EIARNEWQRAHFDPKKQQVGNKRKSDEEEEAERKKRKNNKDGPSASLQAALKAGQMQKLR
EAEQSSKRKPLILPAPQVSDSELDEIVKMGMIGERASAMARESENDATRGLVGNYSTLNT
GAPIRTPRAPAQEDHIANEIRNIKALTETQSSLLGGENAPLAEGAGTTGFESVVPKKQVV
STPNPLATPLRQGPNGGATPLRPGQTPLRTPRDTFSLNATDGVSMEHALRQQLKQKLAAL
PKPKETEWELELPEEKQEPKTQEELEEDAADRDRRERELREARELAERRRRTQVMQRELP
RTAVVDIDALLRAADEIEDPARALVAREAALLMAHDAAKYPLPGAPPGVKPVEIPRFSDD
ELAEARLQILMEMKEKPAPEVVHAIWNRREENLNALRLGLGYYDSDSEDGEDDVANIRAT
LEAALDRLMASAEKGNKLEKKLNLHLGGYKNRAEMLRKKLGEAHAALEKARNALAGFQVL
RASEEQAIQRRLEALRAEVAFVSTRERKAQELYRKLRDELEELRLEQA
NT seq 2307 nt   +upstreamnt  +downstreamnt
atgcccgtcgtcaagggaggcgtgtggaccaatatcgaggacgagatcctcaaggccgct
gtcagcaagtatggcctcaaccagtgggcgcgtgtgtcgtcgctgctggcgcgtaagacg
ccgaagcagtgcaaggcgcgatggaacgagtggctggaccccagcatcaagaagatcgaa
tggagccgcgaggaggacgagaaactgcttcacctggcaaaacttatgccaacgcaatgg
cgcactattgccccgatcgtcggtcgtactgccaaccagtgtctcgagcgctaccagaag
ctcctcgatgaggccgagcagcgcgaagcgtccgaactgggcttgacgggccccgatggc
ggcgaaactcgtgccccgactgccgaagacgtcagaaagctgcggccgggcgaaattgac
ccagatcccgagacgaagcccgcccgtcccgacacgatcgacctcgacgaggatgagaaa
gagatgctgagcgaagcccgtgcccgtctggccaatactcaaggcaagaaggccaagcgg
aaagcccgcgagcggcagcaggaggagtcgagacgtctggctgcgttgcagaagcgccgc
gagctcaagacggccggcatcaatatcaagatcacgacccggaagaagggccagatggat
tacaacgccgacatcccctttgagaagaagccggctcccggattctacgacacgactgag
gagattgctcgcaacgagtggcagcgtgcccatttcgaccctaagaagcagcaagtgggc
aacaagcgcaagagcgacgaggaggaagaggccgagcgcaagaagaggaagaacaacaag
gatgggccttcggcatctcttcaggcggccctcaaggctggccagatgcagaagctgcgt
gaagccgagcagagcagcaagcggaagcctctgatacttcccgctccgcaggtcagcgac
agcgagctggatgagatcgtcaagatgggcatgattggcgagcgggccagcgccatggct
cgcgagagcgagaacgacgctactcgtgggcttgtcggtaattactcgaccctaaacact
ggcgcgccgatccggacaccaagggctcctgcccaagaagaccatatcgccaacgagatc
cgcaacatcaaggctcttaccgagacgcagtcgtcactgctcggcggcgagaacgctccc
ttggccgaaggtgccgggacgacaggcttcgagtcggtcgtccccaagaagcaagttgta
tctacacccaatccgctcgcaactccgctgcgccaagggcccaatggcggagcgacgccg
ctgcggcccgggcaaacacctctgcggacgccccgcgataccttctctcttaatgccacc
gatggcgtgtcaatggagcatgctctccggcagcagctgaagcagaagctcgcagcgctg
ccgaagccgaaggagacagagtgggagctcgagcttcccgaggagaaacaggagcctaag
acacaagaggagctggaggaagatgccgctgaccgggaccggcgcgagcgggagctccgc
gaggcccgcgagctggctgagcgccggagacgtacccaggtcatgcagcgtgagttgcca
cggacagctgttgtcgatatagacgctttgctccgtgcagcggacgagatcgaggaccct
gcgcgggccctggtcgcccgtgaggctgccctacttatggctcatgatgctgccaagtac
ccgttgccgggtgctccgccgggagtcaagccggtcgagatcccacggttcagcgatgac
gaacttgccgaggccaggttacagatattgatggagatgaaggagaagcctgcgccagag
gtagttcacgctatctggaacaggcgggaggagaatcttaatgcccttaggctaggcctg
ggatactacgactcggacagtgaggatggggaggatgacgtggctaacataagagcaact
ctcgaggctgcccttgaccgcctcatggcctctgcggagaaaggcaacaagctcgagaag
aagctcaacctgcacctcggcgggtacaagaaccgagctgagatgctgcgcaagaagctc
ggcgaggcgcacgcggccctggaaaaggcgcgcaacgcgttggccggcttccaggtacta
cgggcgtccgaagagcaagctatccagcggcgtttagaggcgctacgggccgaggttgcc
ttcgtcagcacccgcgagcgtaaggcccaggagttatacagaaagttacgggacgagttg
gaggagttgaggcttgaacaagcgtaa

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