Thermochaetoides thermophila: CTHT_0038260
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Entry
CTHT_0038260 CDS
T03100
Name
(RefSeq) small nuclear ribonucleoprotein E-like protein
KO
K11097
small nuclear ribonucleoprotein E
Organism
cthr
Thermochaetoides thermophila
Pathway
cthr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CTHT_0038260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cthr03019
]
CTHT_0038260
03041 Spliceosome [BR:
cthr03041
]
CTHT_0038260
03032 DNA replication proteins [BR:
cthr03032
]
CTHT_0038260
Messenger RNA biogenesis [BR:
cthr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
CTHT_0038260
Spliceosome [BR:
cthr03041
]
Complex A
U1 snRNP components
Sm proteins
CTHT_0038260
U2 snRNP components
CTHT_0038260
Complex B
U1 snRNP components
CTHT_0038260
U4/U6.U5 tri-snRNP components
CTHT_0038260
Complex C
U2 snRNP components
CTHT_0038260
DNA replication proteins [BR:
cthr03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
CTHT_0038260
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
18257864
NCBI-ProteinID:
XP_006694246
UniProt:
G0S8J0
Structure
PDB
PDBj
LinkDB
All DBs
Position
Unknown
AA seq
98 aa
AA seq
DB search
MTSRGAPAGRRVLLPPINFLFRLLQQRTPVQIWLYEQLAIRITGVIRGFDEFMNLVIDDA
VEIKLSPKTNEPESKRPLGQILLKGDNISLIQALSGSA
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcagaggtgccccggccggtcgtagagtgctattgcctccgatcaactttctt
ttccgcttgctccaacagcgtactccagttcaaatttggctctacgaacagctggccatc
cgcatcacaggcgtgatacgcggcttcgatgaattcatgaacctggttatcgatgatgcc
gtcgaaatcaagctttctccgaagaccaacgagcccgagtccaaacggccattggggcaa
atccttctcaagggagacaacatttccttgatccaggccctgtctgggtcagcatga
DBGET
integrated database retrieval system
