KEGG   Thermochaetoides thermophila: CTHT_0042310
Entry
CTHT_0042310      CDS       T03100                                 
Name
(RefSeq) putative autophagy protein
  KO
K08331  autophagy-related protein 13
Organism
cthr  Thermochaetoides thermophila
Pathway
cthr04136  Autophagy - other
cthr04138  Autophagy - yeast
Brite
KEGG Orthology (KO) [BR:cthr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04138 Autophagy - yeast
    CTHT_0042310
   04136 Autophagy - other
    CTHT_0042310
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cthr04131]
    CTHT_0042310
   03029 Mitochondrial biogenesis [BR:cthr03029]
    CTHT_0042310
Membrane trafficking [BR:cthr04131]
 Autophagy
  Autophagosome formation proteins
   ULK complex
    CTHT_0042310
   Atg1 complex
    CTHT_0042310
Mitochondrial biogenesis [BR:cthr03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-independent mechanism factors
    CTHT_0042310
SSDB
Motif
Pfam: ATG13
Other DBs
NCBI-GeneID: 18258269
NCBI-ProteinID: XP_006694632
UniProt: G0SAH5
LinkDB
Position
Unknown
AA seq 952 aa
MHQQPRHPPRVASPASSPQTNPARTNNPRDRPRSSLDITTRRDGLDTNGSETPAPGPSRE
SIKKLDQIIQNFYYKAAVLILQSRLNLTPAVARNSDGRKLNKWFSIDTDDIEEFKEELRV
YRTCSAFDNPPPPMIVETYIDASSISSSQSLVLIDENGKRWDVLEALNSSETPDDSPRRR
RGQRRSAEVVLERWRVELRCLPNIDRDEFGPSLPAIYKRAIVYFRALFMMTRMMPCWKYS
QQALAKGIHPALEVKCRILTTEPEYTSYDPLRIPLHDGGEPVTEYFFPDLEVPIGRFYSS
VTYRNDVNFRVDDAESLLSSRFMGADDALFKPSIASRRDHAVALDSFAEPGSLPSRNQGR
GVPEPQQTYGSLSTFHGPGAYGASPITALRSVRPPGSDTSSPTASTSTSMEQPEPPHSLP
IRGATARPSLRTYEPSRRPSVSFQPFKAGSLSGSPRISEGEVPPSPQSYTRPGLSGPSRT
GARSSLTAGSAASLRGPPVAPPQDVPSVTGSPRPPSRYSSSFGHRRGRPSFGGQSLKGDD
DQASSGKQSLSSSAQPGSGFLAELGGVGSSGSFAADDDNISEFLKALESRKTLKSFEPSR
AGEATASKRTAAQLSKFILLRDSHAALTDSMASSMYLQRPSTTSSSRQITPVPAMNPSTL
SVSSSPGKPVSPHTPHMPAIPSRLSENSIIDYEAEARQTTRHRGTPNIATTEEEEPPSEE
TSNSETPFATQRDDRSVASPAGTGTATTAAIDIPMSPRLLQVSAAGNRRASSVAHQQHRS
LLADLDDFSGARHQRSASVEDASLGRREVPSLSALLAFQRGGERIGADSRPAGEAGEDAQ
QQAGNSQVRSEGAEGSESRDIKSKQRSGVSGRFAGGSSVEGDEEPLLFAMSELERESRRS
LEEGRQPSPSNEGQAGSGRDLLTTGGAAPRSGTPAGGREKPYEPRGILRKGW
NT seq 2859 nt   +upstreamnt  +downstreamnt
atgcatcaacaaccccgtcaccccccgcgggtggcctctcccgcttcctctcctcaaaca
aaccctgcacggacaaacaaccccagggatcggccccgcagcagcctagacatcaccact
cgtcgcgatggtctcgatacgaacggctctgaaacgcccgcgcccggtccgagccgggag
tctatcaagaagttggaccagatcatccagaacttctactacaaggcggccgtcttgatc
cttcagtcgcggcttaacctgaccccggctgtcgcgaggaacagcgacgggaggaagttg
aataaatggttctcgatcgacacggacgatatcgaggagttcaaggaggagctgcgagtg
tacaggacgtgcagcgcctttgacaacccccctcctcccatgatcgtcgagacctatatc
gatgcctccagcatctcgagcagccagagcctcgtgcttattgatgaaaacggcaagcga
tgggatgtcctggaagctctgaactcgtcagagacgcccgatgatagtcccaggagacgt
cggggtcagagacgcagtgccgaggtggtcttggagcgctggcgcgtcgaacttaggtgc
ttgcccaacatcgaccgagatgagtttgggcctagcttgcctgctatctacaaacgggct
attgtttacttccgggctctcttcatgatgacccggatgatgccgtgctggaaatattca
cagcaagccttggcgaagggcatccatcccgcgctcgaggtgaagtgtcgtatcctgacc
acagagcccgagtacacgagctatgaccccctacggatccccctccacgatgggggagaa
cccgtcaccgaatacttcttccccgatctagaggtgccaattggtcggttttactcatct
gtcacgtatcgcaacgacgtcaactttcgggtagacgacgcagagtctctgctcagctca
cgcttcatgggcgccgatgatgcattgttcaagccgtcaattgcctcaaggcgcgatcat
gcagtcgcactggattcgttcgctgagccgggttctctcccttctcgaaaccagggacgc
ggcgtcccagagccgcagcagacatacggtagtttgtcgacattccacggtcccggagca
tacggtgccagccccatcacagccctccgatctgtgcgtcctccggggtcggataccagc
tctccaacggcatccacgtcaacgagcatggagcagccggagccgcctcattcactacct
attcgtggtgccacggctcgtccgtcgctgagaacgtatgaaccgagcaggcgcccgtca
gtgtcgttccagccgttcaaagctggatcgctttcagggtctcccagaatctccgagggc
gaagtgccgccctctcctcagtcttatacacgtcctgggctcagcggaccctcgcgaaca
ggggctcggtcgtcactgacagccggctcggcggcatcattgcgcggtcctcctgtcgca
ccgccacaagatgtgccgtcagttacaggatctccgagacccccaagtcggtacagcagc
agctttgggcatcgacgggggcgacccagctttgggggacagagcctcaaaggtgacgat
gaccaagctagcagcgggaaacagagtctctcctcatcggctcaaccaggttcggggttc
ttggcagaacttggaggcgttggcagttcagggtcctttgcagcggacgatgacaatatc
tctgagttcttgaaggctcttgagagccgcaagactcttaaaagcttcgaaccgtccaga
gctggcgaggcgactgcctcaaagaggacagctgcccagctttcaaagttcatcctcttg
cgcgattcgcatgccgccctgaccgactcgatggcatcaagcatgtatttacaacgtccg
tcgacaacctcctctagccggcagatcactcctgtgcctgccatgaatccttctactttg
tccgtctcgtcctcccctggcaaacccgtctccccgcatacgccccacatgccagccatc
ccgtcccgcctgagcgaaaactctattatcgattacgaagccgaagcccggcagacgacc
cgccatcgcggcacgcctaacattgcgaccaccgaagaagaggagccgccgtcagaagaa
acctccaacagcgagaccccgttcgccacacaacgcgacgaccgttctgtcgcttcacct
gctggaaccggcaccgctacaactgctgccattgatatccccatgtcgccgcgcctgctg
caagtcagtgctgccggtaatcgacgggccagttcggtggctcatcagcagcatcgctcg
ctgctggctgatttggatgatttttctggggcgagacatcaacggagtgctagtgtggag
gatgcgtcgctggggaggcgtgaggttccgagtttgagtgccttgctggcttttcagcga
ggaggagagaggatcggagctgattcccggcctgctggcgaggctggagaagacgctcag
caacaggcgggtaatagccaggttcgctcggaaggcgcagagggatcggagagcagagat
atcaagagcaagcagcgctctggcgtgtcagggcggtttgccggagggagcagtgtcgag
ggggatgaggagccgcttttgtttgccatgagcgagttagagagggagtcgagacgcagt
ttggaagagggacggcagccatcgccgtcgaacgaaggacaagctggtagtggccgtgat
ttgcttactactggtggtgctgctcctcggagtggaacaccagctggtggacgagagaag
ccgtatgagccgagggggattttgaggaagggctggtaa

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