Thermochaetoides thermophila: CTHT_0043540
Help
Entry
CTHT_0043540 CDS
T03100
Name
(RefSeq) ubiquitin-protein ligase-like protein
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
cthr
Thermochaetoides thermophila
Pathway
cthr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
CTHT_0043540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cthr04121
]
CTHT_0043540
Enzymes [BR:
cthr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
CTHT_0043540
Ubiquitin system [BR:
cthr04121
]
Ubiquitin ligases (E3)
HECT type E3
CTHT_0043540
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
DUF5427
BUD22
Arm
Motif
Other DBs
NCBI-GeneID:
18258392
NCBI-ProteinID:
XP_006694749
UniProt:
G0S8V3
LinkDB
All DBs
Position
Unknown
AA seq
1893 aa
AA seq
DB search
MSRRVTRSSARQAASQAASSTPASSSILGLSSAAPTPIAQAPAPPPSARKRKNIPDSPPT
STSVDTPSSARRSKRQRVAHTSPPPQPAQPPPPAPAPAAATATSRRRKGKAAATMSAPAP
PAGPPDPTENQPSASSSRRSSRNKKTAASTAEEPIVAASSRSSRRSNRTSNDDQDVVMGG
TDDHDKEASAPPPPPPPIQERYPDEDSDDQDEDDHYDDDDGYSFGGGFGGHGGPLHGLSS
TIRTLSGMVSGLPARFRDILHNLRQKHDPDSQLVALQELSELLLVSNEDSLSGNFSIDAF
VKELVTLMQPNELTGEENPEIMLWACRCLANLMEALPASTSNIVYGQAVPILCQKLLEIS
FIDLAEQALSTLEKISVDYPGCIVREGGMTACLQYLDFFATSTQRVAVTTAANCCRNLDP
ENFPVVRDVMPILLNVLGSNDQKVVEQASLCVTRIVESFRYYPHRLEELVSVDLLKAILR
LLLPGSTNLIGPHIHTQFLRVLAFVARASPRLSAELFKLNVVETLYQILTGVSPPSGDDD
IASKLDSVLIMQALIHRPREQIIETLNVICELLPNLPGSADPAAGDFVEISESVLTPSTS
GSRRKTANEKRTELLRTCKDEVRRFAMILFPTLTDAYSSTVNLTVRQKVLTAQLKMLSNL
DKPILLDALKPVSYASFLASILSQQDHPSLVMYALQATELLVSRLDLVYRYQLYREGVIA
EITKLAAEARDQSLSPESSLDRAADNQSDRDSENEDEENEEGDEEDEDRSRRSSDEEDDE
DEDEERDRDDQEEDERHRDDYTGSPTSSQGSTMSMGASSGIRFGLDKARIAQVAKRFLEL
HENEEAAKGMREKAEQILAGLSALASDIENFYLCRTLLSSSQPLDRGIKLFTKLASYFDS
DILESVTSAELLASGIVRVLEKVLSNPDEELAIAAQSAFLQVFMGYTVKSKPKTATADSP
ATPLSVLIHKLQDLLSRSEHFEVITVHHSGSDRSAASMLAKQIRLRLAADDDSDIPRNYR
NIMVSIHAITTFKSLDDYLRPRISATPRNSRREALSRAFDALANTAGMPLNSSAAARLRQ
AMGGSSSSSSSSSSAAPPPPTTSGSQPSASSPLRSTRKTTRSSRMQQPGEAPSTPEPSTS
REKAVLRRSSRRQGTTSSEDPAARPPPPDDEDDLDNALECADEKQLSDDEDMGDDEALDV
VDEGMSEAQTPDPPAANMEMGTGGKVTARRDDGTKVSTPSHSRSGATAPSRLSGLAAALQ
STPTPSSSSRPMSYAGAVQSTPNDWHLEFSINGKVIPLDMTIYRAVHNYAAIQDDYTGRG
VWAAIHPVKFRRVPGPPPTTESSGFGSQNDATCEVDENGVPLSLANFPVTASILRLLKKL
HDLNANLDDVLVENKETLRLNVEPLSQFVNTKLTAKLNRQLEEPLIVASQCLPSWSEDLA
RLYPFLFPFETRHLFLQSTSFGYARSMSRWQNAQSQEDSRRDRRADERPFLGRLQRQKVR
ISRNKIMESAVKVMELYGASQSILEVEYFDEVGTGLGPTLEFYSTVSKEFCKKKLKMWRD
NDPNGDDEYVSGSNGLFPRPISDDFAASEEGQKVLQLFKTLGKFVARSMIDSRIIDINFN
PIFFRIGDESTAVRPSLGAIKQVDPVVARSLMLIKKFALAKKEIDEDPTRSPAQKVVDME
NIVIDKIKIDDLYLDFTLPGYPEIELIPNGSQTRLTIDNVEEYLERVIDMTLGSGVRRQV
DAFRQGFSQVFPYSALSAFTPDELCSLFGRVEEDWSLETLMDSVKADHGYNMDSKTVKNL
LQVMSEMTPQQRRDFLQFTTGSPKLPIGGFKKLTPMFTVVCKASEPPYTSDDYLPSVMTC
VNYLKLPDYSSIDILRQRLFTAIKEGQGAFHLS
NT seq
5682 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcagggtcacccgctcgtccgctcgtcaagcagcgagccaagcggcttcatca
actccagcttcgtcgtccatcctcgggctttcttcggccgccccaacgcccattgcccaa
gcccccgctccccctccaagcgctcggaagcgtaagaacattcccgactcgcccccgacc
tcgacatccgtcgacactccgtcgtcggctcgtaggtctaagcgccaacgagtggcacat
acgtcgccgcctccccagcctgcacaaccgccacctcctgctcccgctcctgcggctgca
actgctacatctcgccgtaggaagggcaaagctgccgcgaccatgtcggctcctgcaccc
cctgccggtcctccggaccccacagagaaccaaccgtctgcctcgtctagccggcgctct
agccgtaacaagaagacggctgcttccacagcagaagaaccgatcgttgcggcctcctcc
cgatcgagtcggcggtccaatcgcacatcgaatgacgaccaggatgttgtcatgggcggc
acggatgatcacgacaaggaggcgtcggctccgcccccaccgccccctcctatccaggag
cggtaccccgacgaggatagcgatgatcaagacgaggatgatcactatgacgacgacgac
ggctacagcttcggcggcggcttcggcggccatggtggtcccttgcacgggctctcgagc
acaattagaacgcttagtggcatggttagcggcctgcccgctagattcagggatatatta
cacaacttgcgccagaagcacgatcccgatagccagctggtcgccctccaagaactctcg
gagctcctgctggtctctaatgaagacagcttgtcggggaacttttcgatcgacgccttc
gtgaaagagttggtaacgttaatgcagccaaatgagctgacaggcgaggagaatcccgag
atcatgctctgggcgtgtcgttgcctggcgaaccttatggaggcactcccggccagcaca
tccaacattgtttacggtcaagccgtgcccattctctgccaaaaactgcttgagatttct
ttcatcgatctagccgagcaggccctcagcaccctcgagaagatctctgttgactatccg
ggctgcattgtccgcgagggcggcatgaccgcgtgccttcagtacttggactttttcgcc
acaagcactcagcgtgtagctgttaccacggctgccaactgctgtcgtaaccttgacccc
gaaaacttcccggtggttcgggacgtcatgccaattctgctcaacgtcttgggcagcaac
gaccagaaggtagtcgagcaggcttctctctgtgtgacgcgcatcgttgagagcttccgg
tattatcctcaccgcctcgaggagcttgtgagcgtcgatctgctaaaggccatcctgcgc
ctgctgctccctggcagcacgaacctcatcggcccccacatccacacgcagttcctacgt
gtcttagcattcgtggcccgcgcgagccctcgtctatcagcagagcttttcaagctaaac
gtggtcgaaacactctaccagattcttacaggtgtttcaccgccgagcggagatgatgat
atcgcgtcgaaactcgacagcgtcctgatcatgcaggctctcattcatcgtcctcgcgaa
cagattatcgaaaccctgaatgtcatttgcgagctactgccaaatcttcctggctcggcc
gatccggctgctggcgacttcgtggagatttcagagtcggtccttacgccgtcgacctct
ggctcgcggagaaagacggccaacgagaagcgcaccgaactcctcaggacttgcaaggac
gaggttcgccgcttcgccatgatcctgttccctactcttaccgacgcctattcgagcaca
gtcaacttgactgtccgccagaaggtcttgacggcccaactcaagatgctttcgaacctc
gacaaaccgatccttctggacgccctgaagcctgtctcgtatgcctcgttcttggcatcg
atcctctcgcagcaggatcatccctccttggttatgtatgcgcttcaggctacggagctt
ctcgtaagccgtctggacttggtgtaccgatatcaactttaccgcgaaggtgttattgct
gagatcaccaaactggctgcagaagcgagggatcagagcctctctcccgaatcatccctc
gatcgcgccgctgataaccagtcggaccgcgactcggagaatgaggatgaggagaatgaa
gagggtgatgaggaagacgaggatcgttcgcgtcgctcttcggacgaagaggatgacgag
gatgaagacgaggagagggatcgtgacgaccaggaggaagatgagcgccaccgagacgat
tacactggatccccgactagctctcagggttccacaatgtctatgggtgcgtcatccggc
atccgattcggccttgataaagccagaattgctcaggtcgcgaagcggttcctggagctt
cacgagaacgaggaagcggccaagggcatgcgtgaaaaggccgagcagatcttggccggt
ctctcagccctcgcgtcggatatcgaaaacttttacctctgtcgtaccttgttgtcttct
agccaacctctggaccgtggcatcaagctcttcaccaagctcgcttcttactttgactcg
gatatcttggagagcgtcaccagcgctgagcttctcgcctccggtattgtgcgcgtcctt
gagaaggttctgagtaatccggacgaagagttggccatcgccgcccagtcggcctttctc
caggttttcatgggatacacggtcaagtcgaagcctaagacggctacggcagactcaccc
gccacgccgctgagcgtcttgattcacaagttgcaggatctgttgagccggtccgagcat
tttgaggttatcaccgtgcaccacagtggatcggatcgcagtgcggcgtctatgctcgcc
aagcagatccgtctcaggctggcagcggatgacgattcggacattcctcgcaactatcgg
aacattatggtatcaattcatgccattacgacgttcaagtcattggatgattaccttcgt
cctcgtatcagcgcaacgccacgcaactcgaggagggaggctctctccagggctttcgac
gctctggctaacacagccgggatgccgctcaatagctcggctgcggcacgcttgcgacag
gccatgggcggctcatcaagctctagctcgagctcaagctcggctgctccccctcctccg
acaacgagcggttcccagccttctgcttcatcccctctgcggtccacgaggaagaccacc
cgctcgtcgaggatgcagcagcccggcgaggccccttcgacaccggaaccatcgacatcc
cgcgaaaaggcggttcttcgcaggtcttcacgtcgtcaaggcacgacctcgtctgaggac
ccggctgctcgcccgccgccccctgatgacgaagatgatctggacaatgccctcgagtgc
gctgacgagaagcagctgtcggacgacgaggacatgggcgacgatgaagcccttgatgtt
gtagacgagggtatgtcggaggctcagacacccgatcctcccgctgccaacatggagatg
ggtactggcggcaaggtcactgctcgcagggacgatggcaccaaggtctctacgccatct
cacagccggtctggtgctacggcccccagccgtctgagcggccttgcagctgccttgcag
tcaacccctaccccatcttcgtcctcacggcccatgtcgtatgccggtgcggttcagtcg
acccccaacgactggcaccttgagttcagcatcaatggcaaggttattcctctcgacatg
accatctatcgcgcagttcacaattacgcagctattcaggatgattacaccggtcgtgga
gtctgggctgccatccatcctgtcaagttccgacgcgtgcctggtccacccccgactacc
gagtcatcgggctttggcagtcagaatgatgcaacctgcgaggttgacgagaatggtgtt
cctctctcgctcgccaatttccccgtcacggcctcaatcctgcgcctgctcaagaaattg
cacgacctcaacgccaacctcgacgacgtactggtggaaaataaggagacgctccgtctc
aacgtggagccgctgtcgcagtttgtcaatacgaagctgacggctaagctcaaccgacag
ctagaagagcccctgattgtggcgagccagtgtctccccagctggagcgaggacctggcc
cggttgtatccgtttctgttcccgtttgagacgagacatctcttcctgcagtccacttcg
ttcggatatgcccgatctatgagtcgctggcagaatgcacagtctcaggaagattcacgc
agggaccgtcgtgctgatgagaggcccttcctcggtcgcctgcagcgccagaaggtgcgc
atctcgcggaacaagatcatggaatcggccgtcaaggtcatggagctgtatggagcttct
cagagcatcttggaggttgagtatttcgacgaggtgggcacaggcctaggtccgacgctc
gagttttactcgacggtgtcgaaggagttctgcaagaagaagctcaagatgtggcgggac
aacgaccccaacggtgacgacgaatacgtgtccggctcgaacggcctgtttccgcgaccc
atcagcgacgactttgccgcgtcggaggaaggccagaaggtcctgcagcttttcaagacg
ctgggaaagtttgttgctcgatccatgatcgactcgcgcatcattgacattaacttcaac
ccaatcttcttccgaattggagatgagtcgactgccgttcgaccttcgcttggagccatc
aagcaggttgacccagtcgtggcgcggtctctcatgctgatcaagaagtttgcgttagcc
aagaaagagatcgatgaggacccaacccgctcgccagcccaaaaggtcgtcgacatggag
aatattgtcatcgacaagatcaagattgacgacctttacctcgacttcacactgcctggt
tatcccgagattgagctcatcccgaacggctcgcaaacccgtttgaccatcgacaatgtc
gaggaatacctcgagcgtgttatcgatatgacactgggcagcggtgttcgccggcaggtt
gacgccttccgccagggcttttcgcaggttttcccttactcggcgctcagcgccttcaca
cccgatgagctctgttcgttgttcggccgagtcgaggaggattggtcgttggagacgctc
atggactcggtcaaggcggatcacggctataacatggacagcaagacggtcaagaacctg
ctgcaggtcatgagcgagatgacgccccagcagcgccgggacttcttgcagtttacgacc
ggcagcccgaagctgcctattggaggcttcaagaagctcacccccatgttcacggtagtc
tgcaaggccagcgagccgccgtacacgtcggacgattacctgcccagcgtcatgacgtgt
gtcaattaccttaagctgccggattactcgagcatcgatatcctgcgtcagcgactgttt
actgccattaaggagggacagggcgcattccacctgtcttaa
DBGET
integrated database retrieval system
