Thermochaetoides thermophila: CTHT_0044720
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Entry
CTHT_0044720 CDS
T03100
Name
(RefSeq) RNA polymerase II transcription factor B subunit 2-like protein
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
cthr
Thermochaetoides thermophila
Pathway
cthr03022
Basal transcription factors
cthr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CTHT_0044720
09124 Replication and repair
03420 Nucleotide excision repair
CTHT_0044720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cthr03021
]
CTHT_0044720
03400 DNA repair and recombination proteins [BR:
cthr03400
]
CTHT_0044720
Transcription machinery [BR:
cthr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CTHT_0044720
DNA repair and recombination proteins [BR:
cthr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CTHT_0044720
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
18258510
NCBI-ProteinID:
XP_006694861
UniProt:
G0S965
Structure
PDB
PDBj
LinkDB
All DBs
Position
Unknown
AA seq
514 aa
AA seq
DB search
MSIPAVPQSYQLSDYLEKLPGTTFRKLYQQPSSAFAIFRRMLPPLAKVFVQALLYMPQPM
LLSDLDVWVRPEAKMHRDRALSILRSLHIVQITPPGKDRPQEVQLTTNFRNSLRLALEGG
AAHNSFGVPSSLPVDPRIDIAFLDNYARKKWEDILHYVVSSVPVHGDAGPGGMGGGGPKA
SVKDLLLAGRLVERRPDTKTGIGITQAGFTFLLQEANAQVWTLLLLWLEAADQAKAAAAA
ASGVDPKNAPPTKPDSIEMLSFLFMLASLELGRAYDTDALSETRRNMLPALVDFGLIYIP
REDTRQYFPTRLATTLTSSASALRSVSSGFTAATNNTANDASSLGGADPSAHKGSIIIET
NYRLYAYTSSPLQIAVLALFTHLNMRFAGMVTGRLTRESIRRAISFGITADQIISYLASH
AHEQMVRAAAAAGRPVLPPTVVDQIRLWQLENERMRTSPGFLFKDFENVEEYMALAGYAE
EIGVLVWRSDRKRMFFASKFEQLRDYLKSRKKEG
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatccccgccgtgccgcagtcgtaccagctctccgactacctggagaagctgccg
ggcaccacctttaggaagctgtaccagcagccgtcgtccgcctttgccatcttccggcgt
atgctgccgccgctggccaaggtcttcgtccaggcgctgctgtacatgccgcagccgatg
ctgctgtccgacctcgacgtctgggtgcggcccgaggcgaaaatgcatcgcgaccgcgcc
ctgtctatcctccgctccctgcacatcgtccagatcactcctcccggcaaggaccggcct
caggaggtccagctgacgaccaacttccgcaacagcctacgcctggctctcgagggcggc
gccgcccacaacagcttcggtgtgcccagctcgctgcccgtcgatccgcgcatcgacatc
gcctttctggataactatgcgcgtaagaagtgggaggatatcctgcactacgtggtcagc
agtgttcccgtgcacggcgacgccgggccgggcggcatgggcggtggcgggcccaaggcc
agcgtcaaggacttgttgctcgccggccgcctcgtcgagcgccgcccggacaccaaaacc
ggcattggtatcacccaagccggatttaccttccttctgcaagaagccaacgcccaagtc
tggacgctgctcctcctctggctagaagccgccgaccaagcaaaagccgcggcggccgca
gcctccggagttgaccccaaaaatgcccccccgaccaagccagatagcatcgagatgctt
tctttcctcttcatgctcgcttccctcgaactcggccgcgcctacgataccgacgcgctc
tccgaaacccggcgcaacatgctcccagccctggtcgacttcggcctgatctacatcccg
cgcgaagacacgcggcaatacttcccgacccggctcgctacgacgctaacctcgtccgca
tccgccctgcgttccgtttcctccggcttcaccgccgcaaccaacaacaccgcgaacgac
gcctcttccctggggggagccgacccctccgcgcacaagggctccatcatcatcgagacg
aactaccgcctctacgcctacacctcctccccactgcaaattgccgtactcgctctcttt
actcacctcaacatgcgctttgccggcatggtgacaggccgcttgacacgggaatccatt
cggcgagccatcagcttcggcatcaccgccgaccaaatcatatcctacctcgccagccac
gcacatgagcagatggttcgtgccgcagccgcggcagggaggcctgttctgccgccgacg
gtggtagatcagatccggctgtggcagttggagaatgagcggatgcggacgagcccgggg
ttcttgttcaaggattttgagaatgtcgaggagtacatggcgctggcgggctatgccgag
gagattggggtattggtgtggaggagcgatcggaagaggatgtttttcgcgagtaagttc
gagcaattgagggattatttgaagagtcggaagaaggagggttaa
DBGET
integrated database retrieval system
