Thermochaetoides thermophila: CTHT_0045980
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Entry
CTHT_0045980 CDS
T03100
Name
(RefSeq) RNA polymerase-like protein
KO
K15178
RNA polymerase-associated protein RTF1
Organism
cthr
Thermochaetoides thermophila
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cthr03021
]
CTHT_0045980
Transcription machinery [BR:
cthr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
CTHT_0045980
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Plus-3
New_glue
Motif
Other DBs
NCBI-GeneID:
18258636
NCBI-ProteinID:
XP_006694978
UniProt:
G0S9I2
LinkDB
All DBs
Position
Unknown
AA seq
689 aa
AA seq
DB search
MSDIDDELLALAGGDVSEGEDAGEAMDISRDNSSPRHRDDAASDKDDDDDKDAPRRGTSA
RRAKRRSEDDEEEEEGEASPPGSPGSQMSAPMDESDSDSDTPQARTRGAAADDDNPYPVE
GLFKSLEEKARIMSMREIEREQILAERREENERIRQNRMLRQLKVNQEKEKEKEKGKDMS
KKRKAVDLDDDDDLHTGRRTDLRKSSRARTRADQSSDKMDSLRRAREERTSRKEAREREN
DRRRRDRDRDRDRSESSYGRSRSRSRDRYNRRPSSRDSDDYRRSKSRNRSRSPEPRESPP
ADMRDIERVRVGRSRFADYCFHPLFEQAMIGCFVRINIGPDPATRQEVYRMAVIKGFSKG
RPYAIPDHSGHPMVVDTYVKAAHGKAQRDWPFISCSNNKFTEAEFNRYKQVCLAEGVPFP
TKDELISKIDDINRMVNYVWTDEELNEKLRRVREMHAKYGPFQREAVQKQLELARARGDE
EAVARLQERLDSLEVPRLAFRTGSLFPQMKTSTTATTTTTTTTTTTTSSSSSSSHGGNGE
NGNGVGLSQQERLARKNLENRKYNSEMVRKAQLAERAKAREIELRTLRGEPVEDGDLSRR
VRTRVKFHYDPSQDSLVTPKKVVQSNGTSGTNTPANGENKEEVLPVIAKLKEQQWEQAKK
QGGMPSIHRPLMDDDIIGAIDLELDVDIN
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatatcgatgacgaactgctcgccctcgccggcggcgacgtgtccgaaggcgag
gatgccggcgaggccatggacatcagccgcgacaattcttccccacgccaccgtgacgac
gccgcgtccgacaaggacgacgacgatgacaaggatgcgccacgtcgaggtacttcagcg
cgcagggcaaagcgccgcagcgaggatgatgaagaggaggaggagggcgaggcctcccct
ccaggctctccaggctcgcaaatgtcggccccgatggacgagtcggactccgattccgac
accccgcaagctcgtacccgcggcgcggctgctgacgatgacaatccctacccggtcgaa
ggcctgttcaagagtctcgaagagaaagcacgtattatgagcatgcgcgagatcgagcgt
gaacagatcctcgccgagcgccgcgaggagaacgagcgtatccgccaaaaccgcatgctt
cgccagctcaaggtcaaccaggagaaggaaaaggagaaggagaagggaaaagacatgagc
aagaagcgcaaagctgtcgaccttgacgacgacgacgatctccacacaggtcgccgtacc
gacctccgcaagtcatcccgggcccgcacccgcgccgatcagagcagcgacaagatggat
tccctgcgccgtgcccgcgaagagcgcaccagccgcaaggaggcccgcgagcgcgagaac
gatcgccgtcgtcgcgaccgcgaccgcgaccgcgaccgctcagaatcatcgtacggccgc
tctcgtagcaggagccgcgacaggtacaaccgccgtccgagcagccgcgacagcgatgac
tatcgtcggtccaagtcccgcaacaggtcgcgcagtcctgagccgagggagagcccgccg
gctgacatgcgggatattgagcgtgtgcgtgttgggcgcagtcggtttgcggattactgc
ttccaccctctcttcgagcaggctatgatcgggtgttttgtgaggattaatattgggcct
gatccggccactcgtcaggaggtgtaccgcatggcggttattaagggcttctccaagggc
cgtccgtacgccatccccgaccactccggccatccgatggtggtcgacacttacgtcaag
gccgcccacggcaaggcccagcgggactggccctttatcagctgctctaataacaagttc
accgaggccgagttcaaccgctacaaacaagtctgcctcgccgaaggtgtgcccttcccc
acgaaagacgagctcatctccaaaatcgacgacatcaaccgcatggtgaactacgtctgg
acggacgaagaactcaacgagaagctccgccgcgtgcgagagatgcacgccaaatacggc
ccctttcagcgcgaagcggtgcagaaacagctcgaactggcccgcgcccgcggtgatgag
gaggccgtcgcccgcctgcaggagcgtctcgatagtctggaggtaccacggctggctttt
aggacgggaagtctgttccctcagatgaagacctccactactgccaccaccaccaccacc
accaccaccaccaccactacttcctcttcctcttcctcctctcacggcgggaacggggag
aatgggaatggggttgggttgtcgcagcaggagaggctggcgaggaagaatttggagaat
aggaagtacaactctgagatggtgcgcaaagcacagcttgcggagcgggcgaaggcccgg
gagatagaactgcgcactttgaggggggagcccgtcgaagacggggacttgtcccgccgt
gttaggaccagagtcaagttccattatgacccgtcgcaggactcgctggttacgccaaag
aaggttgttcagtctaacggaacgagtggcacgaatacaccggcgaatggggagaacaag
gaggaggtgctgccggtgattgccaagctcaaggagcagcagtgggagcaggccaagaag
cagggtgggatgccgagtattcatcggccgttgatggatgatgatatcattggggcgatt
gatttggagttagatgtggacatcaactaa
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