Thermochaetoides thermophila: CTHT_0047830
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Entry
CTHT_0047830 CDS
T03100
Name
(RefSeq) farnesyl-diphosphate farnesyltransferase-like protein
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
cthr
Thermochaetoides thermophila
Pathway
cthr00100
Steroid biosynthesis
cthr00909
Sesquiterpenoid and triterpenoid biosynthesis
cthr01100
Metabolic pathways
cthr01110
Biosynthesis of secondary metabolites
Module
cthr_M00102
Ergocalciferol biosynthesis, FPP => ergosterol/ergocalciferol
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
CTHT_0047830
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
CTHT_0047830
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cthr01006
]
CTHT_0047830
Enzymes [BR:
cthr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
CTHT_0047830
Prenyltransferases [BR:
cthr01006
]
Terpene biosynthesis
Squalene/phytoene synthase
CTHT_0047830
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
18258821
NCBI-ProteinID:
XP_006695148
UniProt:
G0SAU6
LinkDB
All DBs
Position
Unknown
AA seq
431 aa
AA seq
DB search
MVAAKQLVYFLLHPNELRNIIQWKVWHQPVHARDPSKESETQKQCFYYLNKTSRSFAAVI
QELNPELLMPVCLFYLVLRGLDTIEDDMTIDVKKKEPLLRSFHDIIEQDGWTFHENGPNE
KDRELLVHFDVVITELKKIKPEYYEIIKDITKKMGDGMADYALNAEHNINGVSTVPDYEL
YCHYVAGLVGEGLTRLFVKSGLATPKLMDRPELTESMGQFLQKTNIIRDVHEDWLDKRRF
WPKEIWSKYVDKWDDLFDPKNREKALHCSSEMVLNALKHAEECLFYMAHIRDQSVFNFVA
IPQSMAIATLELVFRNPAIFERNVKITKGDACRLMIESTQNLRVIEQFIETLFPSQDPNK
IAAEKINGMDAWETFYLALSVFGAIGVMTVLSVGIAYLLGAQLDDFFKNLDQALGGSVKP
ITTATVEHAEL
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggtggccgctaagcagctcgtctacttcctcctccaccccaatgagctgaggaatatc
atccaatggaaggtctggcaccagcctgtccatgctcgcgacccttccaaggagagtgaa
acccagaagcaatgtttctactacctgaacaagacgtcgcggtcattcgctgccgtcatc
caagaactcaaccctgagctgctgatgccagtatgcctattctatctggtattgcgcggc
ctggacaccattgaggatgacatgaccatcgacgttaagaaaaaggagccgctgctgcgc
agcttccacgacatcattgagcaggatggctggacgttccacgagaatggcccgaacgaa
aaggaccgggaactcctggtgcacttcgacgtcgtcattacggagctgaagaagatcaaa
ccagagtactacgagattatcaaggacatcaccaagaagatgggcgacggtatggccgac
tacgcactcaacgccgagcacaatatcaacggcgtctcgacggtccccgattatgagctg
tactgccactacgtggctggtctggtgggcgagggcttgacaaggctgttcgtcaagagc
gggttggccactcccaagctgatggaccgccccgagttgaccgagagcatgggtcagttc
ctgcagaagaccaacatcatccgcgatgttcacgaggactggctcgacaagcgccggttc
tggccgaaagagatttggagcaagtatgttgacaagtgggacgacctgttcgaccccaag
aatcgtgagaaggcgttgcactgcagctctgagatggttctgaatgctcttaagcacgcc
gaggagtgcctcttctacatggcccacatccgcgaccagagtgtgttcaactttgtcgcg
atcccccaaagcatggctattgctacactcgagctggtcttccgcaacccggccattttc
gagcggaatgtcaagatcaccaagggcgacgcttgccgcttgatgatcgagtcgacacag
aatctgcgcgttatcgagcaattcatcgagactctcttccctagccaagaccccaacaag
atcgccgccgaaaagatcaacggcatggacgcctgggagactttctacctggctctgtcc
gtctttggcgctattggtgtcatgactgttttatcggttggcattgcttatctactgggc
gcacaactcgacgacttcttcaaaaacctcgaccaggcgcttggcgggagtgtcaagcct
atcacgacagccaccgtcgagcacgccgaactgtga
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