Thermochaetoides thermophila: CTHT_0049000
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Entry
CTHT_0049000 CDS
T03100
Name
(RefSeq) putative coatomer complex protein
KO
K05236
coatomer subunit alpha
Organism
cthr
Thermochaetoides thermophila
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cthr04131
]
CTHT_0049000
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cthr04147
]
CTHT_0049000
Membrane trafficking [BR:
cthr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
CTHT_0049000
Exosome [BR:
cthr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
CTHT_0049000
Exosomal proteins of bladder cancer cells
CTHT_0049000
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
TPR_COPA_B
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_RFWD3
ANAPC4_WD40
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_Nup120_160
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
TPR_IFT80_172
Motif
Other DBs
NCBI-GeneID:
18258938
NCBI-ProteinID:
XP_006695261
UniProt:
G0SB59
LinkDB
All DBs
Position
Unknown
AA seq
1212 aa
AA seq
DB search
MQSSTGMLTKFESKSSRAKGIAFHPKRPWILVSLHSSTIQLWDYRMGTLIDRFEEHDGPV
RGVDFHKTQPLFVSGGDDYKIKVWSLQTRRCLFTLNGHLDYVRTVFFHHELPWIVSASDD
QTIRIWNWQNRSLRHNHYVMCAQFHPKEDLVVSASLDQTVRVWDISGLRKKHSAPTSMSF
EDQMARANANQTDMFGNTDAVVKFVLEGHDRGVNWVSFHPTMPLIVSAGDDRLIKLWRMS
ETKAWEVDTCRGHFQNVSGCLFHPHQDLILSVGEDKTIRVWDLNKRTAVNTFKRESDRFW
VIAAHPEINLFAAGHDNGVMVFKLERERPASAVYQNTLFYITKDKCVKSYDFQKNIESPT
LLSLKKLGSPWVPPRTLSYNPAERSVLVTSSADGGVYELINLPRDGSGAIEPTESKRGQG
NSAVFVARNRFAVLNTSTQTIDIKDLSNNTTRSFKPPIGTTDIYFGGTGNLLILTPTVVY
LYDIQQKKTTAELAVNGVKYVVWSNDGLYAALLSKHNVTIVTKNLEQVSSLHETIRIKSA
TWDDAGVLLYSTLNHVKYTLLNGDTGIVRTLDQTVYLVRVKGRNVYCLDRAAKPRILQID
PTEYRFKLALVKRNYEEMLHIIQNSSLVGQSIIAYLQKKGYPEIALQFVQDPATRFELAI
ECGNLEVALEVAKELDRPKLWTRLSTEALAHGNHSIVEMCYQKLKHFDKLSFLYLTTGDN
SKLARMARIAEHRGDVTSRFQNSIYLGDVQDRIQMFKEIDLYPLAYMTAKSNGLEEECQA
ILEATGLTEEQLNLPTFGEPLTPPKPVVPTYKANWPTKATSQSVFEQALLGQVEALTLED
ERAAANVEEGEEEAVGKRDLIANVDEDGDTAGWDIGDDIVAEVEEAIVTVDGAETGGAAS
SEADLWARNSPLAVDHVAAGSFETAMQLLNRQVGAVNFAPLKPRFLEVYQASKTYLPASA
GLPPLINYVRRTVEETDPRNVFPIIPRDLEYLAANDLQRGYEAMKANKLEDGLKIFKGIL
HAVLINAVGSENEVAEARKLITSAREYVVAMSIELGRRALGPQDVVSKDPQLLKRSLELS
AYFTIPKIEVLHRQLTLLSAMNWAMRNKNYNSALSFANRILANGVVAKFLESARKTKAQC
ERNPHDAVEIEFDQFAEFEICAASHTPIYSGTAYEECAFDGAKYHTKYKGTVCVVCEVCE
VGKHGSGLKLFA
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcctctacgggaatgctcaccaaattcgagtccaagtcgtcccgcgcgaaaggc
atcgcattccacccaaagagaccatggatcctcgtctcacttcattcttcgaccattcag
ctgtgggattaccgcatgggtaccctcattgaccgcttcgaagagcacgatggtccagtc
cgcggtgtcgacttccacaagacgcagcccctctttgtctcaggcggtgatgactacaag
atcaaggtctggtctctccagactcgccgttgcctgttcaccctgaatggacacttggat
tacgttcgcaccgtcttcttccaccacgagctgccctggattgtcagtgccagcgacgac
cagacgatccggatatggaactggcagaaccgctctttgcgccacaaccactacgtcatg
tgtgcccagttccaccccaaggaggatctcgttgtttcggcctcccttgaccagaccgtt
cgtgtgtgggatatttctggcctccgcaagaagcactctgcccccacctcgatgtccttc
gaagaccagatggctcgcgcgaacgcaaatcaaaccgacatgtttggtaacactgatgct
gtggtcaagttcgtcctcgaaggtcacgacaggggtgtgaactgggtttctttccacccc
actatgcccctaattgtttctgccggcgacgaccgcctcatcaagctgtggcgtatgagc
gagaccaaggcttgggaggtcgatacttgccgtggccatttccagaacgtcagtgggtgc
ctcttccacccccaccaagacctcattctctctgttggcgaagacaagaccatccgggtc
tgggacttgaataagcggacagcagtcaatacgttcaagcgtgagagcgacaggttctgg
gttattgctgctcaccctgagatcaaccttttcgctgctggccatgataatggtgtcatg
gtgtttaagcttgagcgcgagagaccagcgtcggccgtttatcaaaacactctattctac
atcactaaggataaatgtgtgaagtcttacgatttccagaagaatattgaaagcccgact
ctcctctcgctcaagaagcttggcagcccttgggtcccccctcgcacactctcctacaat
ccagccgagcggtccgtgttggttacgtcctctgcagatggcggagtttacgagctcatc
aaccttcctcgtgacgggtctggtgccatcgagccaacagaatctaagcgtggacagggc
aactcggccgtcttcgttgctcgcaatcgcttcgctgtcttgaacacctctacccagact
atcgacattaaggatttaagcaacaacacaacaaggtcattcaagccgcccattggtact
accgacatttattttggtggcaccggcaaccttctcatccttaccccgacggttgtttat
ctgtacgacatccagcaaaagaagacgacggcagaacttgcagtgaacggcgtcaagtat
gtggtgtggtccaatgatggcctgtatgctgctcttctcagcaagcacaacgtgaccatt
gtcaccaagaacctcgagcaagttagcagtttgcatgagaccatccggatcaagagcgcc
acctgggatgatgcgggtgttcttctctactcgaccttgaatcacgtcaaatataccttg
ctcaatggcgacaccggcattgtccgcacccttgaccagacagtttatctcgtccgtgtc
aagggtcgtaatgtctactgccttgaccgcgctgctaagccccgaattcttcagattgat
ccgacggaataccgtttcaagctagctcttgtcaagcggaattacgaagaaatgcttcac
attatccaaaattcaagtttggttggccaatctattattgcttacctgcagaagaagggt
tatccggagattgctctccagttcgtgcaagacccggctacgcgcttcgagctcgccatt
gagtgcggcaacctcgaagttgcgctggaagttgccaaggaactggaccgtcctaagctc
tggaccaggttaagcactgaggctcttgctcacggcaaccatagcattgtggagatgtgc
taccagaaactcaagcactttgataagctgtcgttcctctaccttaccaccggtgacaac
tccaagctggctaggatggccagaatcgcagagcaccgcggggatgttacgtcaaggttc
cagaactccatttacctcggggacgttcaggatcggatccagatgttcaaggagatcgac
ctctatcctctcgcgtatatgacagctaaatccaacggactggaggaagaatgccaagcc
atcctcgaggccactggtctcaccgaggagcaactcaacctccctacttttggcgagccc
cttacaccccctaagcctgtggtgccgacgtacaaggcgaactggccaactaaggcaaca
tcccaatccgtctttgagcaggcccttcttggccaggttgaggccttgacgttagaggat
gagcgcgccgctgctaatgttgaggaaggtgaggaagaagctgttggcaagcgggatctc
attgccaatgtcgatgaggacggggatactgccggttgggatataggtgatgacatcgtc
gccgaggtggaggaggctatcgttactgttgacggagctgagaccggcggtgctgccagc
agcgaagctgacctgtgggcccgcaattcgccgcttgcagtcgatcacgtcgccgcaggc
tcatttgagactgccatgcaactcctcaaccgccaggttggtgcagtcaactttgcaccc
ctcaagcctcggtttttggaggtttaccaagcctccaagacatatctgcctgcgtccgca
ggtctccctccgcttatcaattatgtgaggcggactgttgaggagacagatcctcggaac
gtctttccgattatcccgagagatctggaataccttgccgctaatgacttacaacgcggc
tatgaggccatgaaggccaataagctggaggatggtctcaagattttcaagggtatcctt
cacgccgtgctcatcaatgctgtgggcagcgagaacgaagtggctgaggccaggaaactc
attacctctgctcgcgaatacgtcgtggccatgtccatcgagctcgggagaagggctctc
ggtcctcaggacgtcgtcagcaaagatcctcagctcctcaagaggagcctggagctctcg
gcttacttcacaatccccaagattgaggtgctgcatcgccagctaacgctgctcagtgcc
atgaactgggctatgcgcaacaagaactacaactcggcgttgagcttcgccaacaggata
ttggcgaacggtgtggtagctaaatttttggagagtgcccgcaaaaccaaagcacaatgc
gagcgtaaccctcatgatgcggtcgagattgagttcgaccagtttgccgagttcgaaatc
tgcgcggccagccacactcccatctatagcggcacggcctacgaagaatgcgcgttcgac
ggtgccaagtaccacaccaagtacaagggtaccgtgtgcgtcgtctgcgaggtgtgcgag
gtgggcaagcacggtagcgggttgaagctgtttgcttaa
DBGET
integrated database retrieval system
