Thermochaetoides thermophila: CTHT_0050900
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Entry
CTHT_0050900 CDS
T03100
Name
(RefSeq) hypothetical protein
KO
K12597
protein AIR1/2
Organism
cthr
Thermochaetoides thermophila
Pathway
cthr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CTHT_0050900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cthr03019
]
CTHT_0050900
03016 Transfer RNA biogenesis [BR:
cthr03016
]
CTHT_0050900
Messenger RNA biogenesis [BR:
cthr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
CTHT_0050900
Transfer RNA biogenesis [BR:
cthr03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
CTHT_0050900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
18259128
NCBI-ProteinID:
XP_006695433
UniProt:
G0SD87
LinkDB
All DBs
Position
Unknown
AA seq
642 aa
AA seq
DB search
MAEPTQSDNTANQDAVDVVSTPKANVDPSSSPLASTQKRSADDAGIDDDDSGSTSQQSPK
EDESTHDVGDDKASEALAQAKRVKRGSPSGTLGSPKPHVGWNRGVTNNLRTSFGGGFSRL
NTLRKPPTAPASQNEQDATPQLKEERNAKFEEGSSSASRPDAPALSTKEIKEVQTIKLTQ
VQTVPQDDQRSLTAPESVQEALQFSQAPTATTATSTTSQEAAAWIQPPPRPAVDFENIRN
KDQQGWEGIFLSWCKSLNYFNNNSIRASTARERHRILETYFTWVGSIQGISKAKASSARR
AAVEFAQSHQEQLAEWFLQTSTPEIEPTMGSLDEPKGPEAIENGADTVNNQASLTNATIT
DMEIEHRAHYFPGAEIHETFCIVCASSGHSSNHCPELTCKHCQADWHRPWQCPTRQRCGK
CKQLGHHKRQCREKLILPVDERDCAHCASRDHQDHQCPTLVKSFIVREGEESRLRKVQAV
PIYCYSCGAKGHYGPECWVNRNQPRNADPWAASYSVANAARYVDPASTEIAVAYQSARGS
TQPQEDDAGRPNLGHSIVPQRHIVFEDDEDDDEDEGFIRPLVSRNQPGAGNRAGQIRIAG
TASAGGRGTAGLPPRPPHPAQQQLGQQHGGGGGSRKKRRGGR
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacccacgcagtccgacaacacagccaaccaagatgcagttgatgtcgtgagc
acaccaaaggcgaacgttgatccgagctcatccccgctagcatcaacccagaagcggtcg
gctgacgacgccggcatcgacgatgatgactcaggatccacaagccagcagagtccaaag
gaagacgagagcacgcacgatgtaggagacgacaaggcatccgaagctttggcccaagcc
aagagggtcaagcgggggagcccaagcggtaccctaggttctcccaagccacacgtggga
tggaatcgcggggttacgaacaacttgcgcacttctttcggtggcggcttcagcagactg
aacacattgcgaaagccccctacagctcccgcatcgcagaatgagcaggacgcaacccct
cagcttaaggaggagcgaaacgcgaagttcgaggaaggctcttcgtccgctagtcggcca
gatgccccggctttgtctacgaaagagatcaaggaggttcaaacaataaagttgactcaa
gttcagacagtgccgcaggacgaccagcggtccttgacagccccagaatcagttcaagag
gccctgcagttttcgcaggctcctacggcaaccacagcaacctctacgacaagccaggaa
gcagcggcatggatacaacccccgcccaggccggccgtggactttgagaacatccgcaac
aaagaccagcaaggttgggagggtatctttctttcttggtgcaagtctctcaattatttc
aacaacaactccatccgtgctagtactgcgcgtgagcgccatcgcattctcgagacctac
ttcacttgggtcggttctatccaaggcatttccaaagccaaagcatcctctgcgcgccgc
gctgcagtcgagttcgcgcaatctcatcaggaacaactcgccgagtggtttttgcaaacc
tcgactcctgagatcgagcccaccatggggtctcttgacgaacccaagggccccgaggcc
atcgagaacggcgctgataccgttaataaccaggcttccctcaccaacgccacaatcacc
gacatggagattgagcaccgcgcacactacttcccgggagccgagatccacgaaaccttc
tgcattgtctgcgcctcctccggtcactcgtccaaccactgtcccgaattgacctgcaag
cactgccaggccgactggcaccggccctggcaatgcccgacgcgccagcgctgcggcaag
tgcaagcagctgggccaccataagagacagtgccgggagaagctcatcctgcccgtcgac
gagcgcgactgcgcccattgcgcgtcgcgcgaccaccaagaccaccagtgcccgactctg
gtcaagagcttcatcgtccgcgaaggcgaagagtcccgccttcgcaaagtccaggccgtg
cccatttactgctattcgtgcggcgccaagggccactacggccccgaatgctgggtgaac
cgcaaccagcccaggaacgctgacccctgggccgcctcctacagcgtggccaacgccgcg
cggtacgtcgacccggcttcgaccgagatcgctgtcgcataccaaagcgcgaggggctcg
acccagccccaggaggatgatgccggccgccccaacctcggtcactccattgtgcctcaa
cggcacattgtttttgaggacgatgaggacgatgacgaggacgaggggttcatccggccc
ctcgtctcgaggaaccagcccggggccggcaaccgcgctggccagatcaggatcgctggg
actgccagtgccggcggcaggggcactgccgggctgccgccgcgcccgccccatccggct
caacagcagctaggccagcagcatggcggcggcggcggcagccggaagaagcgccggggt
ggccgttag
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