Thermochaetoides thermophila: CTHT_0054390
Help
Entry
CTHT_0054390 CDS
T03100
Name
(RefSeq) hypothetical protein
KO
K14306
nuclear pore complex protein Nup62
Organism
cthr
Thermochaetoides thermophila
Pathway
cthr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CTHT_0054390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cthr03019
]
CTHT_0054390
Messenger RNA biogenesis [BR:
cthr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CTHT_0054390
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
COG6_N
DUF948
ATG17_like
MG280
CENP-Q
DUF724
Motif
Other DBs
NCBI-GeneID:
18259477
NCBI-ProteinID:
XP_006695774
UniProt:
G0SBQ3
Structure
PDB
PDBj
LinkDB
All DBs
Position
Unknown
AA seq
678 aa
AA seq
DB search
MSFTFGQPSTSGASGQSNTSTAPASGGLFGSTTGSSTPAFSFGNTSGTQSGSLFGGATTG
QKTSLFGNTSSTTPAGTPATSLFGQSTSSSSGPSLFGNASKPSGNLFGNTSTSAAGSSTP
AGTPSLFGSKTATTSAGASSTTPAATAGSGSLFGSTTATTQGSSTPTSTGLFGGSSTASK
SLFGSTTTPATGTSGSQTTPAKPLFGSFGSTTPAGAPPTDATKTAGLFGNLSKPATTGTS
TPTLFGSTSATTQGQSSTPLFGAKPAETSTTTAASGAATPATSAPASTTPTLFGGATLTS
SAPAASTSTSTATASTPAATKPLFGATATTSAPGSSTTTATPGLFSTTPATTAAAGSSTA
TSTLFGTKPATTTAAAASSTPAATSTPSLFGSKPASTTAPASGTPTTTTAPASTSAPATT
TAAPTSGASATASTTTAGQDAKTTTAGLGASTVGPQSQLPRLKNKTMDEIITRWATDLAK
YQKEFKEQAAKVMEWDRLLVENGEKIQKLYTSTYEAERASNEIERQLSNVESQQEELTAW
LDRYERELDELYAKQMGSAAGEQAAGPDQERERTYKLAEKLTDQLDEMGKDLAKMIKEIN
DMSNTLSKGSKPDDPLTQIVRVLNGHLAQLQWIDTNAAALQAKVAAAQKAAGSMGANVPG
TETDAAESFYRSYRGGLK
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcacgttcggtcagccatccaccagcggcgcctcaggccagtccaatacgtcg
actgcccccgcgagcggcggtctcttcggcagcaccactggttcgagcacgccagccttc
tcattcggcaacacgtccggcacgcagtccggcagcctgtttggcggtgcaaccacaggc
cagaagacaagtctcttcggcaacacatcgagcactaccccagcaggcacgccagctacc
tcgctttttggccagagtaccagttcttcgtcgggcccaagcctgtttggcaatgccagc
aagccgagcggcaacctgtttggtaacacttctacctctgcggctggcagctcgaccccc
gctggcacgccgagcctgttcggcagcaagactgccacaacatctgcgggagcctcgtca
acgacgccagcggccacagcgggtagcggcagtctcttcggctcgacgacagccaccacc
cagggctcttctactcctacctcaaccggtctttttggcggcagttccactgctagcaag
tccttgtttggctcaaccaccactcctgccacgggcacgtccggctctcagacgaccccg
gcaaagccacttttcggtagctttgggtcgactaccccggcgggtgcccctccgaccgat
gccaccaagactgctggcctcttcggcaacttgtccaagccagcgaccaccgggacttct
acgcccactctctttgggtcgacttctgccaccacgcaaggccagtctagtacacctttg
tttggggctaagcctgcggaaacatcgactaccactgctgcttctggggctgccacacct
gctacctctgcgccggcctcaacaacgcccacgctgttcggaggcgccactctcacgtct
tctgctcccgctgcttctacgagtacatccacagcaacagcgtcgactcctgccgcgacc
aagcccttgtttggtgccactgcaacgaccagcgctcctggctcatcaactacaacggcg
acacccgggttgttctcgacgactcctgctaccactgccgctgctggttcaagcacggct
acctcgactttgtttgggaccaagccggctaccaccactgcagctgccgcctcctctact
cctgcagcgacatcaacgccaagcctctttggaagtaagcccgcgtctaccacggcgccg
gcttctggcactccgacgaccaccaccgcacctgcttctacctctgcccctgcgacaacg
accgccgccccaacctcaggggcgtcagcgactgcatcaacaaccacagctggtcaggat
gcaaagactacgaccgccgggcttggtgcttctaccgtcggcccccagtcgcagctgccc
cgtctgaagaacaagacaatggacgagatcatcacgcggtgggcaaccgacctggccaag
taccaaaaggagttcaaggagcaggcggcgaaggtgatggagtgggatcggttgctggtc
gagaatggcgagaagatccaaaagctgtataccagcacctatgaggccgagcgcgcaagc
aatgagattgagcgccaactatctaatgtcgagagccagcaggaggagctaacggcctgg
ctggatcgctacgaacgggagctggatgagctgtacgccaaacagatgggctctgccgct
ggcgaacaggctgctggtccggaccaggagcgcgagcgcacttacaagctggccgagaag
ctgacagatcagctggatgagatgggcaaggacctggccaagatgataaaggagatcaac
gacatgtccaacactctcagcaagggcagcaagcccgatgatccattgactcaaatcgtg
cgggtcctgaatggacaccttgcccagctgcagtggatcgacaccaatgccgctgctctc
caagcaaaggttgccgcagcgcagaaggctgctggcagcatgggcgccaacgtccctggc
acagaaaccgatgctgccgaaagcttctacaggtcataccggggtgggctcaaatga
DBGET
integrated database retrieval system
