Thermochaetoides thermophila: CTHT_0054450
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Entry
CTHT_0054450 CDS
T03100
Name
(RefSeq) hypothetical protein
KO
K27103
serrate RNA effector molecule
Organism
cthr
Thermochaetoides thermophila
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cthr03019
]
CTHT_0054450
Messenger RNA biogenesis [BR:
cthr03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
CTHT_0054450
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SERRATE_Ars2_N
ARS2
DUF4187
Motif
Other DBs
NCBI-GeneID:
18259483
NCBI-ProteinID:
XP_006695780
UniProt:
G0SBQ9
LinkDB
All DBs
Position
Unknown
AA seq
908 aa
AA seq
DB search
MDPHHYRDSVRSPGDRDRGWSSRDDRLKDERGDRDRDYYRSRSPGTERSRRRSRSPVAVD
RYEPRGRGRDDYAAPRDRDDRRRIGSPPANIDRYVPGQDPLPPPPLTNPIPDPLKLPYQV
GFSYFGEWWRANERIKEEKERLRTGRRREPERVRTQEDREKEKAKIQAAYDAYKEELQAK
MAQSFVKQHKEDQWFRERYVPEVRDALRQKLNEMRREAYARWEQDLASGVFDDFTLEGIP
KNESNGAGGVVEKEEGETTAANEVLGVGDLVPANPNEIRDESLYQPTLLIKTIAPSVSRQ
NLENFCKEHLGEGEGGFKWLSLSDPNPSKRFHRIGWIILNPASEPPAEADPEEAGKDEQE
DGESKPKPRTIAEKALEAINGKTVKDEQRGDFTCHVGVHNPPANPRKKALWDLFSHPDRI
RKDLQLATELVNKYESDFGSDFNAVLQIEEYVEKLRSEGKLEPAVPTSPVKKTKKERIVD
STDDALDKEVEEGDASIVGGEDEDEDEGVVDDEVDDIDLLVTKKKLDLTIEYLRRVFNFC
FFCVFESDSVHELTRKCPGGHLRRPRSTLSSAAKIVAQASAAGEPFPSRKRKESEEVEEG
EATEPEQRKFRASSKTEQQLQRAYNWVKTFEDKINQILHPESVDIRKLGGKPVEDAVHDE
LSKYVKQEDEHKWRCKIPECTKLFKEEHFWRKHVEKRHTEWLDKLKEEFELINAYVLDPA
HIAPSRTDANSNGHFPQPNGQQPTGTPRGFNLQNYAMNNMINFAGFPMSMFQQNMLGGAN
PLGSQAWHHAGAASAGGSGGHDDRGGGGPAGPIRRGGPAGGAGSSGRYNSRVGPYDRRGG
RWGGGEAGGMNGGGGRGGRGGGGFSNRWGDGVAGGGAMAPREAVQGRTIKSYEDLDQVSG
GGGGELNY
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggacccgcatcactaccgcgattcggttcgctctcctggcgaccgcgaccgaggctgg
agcagccgagatgatagactcaaggatgagagaggtgatagggaccgagactactatcgc
agtcgctctcccggtacagagcgtagccggcgccgttcgcgatctccagttgctgttgat
cgctacgaaccgagaggacgtggtcgcgacgactacgctgccccccgcgatcgcgacgat
cggcgcagaattggctctcctccggccaacatcgatcgctatgtccctggccaggatcct
ctgccgccccctccgctaaccaatccgatccccgatcctttgaagctgccgtatcaagtc
ggcttttcatactttggtgagtggtggcgggcaaatgagagaattaaggaggagaaagag
cgactcaggactggccgccgtcgcgagcccgagcgcgtccgcacgcaagaggaccgtgaa
aaggagaaggccaagatccaggctgcttacgacgcctacaaagaggagcttcaagccaag
atggcccaaagcttcgtcaagcagcataaagaggatcagtggtttcgggagcgttatgtc
cccgaggtcagggatgctcttcgacagaagctcaatgagatgcgccgcgaggcttacgcc
cgctgggagcaggatcttgccagcggtgtctttgatgactttactttggaaggtattcca
aagaatgagagcaacggcgccggtggtgtggtggagaaagaagagggcgaaactaccgcc
gcaaatgaagtgctcggtgttggcgatctggttcctgccaatccgaacgagattagagac
gagagcctgtatcagcctactctgctgatcaagacgatcgccccgtctgtcagccgccag
aatctggaaaacttctgcaaggaacaccttggtgagggtgagggtggcttcaaatggcta
tctctcagcgatcccaaccccagtaagaggtttcaccgtattgggtggatcatcttgaac
ccagcttctgagccgcccgccgaggccgacccggaagaggccggcaaagacgagcaagag
gatggagagtctaagcctaagccccggaccatcgccgagaaggccctggaagccatcaat
ggcaaaactgtcaaagatgagcagcgcggtgactttacttgtcatgtcggtgtccacaat
cctcctgccaaccccaggaaaaaggccctgtgggatctgttttctcatccggatcgcatc
cgcaaggatctccagctcgctactgaactagtcaacaagtatgagagcgactttggctcc
gacttcaatgccgttctgcaaattgaggagtatgtcgagaagctgcggtcggaagggaag
cttgaacctgcggtgcctacatcccccgttaaaaagaccaagaaggagcgcatcgtcgat
agcactgacgatgctttggacaaagaggtcgaggaaggggacgcttctattgtagggggc
gaggatgaggatgaagatgagggggttgtcgacgacgaggttgacgatatagacctgctg
gttaccaagaagaagttggatctcaccatcgagtatctccgccgtgtcttcaacttttgc
ttcttctgcgtctttgagagcgactctgttcatgagttgacgcgcaaatgccccggcggc
catcttcggagacctcgcagcacactatcttctgccgcaaaaattgttgctcaagcgagc
gctgccggcgagcccttcccatcaaggaagcgcaaggagagcgaggaggtggaggaaggc
gaagcgaccgagccggagcagcgcaagtttcgtgcctcgtccaagactgagcagcagctc
cagcgggcgtacaactgggtcaagacattcgaggacaagatcaaccagattctccatccc
gaatcggtcgacatccgcaagcttggtggcaaacctgtcgaggatgctgttcacgatgag
ctgagcaagtatgtcaagcaggaggacgagcacaagtggcgctgcaagatccccgagtgt
accaagctattcaaggaggagcatttctggcgcaagcatgtcgaaaagcgccacactgag
tggctcgacaagctcaaggaagagttcgagcttatcaacgcctatgttctcgaccctgcc
catattgctccttctcgcacggatgcaaactccaacgggcatttcccccagcctaacggt
cagcagccgacgggcaccccgcggggcttcaacctccagaattatgccatgaacaacatg
atcaacttcgcgggcttccccatgtccatgttccagcagaatatgcttggcggcgcgaat
cccttgggtagtcaggcatggcatcatgccggagcggctagtgcaggcggttccggtggc
catgacgaccgcggtggtggcggcccggctggtccaatccgtcgtggcggtcctgcgggc
ggggctggcagtagcggccggtacaacagccgtgttggaccgtacgatcgccgtggtggt
cgctggggcggcggtgaggcaggtggtatgaacggcgggggtggccgtggcggtcgcggc
ggcggaggcttctcgaacagatggggcgacggtgttgctggaggcggggctatggcgcca
cgcgaggctgtccagggccgcacgatcaagagctacgaggatctggatcaggtatcggga
ggtggtgggggagagttgaactattga
DBGET
integrated database retrieval system