Thermochaetoides thermophila: CTHT_0054790
Help
Entry
CTHT_0054790 CDS
T03100
Name
(RefSeq) hypothetical protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
cthr
Thermochaetoides thermophila
Pathway
cthr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CTHT_0054790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cthr03041
]
CTHT_0054790
Spliceosome [BR:
cthr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
CTHT_0054790
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
PRP4
ANAPC4_WD40
NBCH_WD40
WDR54
Nbas_N
WD40_like
Motif
Other DBs
NCBI-GeneID:
18259517
NCBI-ProteinID:
XP_006695813
UniProt:
G0SBU2
LinkDB
All DBs
Position
Unknown
AA seq
531 aa
AA seq
DB search
MMHPARKAYVEDAEMEDRGGVTLDNIPIDHDYEIPATAAGIPAEKASALLSQFERKRLAA
SIAVPTKDEQVRAKLRELGEPITLFGEGPADRRDRLRELLTEQLQKAQKEGSQEGADVEM
KDAQKEEEEEADEQEEEFYSRGSEELLQARINIAQYSIPRAKRRIEFQKKEASIPLRTHV
KFRKEIKERLQGFELQGSQAAGDRHVSMVRISPNGKMVATGNWGGQVKLIDIPSLEHRQT
LRGHVNKISGLSWMPGATLPESNISEDTVNLASGGAEGNVLLWSLTKDTPLATLSGHAQR
VCRVEFHPSGRYVASASEDTSWRLWDVETTTELLLQEGHSRGVYAVAFNTDGSLLASAGL
DSIGRIWDLRSGRTVMILDGHTDGHIKPIYGLDWGADGHRVLTASADGWIKCWDVRKVQR
TGGIGAHTSTVADVRWFKGLDDPLLGTPPGEDERGNQIPKKSGTFIVSAGFDHKVNIFSA
DDWALVQSLAGHTGPVASADVSMDGRWIVSGGHDRTVKLWGRNDSAGMYGD
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgatgcacccggcgcgcaaggcgtatgtagaggatgcagagatggaggatcggggcggc
gtcactttggacaatatccccatcgatcatgattacgagattcccgctacggcagcaggt
attcctgccgaaaaggcctcggcactgctctcccagttcgaacgtaagaggctagcggcc
agcattgccgtgcctaccaaggatgagcaggtgcgggccaagctccgcgagctcggagag
cccataacgcttttcggcgagggcccggcagacaggcgcgacagactacgagagcttctg
acagagcagctgcagaaggcacaaaaagagggaagccaggagggggcagatgtggagatg
aaggatgcccagaaagaggaggaggaggaagccgacgagcaggaggaggagttttactcg
agaggctcggaggagttgcttcaagcccgcatcaacattgcccagtactcaatcccacgg
gcgaaaaggcgcatcgagttccagaagaaggaggcctcgatcccgctacgcacgcatgtc
aagttccgcaaagaaattaaagagaggcttcagggcttcgagttgcagggaagtcaagca
gcaggcgaccgtcatgtcagcatggtcaggatatctcccaacggcaagatggtggcaacg
ggaaactggggtgggcaagttaaattgatcgacattccctcccttgagcacaggcagacg
ttgcgaggccatgtcaacaagatcagcggcctttcctggatgcccggtgccactctacca
gaaagcaacatttccgaagatacagtcaacctcgcgtcaggcggcgccgagggcaatgtc
ctgctctggtctctcaccaaggacacgcccttggccacgttatccggacacgcacagcgc
gtatgccgtgtcgagttccatccgtcgggacggtatgtggcatccgcgtccgaggacacg
tcgtggcggctgtgggacgtggagacaaccacagagctgctgcttcaagaagggcattcg
cgcggcgtgtacgcggtggccttcaatacagatggatcgctcctggcgagtgcaggtctg
gacagcattggtcgtatctgggaccttcgatctgggcggacagtcatgatcctggacggg
cacacagatggtcacatcaaacccatctatgggcttgattggggtgccgatgggcaccgg
gtactgacagcatcggcagatgggtggattaagtgctgggatgtacgcaaagtacagcgg
acgggaggcattggtgcgcacacaagcacggtagcagacgtgaggtggtttaagggcctt
gatgatccactgctgggcacgccgccgggcgaagatgagaggggaaatcagataccgaag
aagtcaggcaccttcatcgtgtcggctggatttgaccacaaggtcaacatattttcggcc
gacgactgggccctcgttcaatcactagctgggcatacgggtccagtggccagtgcggat
gtgagtatggatgggaggtggattgtcagtggcggacacgatcggacagttaagctatgg
ggtcgcaacgactcggcgggcatgtacggcgactga
DBGET
integrated database retrieval system
