KEGG   Thermochaetoides thermophila: CTHT_0056140
Entry
CTHT_0056140      CDS       T03100                                 
Name
(RefSeq) putative splicing factor
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
cthr  Thermochaetoides thermophila
Pathway
cthr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cthr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CTHT_0056140
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cthr03041]
    CTHT_0056140
Spliceosome [BR:cthr03041]
 Complex A
  U2 snRNP components
   U2 related factors
    CTHT_0056140
 Complex B
    CTHT_0056140
SSDB
Motif
Pfam: zf-CCCH RRM_1 Torus zf_CCCH_4 SCRG1
Other DBs
NCBI-GeneID: 18259652
NCBI-ProteinID: XP_006695940
UniProt: G0SC69
LinkDB
Position
Unknown
AA seq 209 aa
MANFLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPAHDPK
CRMNEQQLQNHFDAFYEDIWCEMCKYGELEELVVCDNNNDHLIGNVYARFKYEEDAAKAC
EDLNSRWYAARPVYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSPELERELQL
ATKKWLKMKPRSRSPTRSPSPEPRRRYRD
NT seq 630 nt   +upstreamnt  +downstreamnt
atggccaacttcctcgcctcaatcttcggcaccgagcaagacaaggtcaactgctccttc
tactacaaaatcggcgcctgccgccacggcgaccgctgcagccgcaagcacgtcaagccg
tcctactcgcaaacgatactcatgccgaacctctatcagaacccggcacacgatccaaag
tgccgcatgaacgagcagcagctgcaaaaccacttcgatgccttctacgaggacatctgg
tgtgagatgtgcaaatacggcgagctcgaggagcttgtcgtctgcgacaacaacaatgac
cacttgatcggcaacgtgtacgctcgcttcaagtacgaggaggatgcggccaaggcctgc
gaggacctcaactcgaggtggtacgctgcgcgccccgtctactgcgagttgagtcctgta
acagattttcgcgaggcatgctgtcgactgaactctggcgaaggatgtgtgcgcggcggg
ttctgcaactttattcaccgcaagaatcccagtcctgagttggagcgcgagctgcaactg
gcgacgaagaagtggctcaagatgaagcctcgttcgcgcagcccgacgcgttcgccaagc
ccggagcctaggaggaggtatcgcgactga

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