Thermochaetoides thermophila: CTHT_0059890
Help
Entry
CTHT_0059890 CDS
T03100
Name
(RefSeq) hypothetical protein
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
cthr
Thermochaetoides thermophila
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cthr03021
]
CTHT_0059890
03036 Chromosome and associated proteins [BR:
cthr03036
]
CTHT_0059890
Transcription machinery [BR:
cthr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
CTHT_0059890
Chromosome and associated proteins [BR:
cthr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
CTHT_0059890
SLIK complex
CTHT_0059890
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Chromo
HTH_Hrp3
Helicase_C
CHD1-like_C
HDA2-3
ResIII
Cdh1_DBD_1
AAA_22
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
18260027
NCBI-ProteinID:
XP_006696307
UniProt:
G0SEW0
LinkDB
All DBs
Position
Unknown
AA seq
1722 aa
AA seq
DB search
MNAVTDIVVLPQAQLQSRASLTMSTSPDPGSADGHNIPSPDDSTIHATPVIRVQNDASDA
QSPQNDAPSPASADAVGSPDEGAEPEPAQEDEEMLSDSASNNDRADDGDFVAEPSPTSEH
SNNSGAAPRPASTSSRPAAKRKATSIMDDEYIRENPELYGLRRSSRPTQRRKIVESEDDD
ESSESDAAPARKTTKKRRVERSQPASKRGTPARQPSIDDSDSDTYGGAKARSFQKKARRQ
ELQGVQRWSSRRAAQVSAGTYQESDLEDEEDENMTPGYWAAEVEDNSPYIEKILRHRPKP
GVEITPDVTRHDFEYFIKWQGKSHLHNTWETTESVAGFRGFRRLENYFKKVVEYELDLQF
GGDEITPEQREQWMLDREREEEALEDYTKVERIVAVRDGDDGLQYFVKWKGLQYDECTWE
DASLIQSQAQDKIDQFYDRSTRSWQSDRKQSNPETRTRMMKLEKQPDYIKGGELREFQMK
GLNFLALNWTRGNNVILADEMGLGKTVQTVSFLSWLRNDRGQEGPFLVVAPLSVIPAWCD
TFNNWAPDLNYVVYLGPESARSIIRQYELFIDGNPKKTKFNVLLTSYDYILADADHLKPI
KWQVLAVDEAHRLKNRESQLYIKLNSFGIPCKVLITGTPIQNNLAELSALLDFLNPGKVL
IDDELEALSSADNKGTGDAEQDEARRQRTQEKLRELHQAIAPYILRRTKETVESDLPPKT
EKIIRVELSDIQLEYYKNILTRNYAALRDASGHKQSLLNIMMELKKISNHPYMFQGAEER
VLNGSTRREDQIKGLITSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDILGDYLRIRG
YQFQRLDGTIPAGPRRMAIQHFNAEDSEDFCFLLSTRAGGLGINLMTADTVIIYDSDWNP
QADLQAMARAHRIGQKKPVNVYRLVSKQTIEEEVVTRARNKLFLEYLTIQAGVTDAEGKA
LREKFKEKGLKFDEAKTAEDISMILKMRSQNLFEQTGNQQKLEQLDIDAILENAEVTKTD
IDDKINLSTGGIDWDNWMQVTDVKLDENALDWDQIIPADQLAAIKAEEEKKKHEEYLQKA
MEEAAPRKAALKSAKKSAEIERQERIKKRWREREAEDLEEQRALLTDPRRPLGEKETRNL
IRAFFRYGNFEEREEEIVHDARLTDRDRGYLKSIIDELIEVSKKAIEANNEKLREEEAKA
GKPLAKKDKKAVLVDFGEVRKINAETVIERPPQLKLLRRVLREHEKEHGDALSFRLPEAT
KAASYTCEWGAREDAMLLVGIDKYGFGAWTQIRDDPQLGMKDKFFLEEHRVDKKEERRRT
DDKTIQSPGAVHLVRRSEYLLSVLMAKYSNDENAKKAVENHHRSKKLLTNGIRRSEQNSV
SASPAPSMSKKPSQRDRDHHRSYSNANDRGTPRPDKRKYNDDYDDRDSKQRRLDSDAKHD
KKATSGKDQKEKPKLDPETMERLKRERARAVERFHELTKIPDDKIDPNDNVQVVWSILRP
LQENIERIIYSKERVPIAKERAKFLGAEIRAFGNFLRGLKEKNGPNFEGLEQQFWEFLSD
IWPLGDVKVSGKRLQKMYVSLAEADRQKEEEEKAKAKNPDLEDGEIPSDRDEPPRERDRD
QPSRRPPPSRDPYRDDRREQRHEERRNDLDRRASDVGSSDAKRRAYYDDDRLSFYRRRPD
LANNSRGSSNGGGGSGSSVPLRHHSSSSWHHSHSPPARRSPY
NT seq
5169 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctgtaactgacatcgtcgtcctcccgcaggcacagctgcagagccgcgcttct
ctcacaatgtcaacatcaccggatcccggttcggccgatggccataatatccctagccca
gacgactctactattcatgccactcccgtaattcgagtccaaaacgacgcttcagatgct
cagagcccacaaaatgacgcgccgtcgcccgcgtcggccgatgccgtcggctcgccggac
gagggtgccgaacccgagccggcccaggaagacgaagagatgttgtctgactcggccagc
aacaatgaccgggccgacgatggggacttcgtcgccgagcccagcccaacatctgaacac
agtaacaacagcggcgccgccccgcgtcctgcgtccacatcgagccggcctgctgccaag
cgcaaggccacctcgatcatggatgacgagtatatccgggagaaccccgagctatatggt
ctgaggcggagttctcgccctacacaaaggcggaagatcgttgagtcggaggatgacgac
gagtcctctgaatccgatgccgccccagcccgtaagacgacgaagaaacgccgcgtggaa
cggtcccagcctgcttccaagcgcggcaccccagctcggcaaccatctatcgacgattca
gattcagatacctatggcggtgccaaggctcgcagcttccagaaaaaggcccgccggcaa
gaactgcaaggcgtccaaagatggtctagccgtcgcgctgcccaagtgtcggctggtacc
tatcaagaaagcgatcttgaagatgaggaagacgaaaatatgacccccggctactgggcc
gctgaggtcgaggataattcgccctacatcgagaagatccttcgtcatcgccccaaaccg
ggcgtcgagatcacgccggatgttacccgacatgatttcgagtacttcatcaagtggcag
ggcaagtcgcacctccataacacctgggagacaaccgagtccgttgccggcttccgcggc
ttccggcgtctggaaaactacttcaagaaggtggttgagtacgagctcgacctgcagttt
ggcggtgacgaaatcacccctgagcagcgcgagcagtggatgctcgaccgggaacgcgaa
gaggaagccctcgaagattacaccaaggtcgagcgtattgttgccgtccgtgatggcgat
gacggccttcagtatttcgtcaagtggaagggcctccagtacgatgagtgtacctgggag
gatgcttcgctcatccagagtcaagcccaggacaagatcgaccagttttacgatcggtcg
acgcgctcctggcagtcggaccgcaagcagtctaacccggagacacgcacccgcatgatg
aagttggagaagcagcccgactacatcaagggcggcgagcttcgcgaattccagatgaag
ggtctcaacttcctcgcccttaactggacgcgtggcaacaatgtcattctggccgacgaa
atgggtctcggcaaaactgttcagacggtgtcattcctgagctggctgcgcaacgatcgt
ggccaggagggtcccttcctcgttgttgccccgctcagtgtgattcctgcttggtgtgat
accttcaacaattgggctccagacctcaactatgtcgtctatctcggcccggaatcggct
cgttcgatcattcgccagtacgagctcttcatcgatggtaacccgaagaagacgaagttt
aacgtcttgctcacctcatatgattacatccttgccgacgcggaccacttgaagcccatc
aagtggcaagtccttgctgttgacgaggctcatcgcctcaagaaccgcgagtctcaacta
tatatcaagctcaacagtttcgggatcccctgtaaagttctcatcactggtacccctatc
caaaacaatcttgccgagctgtccgctcttttggacttcctgaatccaggtaaagttctg
atcgatgacgaactcgaggccttgtcgagtgcggacaacaagggaactggtgatgctgag
caggacgaggcccgacgccagcgcactcaggagaagctgcgcgagcttcaccaggccatt
gctccgtatatcttacgtcgtactaaagaaactgtcgagtccgatcttcctcccaagacg
gagaagatcattcgtgttgagctgtcggacattcagctcgagtattataagaacatcctt
acacgcaactatgccgcgcttcgtgacgccagtggtcacaagcaatctcttctcaacatc
atgatggagctgaagaagatcagcaaccatccttacatgttccaaggcgccgaggagcgt
gtgctcaacggcagcacccgtcgtgaggaccaaatcaagggcctcattaccagcagcggc
aagatgatgctgctcgatcagcttcttgccaagctcaagcgcgatggtcaccgcgtcttg
attttcagtcaaatggtcaagatgctcgacattcttggcgattacctccgcattcgtggt
taccagttccagcggctggacggtactattcctgccggtcctcgccgtatggctattcaa
cacttcaatgctgaagacagcgaggacttttgcttcctgctgtcgactcgtgctggtggt
ctcggcatcaatctaatgactgctgacactgttatcatttacgactccgattggaacccc
caggccgatcttcaggcaatggcacgtgctcatcgtatcggtcagaagaagccagtcaac
gtctatcggttggtctcaaagcagaccattgaggaggaagttgtcacccgcgcgaggaac
aagttgttcctcgagtacctcaccatccaagctggtgtgaccgacgccgagggtaaggcc
ctccgcgaaaaattcaaggagaagggtctgaagttcgacgaggccaagacggccgaagat
atctccatgattctcaagatgcggtctcagaacctcttcgagcagacgggcaaccagcag
aagctggaacagctcgacattgatgccattctggagaacgctgaggttaccaagacggac
attgacgacaagatcaacctcagcactggtggcatcgactgggataactggatgcaggtc
actgatgtcaagctcgacgagaacgcgctcgactgggaccagatcattcctgccgaccag
ctcgcagccatcaaggctgaggaggagaaaaagaagcacgaggagtaccttcagaaggct
atggaagaggctgctcctcggaaggctgctcttaagagcgccaagaagagcgctgaaatc
gagcgtcaggagcgcatcaagaagcgttggcgcgaaagggaggctgaagacctcgaggag
cagcgtgctctgctcactgatccccgtcgtcctcttggcgagaaggagacgcgcaacctc
atccgggcatttttccgctatggcaactttgaggagcgcgaagaggagattgttcatgat
gcccgtcttacggaccgcgatcgtggctacctcaagtccatcattgatgagctcattgag
gtcagcaagaaggcaatcgaggccaacaacgagaagctccgtgaggaagaggccaaggct
ggcaaaccactagccaagaaggacaagaaggctgttctggtcgattttggtgaagtccgc
aagataaatgccgagacggtcattgagcgcccgcctcagctcaagctgctgcgccgtgta
ttgagggagcacgaaaaggagcacggagatgctttgtccttccgtctgccagaggccaca
aaggccgcttcttacacttgtgaatggggtgccagggaagacgccatgctccttgtcggc
attgacaagtacggctttggcgcttggactcagatccgggatgatccgcagctgggcatg
aaagacaagttcttcctggaagagcaccgggttgacaagaaggaggagcgtcgtcgcact
gacgacaagaccatccagtctcctggcgctgtccacctcgtccggcgctccgaatatctc
ctctcggtcttgatggcgaaatactctaatgacgaaaacgccaagaaggccgtggagaat
caccatcgaagcaagaagctcctgacaaacggcatccgccgcagcgagcagaactctgtg
tcggcttctcctgcgccgtctatgtcgaagaaaccttcccagagggatcgcgatcaccat
cggtcctacagcaacgccaacgaccgcggcacgcctaggcccgataagcgtaagtataac
gacgactacgacgatcgcgattccaagcagaggcggcttgacagcgacgccaagcacgac
aagaaggcgaccagtggcaaggatcagaaggagaagcccaaactggaccccgaaactatg
gagcgccttaagcgggagcgtgccagggccgtcgagcggttccatgagcttaccaagatc
ccggacgacaagatcgatcccaatgacaacgtccaggtcgtctggtctattctgcgcccg
ctccaggagaacattgagcggatcatctactccaaggaacgcgtgcccattgcaaaggag
cgtgccaagttcttgggtgccgagattcgtgcctttggtaacttcctgcgcggcctgaag
gagaagaatgggcccaattttgaggggcttgagcagcagttctgggagttcctctccgac
atctggccgctcggtgacgtcaaggtgtcaggcaagcgcctgcaaaagatgtacgtcagc
cttgccgaggccgatcgtcagaaggaggaggaagagaaggcaaaggccaagaaccccgac
ctcgaggatggcgagatcccaagcgaccgtgacgaacctccccgtgaacgcgatcgcgac
caaccatctcgtcgtcccccaccctcgcgtgacccttaccgtgacgaccgccgcgagcag
cgccatgaggaacgtcgcaatgacctcgaccgccgtgccagcgatgtgggctccagcgac
gcgaagcggcgcgcctactacgatgatgacaggctcagcttctaccggcgccgacctgat
ctggctaacaacagtcgggggagctccaacggtggtgggggtagcgggagcagtgtaccg
ttgaggcatcattcgtcttcatcgtggcatcacagtcattccccgccggctaggaggagt
ccgtactag
DBGET
integrated database retrieval system
