KEGG   Thermochaetoides thermophila: CTHT_0060790
Entry
CTHT_0060790      CDS       T03100                                 
Name
(RefSeq) hypothetical protein
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
cthr  Thermochaetoides thermophila
Pathway
cthr03022  Basal transcription factors
cthr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cthr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    CTHT_0060790
  09124 Replication and repair
   03420 Nucleotide excision repair
    CTHT_0060790
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cthr03021]
    CTHT_0060790
   03400 DNA repair and recombination proteins [BR:cthr03400]
    CTHT_0060790
Transcription machinery [BR:cthr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     CTHT_0060790
DNA repair and recombination proteins [BR:cthr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     CTHT_0060790
SSDB
Motif
Pfam: MAT1 zf-C3HC4_5 zf-C3HC4 zf-RING_5 zf-C3HC4_2 MRP-S26 zf-RING_2 zf-RING_16 zf-RING_UBOX zf-C3HC4_3 RING_XB3-XBAT31
Other DBs
NCBI-GeneID: 18260117
NCBI-ProteinID: XP_006696395
UniProt: G0SF48
Structure
LinkDB
Position
Unknown
AA seq 363 aa
MSRPPGFSSGGGLPSLSSDDMCPVCKTIRYLNKDMEFLINPECYHSMCVNCVNRLFNDGP
NQCPYAGCHKTLRRKGFRSAFFSDLSVEREVDIRRRVAAVFNQQEDDFETLRDYNDYLQM
VEDLTFDLVWGSEAKRREAEATLMRWEAEHRAEIERNRKAGREADELHRRRLQAEREAAR
QRRLDALREAEEERRDRARSREAELDALAQAGTQQATDGTAQQRVQLKKRGQAANRAVDA
AVAAAATAGDVGKLSIRGLKEKKKAPVAEGPYDPFGGMEFVPSRYRVREELNHPSLDKYR
IDQQHITGGYSFLDYISRAMFEAFAGLAVFIEDEKEAGIGLSAGEVAGMSAGMAAVGDKM
ELD
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgtcccggcccccaggcttctctagcggcggcggcctgccgtccctttcctccgacgat
atgtgccccgtctgcaaaaccatacgctacctcaacaaagacatggaattcctcatcaac
cccgaatgctaccactcgatgtgcgtgaactgcgtgaaccgactcttcaatgacggaccc
aaccaatgtccctacgcaggctgccacaaaactctccgccgcaaaggtttccgctccgcc
ttcttcagcgatctctccgtggagcgtgaggtcgacatccggcggcgagtcgcagccgtc
ttcaaccagcaggaagacgacttcgagacgttacgggactataacgattacctgcagatg
gtggaggatctgacgtttgatttagtctgggggagtgaagcgaagaggcgcgaggcggag
gcaacgcttatgcgctgggaggcggagcatcgggccgagatcgagcgcaataggaaagcc
ggtcgcgaggccgacgagctgcatcggcggcggttacaagctgagcgtgaagcagcgcgc
cagcgccgcctggatgccctccgcgaagcggaagaagaacgtcgcgaccgtgcaagaagt
cgcgaagcggagctcgacgccctggcccaagccggcacgcagcaagcaaccgacggcaca
gcacagcaaagagtccagctcaagaagcgtgggcaggcagcgaaccgtgccgtggacgca
gccgttgctgctgctgccaccgcaggcgatgtagggaagttatcgatccggggcctcaag
gagaagaagaaggctcccgtggcggagggcccatacgatccgttcggcgggatggaattc
gttccgagccggtatcgtgttcgcgaggagctgaatcatccttcgttggacaagtaccgg
atcgatcagcagcatattacgggcgggtacagtttcttagactacatttcaagggcgatg
ttcgaggcgtttgcgggattggcggtgtttattgaggatgagaaggaggcgggtattggg
ttgtctgcgggagaggtggcgggaatgagtgctgggatggcggccgtgggggacaagatg
gagcttgactga

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