Thermochaetoides thermophila: CTHT_0060790
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Entry
CTHT_0060790 CDS
T03100
Name
(RefSeq) hypothetical protein
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
cthr
Thermochaetoides thermophila
Pathway
cthr03022
Basal transcription factors
cthr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CTHT_0060790
09124 Replication and repair
03420 Nucleotide excision repair
CTHT_0060790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cthr03021
]
CTHT_0060790
03400 DNA repair and recombination proteins [BR:
cthr03400
]
CTHT_0060790
Transcription machinery [BR:
cthr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CTHT_0060790
DNA repair and recombination proteins [BR:
cthr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CTHT_0060790
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-C3HC4
zf-RING_5
zf-C3HC4_2
MRP-S26
zf-RING_2
zf-RING_16
zf-RING_UBOX
zf-C3HC4_3
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
18260117
NCBI-ProteinID:
XP_006696395
UniProt:
G0SF48
Structure
PDB
PDBj
LinkDB
All DBs
Position
Unknown
AA seq
363 aa
AA seq
DB search
MSRPPGFSSGGGLPSLSSDDMCPVCKTIRYLNKDMEFLINPECYHSMCVNCVNRLFNDGP
NQCPYAGCHKTLRRKGFRSAFFSDLSVEREVDIRRRVAAVFNQQEDDFETLRDYNDYLQM
VEDLTFDLVWGSEAKRREAEATLMRWEAEHRAEIERNRKAGREADELHRRRLQAEREAAR
QRRLDALREAEEERRDRARSREAELDALAQAGTQQATDGTAQQRVQLKKRGQAANRAVDA
AVAAAATAGDVGKLSIRGLKEKKKAPVAEGPYDPFGGMEFVPSRYRVREELNHPSLDKYR
IDQQHITGGYSFLDYISRAMFEAFAGLAVFIEDEKEAGIGLSAGEVAGMSAGMAAVGDKM
ELD
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggcccccaggcttctctagcggcggcggcctgccgtccctttcctccgacgat
atgtgccccgtctgcaaaaccatacgctacctcaacaaagacatggaattcctcatcaac
cccgaatgctaccactcgatgtgcgtgaactgcgtgaaccgactcttcaatgacggaccc
aaccaatgtccctacgcaggctgccacaaaactctccgccgcaaaggtttccgctccgcc
ttcttcagcgatctctccgtggagcgtgaggtcgacatccggcggcgagtcgcagccgtc
ttcaaccagcaggaagacgacttcgagacgttacgggactataacgattacctgcagatg
gtggaggatctgacgtttgatttagtctgggggagtgaagcgaagaggcgcgaggcggag
gcaacgcttatgcgctgggaggcggagcatcgggccgagatcgagcgcaataggaaagcc
ggtcgcgaggccgacgagctgcatcggcggcggttacaagctgagcgtgaagcagcgcgc
cagcgccgcctggatgccctccgcgaagcggaagaagaacgtcgcgaccgtgcaagaagt
cgcgaagcggagctcgacgccctggcccaagccggcacgcagcaagcaaccgacggcaca
gcacagcaaagagtccagctcaagaagcgtgggcaggcagcgaaccgtgccgtggacgca
gccgttgctgctgctgccaccgcaggcgatgtagggaagttatcgatccggggcctcaag
gagaagaagaaggctcccgtggcggagggcccatacgatccgttcggcgggatggaattc
gttccgagccggtatcgtgttcgcgaggagctgaatcatccttcgttggacaagtaccgg
atcgatcagcagcatattacgggcgggtacagtttcttagactacatttcaagggcgatg
ttcgaggcgtttgcgggattggcggtgtttattgaggatgagaaggaggcgggtattggg
ttgtctgcgggagaggtggcgggaatgagtgctgggatggcggccgtgggggacaagatg
gagcttgactga
DBGET
integrated database retrieval system