Thermochaetoides thermophila: CTHT_0061440
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Entry
CTHT_0061440 CDS
T03100
Name
(RefSeq) hypothetical protein
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
cthr
Thermochaetoides thermophila
Pathway
cthr03020
RNA polymerase
cthr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CTHT_0061440
09124 Replication and repair
03420 Nucleotide excision repair
CTHT_0061440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cthr03021
]
CTHT_0061440
03400 DNA repair and recombination proteins [BR:
cthr03400
]
CTHT_0061440
Transcription machinery [BR:
cthr03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
CTHT_0061440
DNA repair and recombination proteins [BR:
cthr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
CTHT_0061440
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
18260182
NCBI-ProteinID:
XP_006696460
UniProt:
G0SFB3
LinkDB
All DBs
Position
Unknown
AA seq
146 aa
AA seq
DB search
MAFTNFRHSDNLQTGFELFLLAEGEKKITEKVVTGMANTSDFIILKEDHTIGNLLSEHLK
QAPHVMMAGYKIGHPNVPEVLVRVQTDGTITPREALVNVCKQLVAAYGQLGREFQKELAL
RQYADQGAGAADAAAGAIGGTGQNGF
NT seq
441 nt
NT seq
+upstream
nt +downstream
nt
atggctttcaccaacttccgtcacagcgataacctgcagaccgggtttgagctttttctc
ctcgccgagggcgagaagaagatcaccgagaaggttgtcactggtatggccaacacgtcc
gacttcatcatcttgaaggaagaccataccatcggcaacctactgagcgagcacctcaag
caggccccccacgtcatgatggcgggctacaagattggccatcccaacgtgcctgaggtc
ctcgttcgcgtgcagacggatggcacgatcacgccccgagaggcgttggtgaatgtctgc
aagcagctggttgccgcctacggccaactgggtcgcgagttccagaaggaacttgcactg
cgccaatacgcagaccagggtgctggcgcagccgatgccgcggcgggcgctatcggtggt
actgggcagaacggtttctga
DBGET
integrated database retrieval system
