KEGG   Thermochaetoides thermophila: CTHT_0062040
Entry
CTHT_0062040      CDS       T03100                                 
Name
(RefSeq) RNA polymerase II elongator-like protein
  KO
K11374  elongator complex protein 2
Organism
cthr  Thermochaetoides thermophila
Brite
KEGG Orthology (KO) [BR:cthr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cthr03016]
    CTHT_0062040
Transfer RNA biogenesis [BR:cthr03016]
 Eukaryotic type
  tRNA modification factors
   Elongator complex
    CTHT_0062040
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_2nd WDR55 Beta-prop_EML WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_1st ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_WDR41 Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_1st NBCH_WD40 Beta-prop_DCAF12 Tab2-like_C
Other DBs
NCBI-GeneID: 18260242
NCBI-ProteinID: XP_006696520
UniProt: G0SE12
LinkDB
Position
Unknown
AA seq 858 aa
MAQDNARDIVQSRYLSAGANRYAWAADWGDDGIVAFGSDTNVCLWNPSNSAGISHILSGH
TAHVRAVRFVPKADGDQFSYLITGSDDKSLRVWAINSRDAGASCVQTVQEHTEPINCIAV
LRVPGFGNGLGSRSIVATGAADATVKIWTLDPTTGQLALLQTIRTVKRYMPLAVAFYPLN
KQGTEVILAVAGTTNVVHIYTSSTVDGDAPVTEFTLQATLPGHENWIRSLDFIREKKEAG
SDLLLASASQDKYIRLWRIHQGSPLSALSSTGLDLSVDSLMPGQKLHKVTAGSTKYCIMF
EALLLGHEDWIYTARWSRSPSSNKLQLLSASADNTLAIWEADPDSGIWLTIARMGEVSRE
KGATTATGSIGGFWTGLWSPSGTTVITLGRTGSWRRWDYDPNEDTWKQHFAVSGHTRAVT
GISWSPDGVYLLSASSDQTTRLHAEWTRGGEGSDNSWHEMARPQIHGYDLNCIGTLSNTS
FVSGADEKLMRVFTEPKAVAQMLARLTDASPEAANAAPDAANIPVLGLSNKAVEVVDDSA
DPTAPLPAQDTVIDPSNPLTSREDAFDPATTIRASALAISHPPFEESLSRHTLWPEIEKL
YGHGYELSCLATSHDGGVIASACKASSLNHAVIRLFETKTWTEVKPPLAAHSLTVTKVRF
SYPDDRLLLSVGRDRQWVVFERESDEEANGAKKYKYKQIQANAKGHSRMILDCAWAPVVR
LGEDGNETRLFATAGRDRSVKLWIRRAGEGEFVQAAAIPQEHPVTALDFVPEFTEDGLIL
LAVGTEAGRLLVVSLKVVSGEEGKGDVEIVSTLNVPAKLCLPKAVMQLAWRPRRERQKGR
ELAIAGEDGSLRIYRFGL
NT seq 2577 nt   +upstreamnt  +downstreamnt
atggctcaagacaacgcaagagacattgtgcaaagccgctacctgtcggctggcgcaaac
agatacgcttgggcagcagactggggcgatgatgggattgtcgcctttggctcagacacg
aatgtttgtctgtggaatccctcgaattcagccggcatatcacacatcctaagtggtcat
acagctcatgttagggctgtcaggttcgtaccgaaggcagatggggaccagtttagctac
ttgatcaccggcagtgatgacaagtcgctgagggtttgggccatcaactcacgagatgcc
ggcgcttcctgcgttcagaccgttcaagaacacacagagcctatcaattgcatagctgtc
ctacgagttccagggtttggcaatggtttaggatcaagatccattgtcgccacgggggct
gcagatgctaccgtaaagatttggaccttggacccgacaacaggacaacttgcgctgttg
cagacaatcagaactgtcaagagatacatgccattggcagtcgccttttaccccctaaac
aagcaaggaaccgaagtcatcttagcggttgcgggcactaccaacgttgtccatatctac
acttcctcaaccgtggacggggatgcacctgttaccgagttcacccttcaggctacattg
cccggccatgagaactggattcgttcccttgacttcatccgtgaaaagaaggaggcaggc
agtgacctactcctcgcgtcagccagccaggacaaatacatccgtctctggcggattcac
cagggcagtcctctatcagccctgagttcaaccggcctggatctctcagttgactccctg
atgccaggccagaagctccacaaagtcactgctggtagcaccaaatactgcatcatgttc
gaagcccttctcctcggccacgaagactggatctacaccgcccgctggtcccgctcccct
tccagcaacaagctccaacttctctccgcctcagcggacaacaccctcgcgatctgggaa
gcggaccccgactccggcatctggctcacgatcgcccgaatgggcgaagtcagccgcgag
aaaggcgctaccacagccacaggcagcatcggcgggttctggacgggcctgtggtccccc
tctggcacaacggtcatcaccctaggccgcaccggcagctggcggagatgggactatgat
ccgaacgaagacacctggaaacaacacttcgctgtctcaggccacactcgcgcggtaacg
ggtatctcctggtcccctgacggggtgtacctcctctcagccagctccgaccaaacgacc
cgtttgcatgccgaatggacgcgcggaggcgagggaagcgataacagctggcatgagatg
gcgcgcccccaaattcacggctacgaccttaactgcatcggcacgctgagcaacacctcc
ttcgtctccggcgcagacgaaaagctcatgcgcgtgttcaccgagcccaaggccgtggcg
caaatgctcgcccgtttgacagacgcgtctcccgaggctgccaatgccgcccctgatgca
gcaaacatccccgtgcttgggctgtccaataaagccgtcgaggtagtcgacgactctgcc
gacccgactgctcctcttccagcacaagatacagtcatcgacccgagcaaccccctcacc
tcgcgggaagacgccttcgacccggcgacaaccatccgcgcgtcggcgctcgcaatctcc
caccctccgtttgaagagtctctttctcgacacacgctctggcccgagatcgagaagctc
tacgggcacgggtacgagctttcctgtctcgcgacaagccatgatggcggggtgattgcc
agcgcgtgtaaagcgtcatcgctgaaccacgctgtgataaggctatttgagactaaaacc
tggacggaggtaaagccgccgttagcggcgcatagtttgacggtgacgaaagtaaggttt
tcataccctgatgacaggttactgttgagtgtcgggagagataggcagtgggttgtgttt
gagcgtgaatcggacgaagaagcgaacggggcgaagaagtacaagtataagcagatccaa
gccaacgcgaaggggcacagcaggatgattttggactgtgcctgggcgccggttgtccgt
cttggcgaggacggcaatgaaacaagactgtttgccaccgctggacgcgacaggagcgtc
aagctttggatccgacgtgccggtgagggggaatttgttcaggctgcggctatcccacag
gagcacccagtcacagcgctggatttcgtgccggagttcacggaggatgggttgattctt
ttggcggtgggtactgaggcgggtaggctgcttgtggtgtctctgaaggtagtttccggc
gaggagggcaagggcgatgttgagattgtgtcgacgctaaatgttccggcgaagttgtgt
cttcccaaggctgtgatgcagctggcgtggcggccgaggagggagcggcagaaggggcgg
gagctggcgattgcgggggaggatgggtcgttgaggatatataggtttgggttgtga

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