KEGG   Thermochaetoides thermophila: CTHT_0062490
Entry
CTHT_0062490      CDS       T03100                                 
Name
(RefSeq) hypothetical protein
  KO
K14411  RNA-binding protein Musashi
Organism
cthr  Thermochaetoides thermophila
Pathway
cthr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cthr00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    CTHT_0062490
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cthr03019]
    CTHT_0062490
Messenger RNA biogenesis [BR:cthr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     CTHT_0062490
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2
Other DBs
NCBI-GeneID: 18260287
NCBI-ProteinID: XP_006696563
UniProt: G0SE55
LinkDB
Position
Unknown
AA seq 700 aa
MTEPENFDDELFADLYNDDEPAKPATASVTDQQAAIRSIAESNDYRAADTSQTQTLNGAD
NPPENNDDDDGEEEDDDDDIDFNLGDGPSTTITTHASNDYKEEKPAQAAPPVPAAPSKGP
NAKEDGIAIIIIIGNLHLRCAILLISGNCCSVLHLHRIQPRAVFHPLKERIRSMLDNNRF
RHAFSAGFIATPSRAVWCPPHANSPALFPSSSCPYQLQVAIAIAKKMFIGGLNWETTDES
LRNYFSQFGEVVECTVMRDSATGRSRGFGFLTFKDPKVVNIVMVKEHYLDGKIIDPKRAI
PRDEQEKTSKIFVGGVSPETTDHEFREYFSQFGRVVDATLMMDKDTGRPRGFGFVTFESE
AGVEACLNAKLELHGKPIEVKKAQPRGNLRDDEDARRGKFGRKGQGIGGIDDALNTGMGG
MAGMSAAAGMTPQLMAQYIARMQQAFAMMQQQMMMNRNMNPAMMQWMQMQQMMAAQAGRG
GPGMNPMMGGMNPAMMQQMQQMMNQQAGGPGPMPQQGGPGGPGGPGGSGPNAGGANQNQS
QGPSGPGGSSSGGPNRPGGYNGYEQQQQYDQQQPSQQQQGLPPRRGGGRDMHGGYNQGYG
PMGPGGPTSWEGMYDDVPQPVMNQPPGPAGGGYGRGGGFHHKGNRGHHQMGGPPMMGPVD
PNNAPPANAPTGPKNAGKPGANYRGGGRGGNRGFHPYARN
NT seq 2103 nt   +upstreamnt  +downstreamnt
atgacggaacccgagaacttcgatgacgagctgttcgctgatctttacaacgacgatgag
ccagcgaagccagcgactgcctcagtgaccgatcagcaggccgctatccggtctatcgct
gagagcaacgactatcgtgccgcagacactagtcaaacccaaaccttgaatggggctgac
aaccccccagagaacaacgatgatgacgatggggaagaagaagacgatgacgacgacatc
gactttaaccttggcgatggcccgtcgactacaatcaccacccacgccagtaacgattac
aaagaggagaaaccagctcaagctgcaccgcctgtgcctgctgctccgtccaagggcccg
aatgccaaggaagatggcatcgccatcatcatcatcattggcaacctgcacctgcgctgc
gctattcttctcattagtgggaactgctgtagcgtgctccatctgcaccggattcaacca
cgggcggtctttcaccctttgaaagagcgtatacgcagtatgctcgacaacaaccgcttt
cgacacgccttctccgccggctttatcgctacgccgtcaagggccgtctggtgcccgccg
cacgccaactctccagcgctattcccatcatcttcctgtccctatcagttgcaggtggcc
atcgccattgccaagaaaatgtttattggtggcttgaactgggagacgacagatgagtcc
ttgaggaactatttctctcagtttggagaggtcgttgagtgtaccgttatgagggatagt
gccactggtcgctctcgtggcttcggcttcctgacattcaaggaccccaaggtggtcaac
attgttatggtgaaagagcattatcttgacggcaagattatcgaccccaagagagctatc
cctcgcgacgaacaagagaagacatccaagatttttgtcggtggcgtcagtccggaaacg
acagatcatgagttccgcgagtatttctctcagtttggtcgagtcgtcgacgctaccctt
atgatggacaaggacactggccgtccgcgcggtttcggcttcgttacctttgaaagcgag
gctggtgtcgaggcctgtctgaacgcgaagctcgagcttcacgggaaaccgatcgaagtg
aaaaaggctcagccccgcggcaacttgcgcgacgacgaagacgcgcgtcgcggcaagttt
ggccgcaaaggtcagggcattggcggtattgatgacgctttgaacacaggcatgggcggt
atggcaggcatgagtgccgcagccggcatgacgccacagctcatggcgcagtatattgcc
cgtatgcagcaggcttttgcgatgatgcagcagcagatgatgatgaaccgaaatatgaat
cctgccatgatgcagtggatgcagatgcaacagatgatggccgcccaagcaggccgtggc
ggtccaggaatgaatcctatgatgggtggcatgaatcctgccatgatgcagcaaatgcaa
caaatgatgaaccagcaggccggcggtcctggtccaatgccccaacaaggcggtcctgga
ggccctggtggtcctggtggcagcggccccaacgccggcggcgccaaccagaatcaatct
cagggtccttctggtcctggtggttccagcagtggcggtcccaatcgtcctggcggctac
aacggctacgaacaacagcagcaatatgatcagcagcaaccgtcacagcagcaacaaggt
cttccccctcgtcgtggtgggggccgtgacatgcatgggggctacaaccaaggttacggc
cctatgggtcctggaggccctactagttgggagggcatgtacgacgatgtccctcagccg
gtcatgaatcagcctcccggccctgctggtggcggctatggccgtggtggtggcttccac
cacaagggtaaccgcggccatcaccaaatgggcggacctccgatgatgggccctgtcgac
ccgaacaatgcacctccagcaaatgcccccacgggcccaaagaacgctggcaagcctggc
gcgaactatcgcggaggtggacggggtgggaaccgtgggttccatccttatgccagaaac
tag

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